RNA–Protein interactions for RNA: ENST00000511400.1

GIN1-204, Transcript of gypsy retrotransposon integrase 1, humanhuman

TSL 4

Gene GIN1, Length 549 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1-204ENST00000511400 AEBP2Q6ZN18 517 aaPredicted RBP27.12■■□□□ 1.93
GIN1-204ENST00000511400 CHIC1Q5VXU3 224 aa25.66■■□□□ 1.7
GIN1-204ENST00000511400 SENP3Q9H4L4 574 aaPredicted RBP22.94■■□□□ 1.26
GIN1-204ENST00000511400 PHF23Q9BUL5 403 aaPredicted RBP22.75■■□□□ 1.23
GIN1-204ENST00000511400 FOXD1Q16676 465 aa21.51■■□□□ 1.03
GIN1-204ENST00000511400 PLPPR3Q6T4P5 718 aa20.43■□□□□ 0.86
GIN1-204ENST00000511400 PPP6R1Q9UPN7 881 aa20.2■□□□□ 0.82
GIN1-204ENST00000511400 ADRA2BP18089 450 aa20.09■□□□□ 0.81
GIN1-204ENST00000511400 PIAS4Q8N2W9 510 aaPredicted RBP20.02■□□□□ 0.8
GIN1-204ENST00000511400 MSH5O43196 834 aa19.97■□□□□ 0.79
GIN1-204ENST00000511400 POTEDQ86YR6 584 aa19.61■□□□□ 0.73
GIN1-204ENST00000511400 MAPK8IP2Q13387 824 aaPredicted RBP18.5■□□□□ 0.55
GIN1-204ENST00000511400 DMRT2Q9Y5R5 561 aa18.25■□□□□ 0.51
GIN1-204ENST00000511400 SCAF1Q9H7N4 1312 aaKnown RBP18.19■□□□□ 0.5
GIN1-204ENST00000511400 PPP4R3CPQ6ZMV5 832 aa17.99■□□□□ 0.47
GIN1-204ENST00000511400 HOXD11P31277 338 aaPredicted RBP17.59■□□□□ 0.41
GIN1-204ENST00000511400 CNKSR2Q8WXI2 1034 aa17.58■□□□□ 0.4
GIN1-204ENST00000511400 DCAF8L1A6NGE4 600 aa17.47■□□□□ 0.39
GIN1-204ENST00000511400 RNF216Q9NWF9 866 aaPredicted RBP17.43■□□□□ 0.38
GIN1-204ENST00000511400 CACNB1Q02641 598 aaPredicted RBP17.18■□□□□ 0.34
GIN1-204ENST00000511400 NCBP3Q53F19 620 aaKnown RBP17.17■□□□□ 0.34
GIN1-204ENST00000511400 RNF39Q9H2S5 420 aa17.13■□□□□ 0.33
GIN1-204ENST00000511400 NPM3O75607 178 aaKnown RBP17.07■□□□□ 0.32
GIN1-204ENST00000511400 DNAJC5BQ9UF47 199 aa16.89■□□□□ 0.29
GIN1-204ENST00000511400 C1QBPQ07021 282 aaKnown RBP16.82■□□□□ 0.28
GIN1-204ENST00000511400 KCNA4P22459 653 aa16.78■□□□□ 0.28
GIN1-204ENST00000511400 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.71■□□□□ 0.27
GIN1-204ENST00000511400 U3KPZ7 1027 aaPredicted RBP16.44■□□□□ 0.22
GIN1-204ENST00000511400 SLC4A2P04920 1241 aa16.35■□□□□ 0.21
GIN1-204ENST00000511400 SPINK5Q9NQ38 1064 aaPredicted RBP16.24■□□□□ 0.19
GIN1-204ENST00000511400 CAPN15O75808 1086 aa16.1■□□□□ 0.17
GIN1-204ENST00000511400 DSG3P32926 999 aa16.07■□□□□ 0.16
GIN1-204ENST00000511400 TRHP20396 242 aaPredicted RBP15.88■□□□□ 0.13
GIN1-204ENST00000511400 ABCB7O75027 752 aa15.8■□□□□ 0.12
GIN1-204ENST00000511400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.79■□□□□ 0.12
GIN1-204ENST00000511400 HNRNPUL2Q1KMD3 747 aaKnown RBP15.79■□□□□ 0.12
GIN1-204ENST00000511400 APLP2Q06481 763 aa15.76■□□□□ 0.11
GIN1-204ENST00000511400 SLC4A1APQ9BWU0 796 aaKnown RBP15.76■□□□□ 0.11
GIN1-204ENST00000511400 SAMD1Q6SPF0 538 aaPredicted RBP15.75■□□□□ 0.11
GIN1-204ENST00000511400 ZNF219Q9P2Y4 722 aaPredicted RBP15.75■□□□□ 0.11
GIN1-204ENST00000511400 MYCNP04198 464 aaPredicted RBP15.69■□□□□ 0.1
GIN1-204ENST00000511400 FOXD4L1Q9NU39 408 aa15.56■□□□□ 0.08
GIN1-204ENST00000511400 ATF5Q9Y2D1 282 aaPredicted RBP15.51■□□□□ 0.07
GIN1-204ENST00000511400 ZBTB22O15209 634 aa15.48■□□□□ 0.07
GIN1-204ENST00000511400 POLA2Q14181 598 aa15.47■□□□□ 0.07
GIN1-204ENST00000511400 POTEHQ6S545 545 aa15.33■□□□□ 0.04
GIN1-204ENST00000511400 RBM42Q9BTD8 480 aaKnown RBP15.18■□□□□ 0.02
GIN1-204ENST00000511400 ATXN8OSP0DMR3 200 aa15.04■□□□□ -0
GIN1-204ENST00000511400 ZBTB12Q9Y330 459 aaPredicted RBP15□□□□□ -0.01
GIN1-204ENST00000511400 OSCARQ8IYS5 282 aa14.97□□□□□ -0.01
GIN1-204ENST00000511400 CHRDL2Q6WN34 429 aa14.94□□□□□ -0.02
GIN1-204ENST00000511400 AKT1S1Q96B36 256 aa14.9□□□□□ -0.02
GIN1-204ENST00000511400 REM2Q8IYK8 340 aaPredicted RBP14.83□□□□□ -0.04
GIN1-204ENST00000511400 MKRN4PQ13434 485 aaPredicted RBP14.77□□□□□ -0.05
GIN1-204ENST00000511400 CSRNP3Q8WYN3 585 aa14.75□□□□□ -0.05
GIN1-204ENST00000511400 FBLN2P98095 1184 aa14.68□□□□□ -0.06
GIN1-204ENST00000511400 PITPNM1O00562 1244 aa14.67□□□□□ -0.06
GIN1-204ENST00000511400 PIP4P2Q8N4L2 257 aa14.63□□□□□ -0.07
GIN1-204ENST00000511400 SPDYE2BA6NHP3 402 aa14.61□□□□□ -0.07
GIN1-204ENST00000511400 SPDYE6P0CI01 402 aa14.61□□□□□ -0.07
GIN1-204ENST00000511400 SPDYE2Q495Y8 402 aa14.61□□□□□ -0.07
GIN1-204ENST00000511400 FXR2P51116 673 aaKnown RBP eCLIP14.54□□□□□ -0.08
GIN1-204ENST00000511400 EHMT2Q96KQ7 1210 aa14.51□□□□□ -0.09
GIN1-204ENST00000511400 SSUH2Q9Y2M2 353 aa14.48□□□□□ -0.09
GIN1-204ENST00000511400 ZNF692Q9BU19 519 aaPredicted RBP14.47□□□□□ -0.09
GIN1-204ENST00000511400 CLEC11AQ9Y240 323 aa14.37□□□□□ -0.11
GIN1-204ENST00000511400 SP7Q8TDD2 431 aaPredicted RBP14.36□□□□□ -0.11
GIN1-204ENST00000511400 SPDYE1Q8NFV5 336 aaPredicted RBP14.35□□□□□ -0.11
GIN1-204ENST00000511400 HAX1O00165 279 aa14.32□□□□□ -0.12
GIN1-204ENST00000511400 EVX2Q03828 476 aa14.3□□□□□ -0.12
GIN1-204ENST00000511400 PABPN1Q86U42 306 aaKnown RBP eCLIP14.29□□□□□ -0.12
GIN1-204ENST00000511400 PRKAR2AP13861 404 aaKnown RBP14.27□□□□□ -0.13
GIN1-204ENST00000511400 CHADLQ6NUI6 762 aa14.18□□□□□ -0.14
GIN1-204ENST00000511400 PRR29P0C7W0 189 aa14.11□□□□□ -0.15
GIN1-204ENST00000511400 C19orf67A6NJJ6 358 aa14.07□□□□□ -0.16
GIN1-204ENST00000511400 SPDYE4A6NLX3 237 aa13.97□□□□□ -0.17
GIN1-204ENST00000511400 FARP1Q9Y4F1 1045 aaPredicted RBP13.91□□□□□ -0.18
GIN1-204ENST00000511400 GABBR2O75899 941 aa13.88□□□□□ -0.19
GIN1-204ENST00000511400 CREBZFQ9NS37 354 aa13.85□□□□□ -0.19
GIN1-204ENST00000511400 CD44P16070 742 aaKnown RBP13.8□□□□□ -0.2
GIN1-204ENST00000511400 STAG3Q9UJ98 1225 aa13.79□□□□□ -0.2
GIN1-204ENST00000511400 PROM2Q8N271 834 aa13.68□□□□□ -0.22
GIN1-204ENST00000511400 POTEIP0CG38 1075 aa13.67□□□□□ -0.22
GIN1-204ENST00000511400 MNX1P50219 401 aaPredicted RBP13.65□□□□□ -0.22
GIN1-204ENST00000511400 ZRANB1Q9UGI0 708 aa13.62□□□□□ -0.23
GIN1-204ENST00000511400 ZNF579Q8NAF0 562 aaKnown RBP13.59□□□□□ -0.23
GIN1-204ENST00000511400 GALR2O43603 387 aaPredicted RBP13.49□□□□□ -0.25
GIN1-204ENST00000511400 CLCN6P51797 869 aa13.48□□□□□ -0.25
GIN1-204ENST00000511400 LHX8Q68G74 356 aa13.48□□□□□ -0.25
GIN1-204ENST00000511400 PHF12Q96QT6 1004 aa13.48□□□□□ -0.25
GIN1-204ENST00000511400 NPM1P06748 294 aaKnown RBP eCLIP13.46□□□□□ -0.25
GIN1-204ENST00000511400 DCBLD2Q96PD2 775 aa13.41□□□□□ -0.26
GIN1-204ENST00000511400 PAK3O75914 559 aaPredicted RBP13.39□□□□□ -0.27
GIN1-204ENST00000511400 MIER1Q8N108 512 aa13.32□□□□□ -0.28
GIN1-204ENST00000511400 TSPYL2Q9H2G4 693 aaPredicted RBP13.32□□□□□ -0.28
GIN1-204ENST00000511400 FKBP8Q14318 412 aa13.31□□□□□ -0.28
GIN1-204ENST00000511400 MS4A3Q96HJ5 214 aa13.29□□□□□ -0.28
GIN1-204ENST00000511400 PELP1Q8IZL8 1130 aaKnown RBP13.28□□□□□ -0.28
GIN1-204ENST00000511400 CCDC61Q9Y6R9 512 aa13.27□□□□□ -0.29
GIN1-204ENST00000511400 RASEFQ8IZ41 740 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms