RNA–Protein interactions for RNA: ENST00000512056.1

RAPGEF2-211, Transcript of Rap guanine nucleotide exchange factor 2, humanhuman

TSL 2

Gene RAPGEF2, Length 723 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF2-211ENST00000512056 AEBP2Q6ZN18 517 aaPredicted RBP28.56■■■□□ 2.16
RAPGEF2-211ENST00000512056 CHIC1Q5VXU3 224 aa26.62■■□□□ 1.85
RAPGEF2-211ENST00000512056 SENP3Q9H4L4 574 aaPredicted RBP24.34■■□□□ 1.49
RAPGEF2-211ENST00000512056 PHF23Q9BUL5 403 aaPredicted RBP23.99■■□□□ 1.43
RAPGEF2-211ENST00000512056 FOXD1Q16676 465 aa22.81■■□□□ 1.24
RAPGEF2-211ENST00000512056 POTEDQ86YR6 584 aa22.22■■□□□ 1.15
RAPGEF2-211ENST00000512056 MSH5O43196 834 aa21.48■■□□□ 1.03
RAPGEF2-211ENST00000512056 PLPPR3Q6T4P5 718 aa21.35■■□□□ 1.01
RAPGEF2-211ENST00000512056 PIAS4Q8N2W9 510 aaPredicted RBP21.15■□□□□ 0.98
RAPGEF2-211ENST00000512056 PPP6R1Q9UPN7 881 aa20.96■□□□□ 0.95
RAPGEF2-211ENST00000512056 ADRA2BP18089 450 aa20.83■□□□□ 0.93
RAPGEF2-211ENST00000512056 MAPK8IP2Q13387 824 aaPredicted RBP19.31■□□□□ 0.68
RAPGEF2-211ENST00000512056 DMRT2Q9Y5R5 561 aa19.25■□□□□ 0.67
RAPGEF2-211ENST00000512056 SCAF1Q9H7N4 1312 aaKnown RBP18.95■□□□□ 0.62
RAPGEF2-211ENST00000512056 PPP4R3CPQ6ZMV5 832 aa18.81■□□□□ 0.6
RAPGEF2-211ENST00000512056 CACNB1Q02641 598 aaPredicted RBP18.77■□□□□ 0.6
RAPGEF2-211ENST00000512056 DCAF8L1A6NGE4 600 aa18.45■□□□□ 0.54
RAPGEF2-211ENST00000512056 HOXD11P31277 338 aaPredicted RBP18.34■□□□□ 0.53
RAPGEF2-211ENST00000512056 CNKSR2Q8WXI2 1034 aa18.34■□□□□ 0.53
RAPGEF2-211ENST00000512056 RNF39Q9H2S5 420 aa18.33■□□□□ 0.52
RAPGEF2-211ENST00000512056 RNF216Q9NWF9 866 aaPredicted RBP18.09■□□□□ 0.49
RAPGEF2-211ENST00000512056 NCBP3Q53F19 620 aaKnown RBP18.08■□□□□ 0.48
RAPGEF2-211ENST00000512056 C1QBPQ07021 282 aaKnown RBP17.98■□□□□ 0.47
RAPGEF2-211ENST00000512056 NPM3O75607 178 aaKnown RBP17.95■□□□□ 0.46
RAPGEF2-211ENST00000512056 KCNA4P22459 653 aa17.93■□□□□ 0.46
RAPGEF2-211ENST00000512056 DNAJC5BQ9UF47 199 aa17.77■□□□□ 0.44
RAPGEF2-211ENST00000512056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.43■□□□□ 0.38
RAPGEF2-211ENST00000512056 POTEHQ6S545 545 aa17.2■□□□□ 0.34
RAPGEF2-211ENST00000512056 SLC4A2P04920 1241 aa17.1■□□□□ 0.33
RAPGEF2-211ENST00000512056 U3KPZ7 1027 aaPredicted RBP17.07■□□□□ 0.32
RAPGEF2-211ENST00000512056 DSG3P32926 999 aa16.99■□□□□ 0.31
RAPGEF2-211ENST00000512056 SPINK5Q9NQ38 1064 aaPredicted RBP16.99■□□□□ 0.31
RAPGEF2-211ENST00000512056 CAPN15O75808 1086 aa16.92■□□□□ 0.3
RAPGEF2-211ENST00000512056 SLC4A1APQ9BWU0 796 aaKnown RBP16.91■□□□□ 0.3
RAPGEF2-211ENST00000512056 ZBTB22O15209 634 aa16.55■□□□□ 0.24
RAPGEF2-211ENST00000512056 FOXD4L1Q9NU39 408 aa16.54■□□□□ 0.24
RAPGEF2-211ENST00000512056 TRHP20396 242 aaPredicted RBP16.53■□□□□ 0.24
RAPGEF2-211ENST00000512056 ABCB7O75027 752 aa16.52■□□□□ 0.24
RAPGEF2-211ENST00000512056 MYCNP04198 464 aaPredicted RBP16.52■□□□□ 0.24
RAPGEF2-211ENST00000512056 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.49■□□□□ 0.23
RAPGEF2-211ENST00000512056 HNRNPUL2Q1KMD3 747 aaKnown RBP16.49■□□□□ 0.23
RAPGEF2-211ENST00000512056 ZNF219Q9P2Y4 722 aaPredicted RBP16.46■□□□□ 0.23
RAPGEF2-211ENST00000512056 SAMD1Q6SPF0 538 aaPredicted RBP16.45■□□□□ 0.22
RAPGEF2-211ENST00000512056 APLP2Q06481 763 aa16.41■□□□□ 0.22
RAPGEF2-211ENST00000512056 ATF5Q9Y2D1 282 aaPredicted RBP16.26■□□□□ 0.19
RAPGEF2-211ENST00000512056 RBM42Q9BTD8 480 aaKnown RBP16.15■□□□□ 0.18
RAPGEF2-211ENST00000512056 CHRDL2Q6WN34 429 aa16.06■□□□□ 0.16
RAPGEF2-211ENST00000512056 POLA2Q14181 598 aa16.04■□□□□ 0.16
RAPGEF2-211ENST00000512056 CSRNP3Q8WYN3 585 aa16.03■□□□□ 0.16
RAPGEF2-211ENST00000512056 ATXN8OSP0DMR3 200 aa15.96■□□□□ 0.15
RAPGEF2-211ENST00000512056 EHMT2Q96KQ7 1210 aa15.96■□□□□ 0.15
RAPGEF2-211ENST00000512056 SP7Q8TDD2 431 aaPredicted RBP15.75■□□□□ 0.11
RAPGEF2-211ENST00000512056 AKT1S1Q96B36 256 aa15.7■□□□□ 0.1
RAPGEF2-211ENST00000512056 ZBTB12Q9Y330 459 aaPredicted RBP15.63■□□□□ 0.09
RAPGEF2-211ENST00000512056 PIP4P2Q8N4L2 257 aa15.59■□□□□ 0.09
RAPGEF2-211ENST00000512056 REM2Q8IYK8 340 aaPredicted RBP15.58■□□□□ 0.08
RAPGEF2-211ENST00000512056 OSCARQ8IYS5 282 aa15.54■□□□□ 0.08
RAPGEF2-211ENST00000512056 MKRN4PQ13434 485 aaPredicted RBP15.51■□□□□ 0.07
RAPGEF2-211ENST00000512056 PITPNM1O00562 1244 aa15.44■□□□□ 0.06
RAPGEF2-211ENST00000512056 FBLN2P98095 1184 aa15.41■□□□□ 0.06
RAPGEF2-211ENST00000512056 HAX1O00165 279 aa15.4■□□□□ 0.06
RAPGEF2-211ENST00000512056 FXR2P51116 673 aaKnown RBP eCLIP15.4■□□□□ 0.06
RAPGEF2-211ENST00000512056 EVX2Q03828 476 aa15.26■□□□□ 0.03
RAPGEF2-211ENST00000512056 SPDYE2BA6NHP3 402 aa15.24■□□□□ 0.03
RAPGEF2-211ENST00000512056 SPDYE6P0CI01 402 aa15.24■□□□□ 0.03
RAPGEF2-211ENST00000512056 SPDYE2Q495Y8 402 aa15.24■□□□□ 0.03
RAPGEF2-211ENST00000512056 SSUH2Q9Y2M2 353 aa15.13■□□□□ 0.01
RAPGEF2-211ENST00000512056 ZNF692Q9BU19 519 aaPredicted RBP15.12■□□□□ 0.01
RAPGEF2-211ENST00000512056 PRKAR2AP13861 404 aaKnown RBP15.01□□□□□ -0.01
RAPGEF2-211ENST00000512056 PABPN1Q86U42 306 aaKnown RBP eCLIP14.94□□□□□ -0.02
RAPGEF2-211ENST00000512056 C19orf67A6NJJ6 358 aa14.93□□□□□ -0.02
RAPGEF2-211ENST00000512056 CLEC11AQ9Y240 323 aa14.93□□□□□ -0.02
RAPGEF2-211ENST00000512056 SPDYE1Q8NFV5 336 aaPredicted RBP14.91□□□□□ -0.02
RAPGEF2-211ENST00000512056 SPDYE4A6NLX3 237 aa14.84□□□□□ -0.03
RAPGEF2-211ENST00000512056 GABBR2O75899 941 aa14.84□□□□□ -0.03
RAPGEF2-211ENST00000512056 CHADLQ6NUI6 762 aa14.77□□□□□ -0.05
RAPGEF2-211ENST00000512056 LHX8Q68G74 356 aa14.75□□□□□ -0.05
RAPGEF2-211ENST00000512056 PRR29P0C7W0 189 aa14.65□□□□□ -0.06
RAPGEF2-211ENST00000512056 PLSCR2Q9NRY7 297 aa14.62□□□□□ -0.07
RAPGEF2-211ENST00000512056 PROM2Q8N271 834 aa14.59□□□□□ -0.07
RAPGEF2-211ENST00000512056 POTEIP0CG38 1075 aa14.57□□□□□ -0.08
RAPGEF2-211ENST00000512056 CD44P16070 742 aaKnown RBP14.5□□□□□ -0.09
RAPGEF2-211ENST00000512056 STAG3Q9UJ98 1225 aa14.5□□□□□ -0.09
RAPGEF2-211ENST00000512056 FKBP8Q14318 412 aa14.46□□□□□ -0.09
RAPGEF2-211ENST00000512056 FARP1Q9Y4F1 1045 aaPredicted RBP14.45□□□□□ -0.1
RAPGEF2-211ENST00000512056 CREBZFQ9NS37 354 aa14.44□□□□□ -0.1
RAPGEF2-211ENST00000512056 CLCN6P51797 869 aa14.33□□□□□ -0.12
RAPGEF2-211ENST00000512056 MNX1P50219 401 aaPredicted RBP14.27□□□□□ -0.13
RAPGEF2-211ENST00000512056 DCBLD2Q96PD2 775 aa14.27□□□□□ -0.13
RAPGEF2-211ENST00000512056 ZNF579Q8NAF0 562 aaKnown RBP14.25□□□□□ -0.13
RAPGEF2-211ENST00000512056 ZRANB1Q9UGI0 708 aa14.2□□□□□ -0.14
RAPGEF2-211ENST00000512056 GALR2O43603 387 aaPredicted RBP14.15□□□□□ -0.14
RAPGEF2-211ENST00000512056 OTUD5Q96G74 571 aa14.1□□□□□ -0.15
RAPGEF2-211ENST00000512056 MIER1Q8N108 512 aa14.09□□□□□ -0.15
RAPGEF2-211ENST00000512056 POTEB2H3BUK9 544 aa14.08□□□□□ -0.16
RAPGEF2-211ENST00000512056 NPM1P06748 294 aaKnown RBP eCLIP14.06□□□□□ -0.16
RAPGEF2-211ENST00000512056 PLCD3Q8N3E9 789 aa14.01□□□□□ -0.17
RAPGEF2-211ENST00000512056 PHF12Q96QT6 1004 aa14□□□□□ -0.17
RAPGEF2-211ENST00000512056 FBXO3Q9UK99 471 aa13.96□□□□□ -0.17
RAPGEF2-211ENST00000512056 PLEKHG5O94827 1062 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms