RNA–Protein interactions for RNA: ENST00000511391.1

ARRDC3-206, Transcript of arrestin domain containing 3, humanhuman

TSL 2

Gene ARRDC3, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3-206ENST00000511391 AEBP2Q6ZN18 517 aaPredicted RBP32.58■■■□□ 2.81
ARRDC3-206ENST00000511391 CHIC1Q5VXU3 224 aa30.34■■■□□ 2.45
ARRDC3-206ENST00000511391 SENP3Q9H4L4 574 aaPredicted RBP27.75■■■□□ 2.03
ARRDC3-206ENST00000511391 PHF23Q9BUL5 403 aaPredicted RBP27.33■■□□□ 1.97
ARRDC3-206ENST00000511391 FOXD1Q16676 465 aa26■■□□□ 1.75
ARRDC3-206ENST00000511391 POTEDQ86YR6 584 aa24.86■■□□□ 1.57
ARRDC3-206ENST00000511391 MSH5O43196 834 aa24.45■■□□□ 1.5
ARRDC3-206ENST00000511391 PIAS4Q8N2W9 510 aaPredicted RBP24.11■■□□□ 1.45
ARRDC3-206ENST00000511391 PLPPR3Q6T4P5 718 aa23.94■■□□□ 1.42
ARRDC3-206ENST00000511391 PPP6R1Q9UPN7 881 aa23.93■■□□□ 1.42
ARRDC3-206ENST00000511391 ADRA2BP18089 450 aa23.78■■□□□ 1.4
ARRDC3-206ENST00000511391 MAPK8IP2Q13387 824 aaPredicted RBP22.02■■□□□ 1.12
ARRDC3-206ENST00000511391 DMRT2Q9Y5R5 561 aa21.96■■□□□ 1.11
ARRDC3-206ENST00000511391 SCAF1Q9H7N4 1312 aaKnown RBP21.61■■□□□ 1.05
ARRDC3-206ENST00000511391 CACNB1Q02641 598 aaPredicted RBP21.29■■□□□ 1
ARRDC3-206ENST00000511391 DCAF8L1A6NGE4 600 aa21■□□□□ 0.95
ARRDC3-206ENST00000511391 HOXD11P31277 338 aaPredicted RBP20.95■□□□□ 0.94
ARRDC3-206ENST00000511391 PPP4R3CPQ6ZMV5 832 aa20.94■□□□□ 0.94
ARRDC3-206ENST00000511391 RNF39Q9H2S5 420 aa20.88■□□□□ 0.93
ARRDC3-206ENST00000511391 CNKSR2Q8WXI2 1034 aa20.64■□□□□ 0.89
ARRDC3-206ENST00000511391 RNF216Q9NWF9 866 aaPredicted RBP20.61■□□□□ 0.89
ARRDC3-206ENST00000511391 C1QBPQ07021 282 aaKnown RBP20.48■□□□□ 0.87
ARRDC3-206ENST00000511391 DNAJC5BQ9UF47 199 aa20.3■□□□□ 0.84
ARRDC3-206ENST00000511391 NCBP3Q53F19 620 aaKnown RBP19.88■□□□□ 0.77
ARRDC3-206ENST00000511391 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.87■□□□□ 0.77
ARRDC3-206ENST00000511391 NPM3O75607 178 aaKnown RBP19.72■□□□□ 0.75
ARRDC3-206ENST00000511391 U3KPZ7 1027 aaPredicted RBP19.5■□□□□ 0.71
ARRDC3-206ENST00000511391 SPINK5Q9NQ38 1064 aaPredicted RBP19.38■□□□□ 0.69
ARRDC3-206ENST00000511391 DSG3P32926 999 aa19.37■□□□□ 0.69
ARRDC3-206ENST00000511391 POTEHQ6S545 545 aa19.34■□□□□ 0.69
ARRDC3-206ENST00000511391 CAPN15O75808 1086 aa19.28■□□□□ 0.68
ARRDC3-206ENST00000511391 SLC4A2P04920 1241 aa19.01■□□□□ 0.63
ARRDC3-206ENST00000511391 KCNA4P22459 653 aa18.88■□□□□ 0.61
ARRDC3-206ENST00000511391 ABCB7O75027 752 aa18.84■□□□□ 0.61
ARRDC3-206ENST00000511391 TRHP20396 242 aaPredicted RBP18.84■□□□□ 0.61
ARRDC3-206ENST00000511391 ZNF219Q9P2Y4 722 aaPredicted RBP18.78■□□□□ 0.6
ARRDC3-206ENST00000511391 APLP2Q06481 763 aa18.72■□□□□ 0.59
ARRDC3-206ENST00000511391 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.62■□□□□ 0.57
ARRDC3-206ENST00000511391 HNRNPUL2Q1KMD3 747 aaKnown RBP18.62■□□□□ 0.57
ARRDC3-206ENST00000511391 SAMD1Q6SPF0 538 aaPredicted RBP18.52■□□□□ 0.56
ARRDC3-206ENST00000511391 RBM42Q9BTD8 480 aaKnown RBP18.4■□□□□ 0.54
ARRDC3-206ENST00000511391 CHRDL2Q6WN34 429 aa18.27■□□□□ 0.52
ARRDC3-206ENST00000511391 POLA2Q14181 598 aa18.24■□□□□ 0.51
ARRDC3-206ENST00000511391 MYCNP04198 464 aaPredicted RBP18.2■□□□□ 0.5
ARRDC3-206ENST00000511391 ATF5Q9Y2D1 282 aaPredicted RBP17.92■□□□□ 0.46
ARRDC3-206ENST00000511391 AKT1S1Q96B36 256 aa17.9■□□□□ 0.46
ARRDC3-206ENST00000511391 SP7Q8TDD2 431 aaPredicted RBP17.87■□□□□ 0.45
ARRDC3-206ENST00000511391 ZBTB12Q9Y330 459 aaPredicted RBP17.77■□□□□ 0.44
ARRDC3-206ENST00000511391 REM2Q8IYK8 340 aaPredicted RBP17.76■□□□□ 0.43
ARRDC3-206ENST00000511391 PIP4P2Q8N4L2 257 aa17.75■□□□□ 0.43
ARRDC3-206ENST00000511391 OSCARQ8IYS5 282 aa17.73■□□□□ 0.43
ARRDC3-206ENST00000511391 FOXD4L1Q9NU39 408 aa17.73■□□□□ 0.43
ARRDC3-206ENST00000511391 SLC4A1APQ9BWU0 796 aaKnown RBP17.65■□□□□ 0.42
ARRDC3-206ENST00000511391 PITPNM1O00562 1244 aa17.61■□□□□ 0.41
ARRDC3-206ENST00000511391 FXR2P51116 673 aaKnown RBP eCLIP17.55■□□□□ 0.4
ARRDC3-206ENST00000511391 HAX1O00165 279 aa17.49■□□□□ 0.39
ARRDC3-206ENST00000511391 ZBTB22O15209 634 aa17.42■□□□□ 0.38
ARRDC3-206ENST00000511391 EVX2Q03828 476 aa17.37■□□□□ 0.37
ARRDC3-206ENST00000511391 SPDYE2BA6NHP3 402 aa17.22■□□□□ 0.35
ARRDC3-206ENST00000511391 SPDYE6P0CI01 402 aa17.22■□□□□ 0.35
ARRDC3-206ENST00000511391 SPDYE2Q495Y8 402 aa17.22■□□□□ 0.35
ARRDC3-206ENST00000511391 ATXN8OSP0DMR3 200 aa17.21■□□□□ 0.35
ARRDC3-206ENST00000511391 PRKAR2AP13861 404 aaKnown RBP17.1■□□□□ 0.33
ARRDC3-206ENST00000511391 FBLN2P98095 1184 aa17.1■□□□□ 0.33
ARRDC3-206ENST00000511391 MKRN4PQ13434 485 aaPredicted RBP17.07■□□□□ 0.32
ARRDC3-206ENST00000511391 SPDYE1Q8NFV5 336 aaPredicted RBP17.02■□□□□ 0.32
ARRDC3-206ENST00000511391 CLEC11AQ9Y240 323 aa17.02■□□□□ 0.32
ARRDC3-206ENST00000511391 C19orf67A6NJJ6 358 aa17.01■□□□□ 0.31
ARRDC3-206ENST00000511391 SSUH2Q9Y2M2 353 aa17■□□□□ 0.31
ARRDC3-206ENST00000511391 ZNF692Q9BU19 519 aaPredicted RBP16.9■□□□□ 0.3
ARRDC3-206ENST00000511391 GABBR2O75899 941 aa16.88■□□□□ 0.29
ARRDC3-206ENST00000511391 CHADLQ6NUI6 762 aa16.83■□□□□ 0.28
ARRDC3-206ENST00000511391 LHX8Q68G74 356 aa16.74■□□□□ 0.27
ARRDC3-206ENST00000511391 PABPN1Q86U42 306 aaKnown RBP eCLIP16.67■□□□□ 0.26
ARRDC3-206ENST00000511391 PRR29P0C7W0 189 aa16.65■□□□□ 0.26
ARRDC3-206ENST00000511391 POTEIP0CG38 1075 aa16.59■□□□□ 0.25
ARRDC3-206ENST00000511391 CD44P16070 742 aaKnown RBP16.53■□□□□ 0.24
ARRDC3-206ENST00000511391 FARP1Q9Y4F1 1045 aaPredicted RBP16.5■□□□□ 0.23
ARRDC3-206ENST00000511391 CLCN6P51797 869 aa16.32■□□□□ 0.2
ARRDC3-206ENST00000511391 ZNF579Q8NAF0 562 aaKnown RBP16.28■□□□□ 0.2
ARRDC3-206ENST00000511391 DCBLD2Q96PD2 775 aa16.23■□□□□ 0.19
ARRDC3-206ENST00000511391 CREBZFQ9NS37 354 aa16.21■□□□□ 0.19
ARRDC3-206ENST00000511391 ZRANB1Q9UGI0 708 aa16.19■□□□□ 0.18
ARRDC3-206ENST00000511391 GALR2O43603 387 aaPredicted RBP16.14■□□□□ 0.17
ARRDC3-206ENST00000511391 PLSCR2Q9NRY7 297 aa16.07■□□□□ 0.16
ARRDC3-206ENST00000511391 CSRNP3Q8WYN3 585 aa16.06■□□□□ 0.16
ARRDC3-206ENST00000511391 OTUD5Q96G74 571 aa16.05■□□□□ 0.16
ARRDC3-206ENST00000511391 POTEB2H3BUK9 544 aa16.03■□□□□ 0.16
ARRDC3-206ENST00000511391 STAG3Q9UJ98 1225 aa16.02■□□□□ 0.16
ARRDC3-206ENST00000511391 PHF12Q96QT6 1004 aa15.98■□□□□ 0.15
ARRDC3-206ENST00000511391 MNX1P50219 401 aaPredicted RBP15.91■□□□□ 0.14
ARRDC3-206ENST00000511391 PELP1Q8IZL8 1130 aaKnown RBP15.9■□□□□ 0.14
ARRDC3-206ENST00000511391 SPDYE4A6NLX3 237 aa15.89■□□□□ 0.13
ARRDC3-206ENST00000511391 PAK3O75914 559 aaPredicted RBP15.86■□□□□ 0.13
ARRDC3-206ENST00000511391 POTEMA6NI47 508 aa15.8■□□□□ 0.12
ARRDC3-206ENST00000511391 NPM1P06748 294 aaKnown RBP eCLIP15.77■□□□□ 0.12
ARRDC3-206ENST00000511391 ASTLQ6HA08 431 aaPredicted RBP15.75■□□□□ 0.11
ARRDC3-206ENST00000511391 MS4A3Q96HJ5 214 aa15.75■□□□□ 0.11
ARRDC3-206ENST00000511391 POTEJP0CG39 1038 aa15.74■□□□□ 0.11
ARRDC3-206ENST00000511391 POTEGQ6S5H5 508 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms