RNA–Protein interactions for RNA: ENST00000511365.1

SNX2-210, Transcript of sorting nexin 2, humanhuman

TSL 5

Gene SNX2, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-210ENST00000511365 AEBP2Q6ZN18 517 aaPredicted RBP24.63■■□□□ 1.53
SNX2-210ENST00000511365 CHIC1Q5VXU3 224 aa23.15■■□□□ 1.3
SNX2-210ENST00000511365 SENP3Q9H4L4 574 aaPredicted RBP21.22■□□□□ 0.99
SNX2-210ENST00000511365 PHF23Q9BUL5 403 aaPredicted RBP20.8■□□□□ 0.92
SNX2-210ENST00000511365 FOXD1Q16676 465 aa19.76■□□□□ 0.75
SNX2-210ENST00000511365 POTEDQ86YR6 584 aa19.21■□□□□ 0.67
SNX2-210ENST00000511365 MSH5O43196 834 aa18.8■□□□□ 0.6
SNX2-210ENST00000511365 PLPPR3Q6T4P5 718 aa18.59■□□□□ 0.57
SNX2-210ENST00000511365 PIAS4Q8N2W9 510 aaPredicted RBP18.38■□□□□ 0.53
SNX2-210ENST00000511365 PPP6R1Q9UPN7 881 aa18■□□□□ 0.47
SNX2-210ENST00000511365 ADRA2BP18089 450 aa17.94■□□□□ 0.46
SNX2-210ENST00000511365 DMRT2Q9Y5R5 561 aa16.71■□□□□ 0.27
SNX2-210ENST00000511365 MAPK8IP2Q13387 824 aaPredicted RBP16.61■□□□□ 0.25
SNX2-210ENST00000511365 SCAF1Q9H7N4 1312 aaKnown RBP16.54■□□□□ 0.24
SNX2-210ENST00000511365 CACNB1Q02641 598 aaPredicted RBP16.44■□□□□ 0.22
SNX2-210ENST00000511365 PPP4R3CPQ6ZMV5 832 aa16.33■□□□□ 0.2
SNX2-210ENST00000511365 DCAF8L1A6NGE4 600 aa16.06■□□□□ 0.16
SNX2-210ENST00000511365 NCBP3Q53F19 620 aaKnown RBP16■□□□□ 0.15
SNX2-210ENST00000511365 KCNA4P22459 653 aa15.94■□□□□ 0.14
SNX2-210ENST00000511365 RNF39Q9H2S5 420 aa15.94■□□□□ 0.14
SNX2-210ENST00000511365 CNKSR2Q8WXI2 1034 aa15.92■□□□□ 0.14
SNX2-210ENST00000511365 HOXD11P31277 338 aaPredicted RBP15.87■□□□□ 0.13
SNX2-210ENST00000511365 C1QBPQ07021 282 aaKnown RBP15.72■□□□□ 0.11
SNX2-210ENST00000511365 NPM3O75607 178 aaKnown RBP15.64■□□□□ 0.09
SNX2-210ENST00000511365 RNF216Q9NWF9 866 aaPredicted RBP15.63■□□□□ 0.09
SNX2-210ENST00000511365 DNAJC5BQ9UF47 199 aa15.49■□□□□ 0.07
SNX2-210ENST00000511365 EHMT2Q96KQ7 1210 aa15.23■□□□□ 0.03
SNX2-210ENST00000511365 SLC4A1APQ9BWU0 796 aaKnown RBP15.21■□□□□ 0.03
SNX2-210ENST00000511365 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.14■□□□□ 0.01
SNX2-210ENST00000511365 POTEHQ6S545 545 aa14.97□□□□□ -0.01
SNX2-210ENST00000511365 CSRNP3Q8WYN3 585 aa14.86□□□□□ -0.03
SNX2-210ENST00000511365 SLC4A2P04920 1241 aa14.73□□□□□ -0.05
SNX2-210ENST00000511365 DSG3P32926 999 aa14.73□□□□□ -0.05
SNX2-210ENST00000511365 U3KPZ7 1027 aaPredicted RBP14.73□□□□□ -0.05
SNX2-210ENST00000511365 CAPN15O75808 1086 aa14.72□□□□□ -0.05
SNX2-210ENST00000511365 FOXD4L1Q9NU39 408 aa14.7□□□□□ -0.06
SNX2-210ENST00000511365 ZBTB22O15209 634 aa14.69□□□□□ -0.06
SNX2-210ENST00000511365 SPINK5Q9NQ38 1064 aaPredicted RBP14.65□□□□□ -0.06
SNX2-210ENST00000511365 MYCNP04198 464 aaPredicted RBP14.54□□□□□ -0.08
SNX2-210ENST00000511365 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.48□□□□□ -0.09
SNX2-210ENST00000511365 HNRNPUL2Q1KMD3 747 aaKnown RBP14.48□□□□□ -0.09
SNX2-210ENST00000511365 APLP2Q06481 763 aa14.4□□□□□ -0.1
SNX2-210ENST00000511365 SAMD1Q6SPF0 538 aaPredicted RBP14.39□□□□□ -0.11
SNX2-210ENST00000511365 ZNF219Q9P2Y4 722 aaPredicted RBP14.34□□□□□ -0.11
SNX2-210ENST00000511365 TRHP20396 242 aaPredicted RBP14.33□□□□□ -0.12
SNX2-210ENST00000511365 ABCB7O75027 752 aa14.29□□□□□ -0.12
SNX2-210ENST00000511365 ATXN8OSP0DMR3 200 aa14.23□□□□□ -0.13
SNX2-210ENST00000511365 RBM42Q9BTD8 480 aaKnown RBP14.16□□□□□ -0.14
SNX2-210ENST00000511365 CHRDL2Q6WN34 429 aa14.01□□□□□ -0.17
SNX2-210ENST00000511365 ATF5Q9Y2D1 282 aaPredicted RBP14.01□□□□□ -0.17
SNX2-210ENST00000511365 POLA2Q14181 598 aa13.81□□□□□ -0.2
SNX2-210ENST00000511365 SP7Q8TDD2 431 aaPredicted RBP13.79□□□□□ -0.2
SNX2-210ENST00000511365 ZBTB12Q9Y330 459 aaPredicted RBP13.69□□□□□ -0.22
SNX2-210ENST00000511365 AKT1S1Q96B36 256 aa13.68□□□□□ -0.22
SNX2-210ENST00000511365 FBLN2P98095 1184 aa13.61□□□□□ -0.23
SNX2-210ENST00000511365 PIP4P2Q8N4L2 257 aa13.54□□□□□ -0.24
SNX2-210ENST00000511365 REM2Q8IYK8 340 aaPredicted RBP13.51□□□□□ -0.25
SNX2-210ENST00000511365 HAX1O00165 279 aa13.46□□□□□ -0.25
SNX2-210ENST00000511365 MKRN4PQ13434 485 aaPredicted RBP13.41□□□□□ -0.26
SNX2-210ENST00000511365 FKBP8Q14318 412 aa13.41□□□□□ -0.26
SNX2-210ENST00000511365 OSCARQ8IYS5 282 aa13.4□□□□□ -0.26
SNX2-210ENST00000511365 PITPNM1O00562 1244 aa13.38□□□□□ -0.27
SNX2-210ENST00000511365 FXR2P51116 673 aaKnown RBP eCLIP13.37□□□□□ -0.27
SNX2-210ENST00000511365 SPDYE2BA6NHP3 402 aa13.25□□□□□ -0.29
SNX2-210ENST00000511365 SPDYE6P0CI01 402 aa13.25□□□□□ -0.29
SNX2-210ENST00000511365 SPDYE2Q495Y8 402 aa13.25□□□□□ -0.29
SNX2-210ENST00000511365 SPDYE4A6NLX3 237 aa13.2□□□□□ -0.3
SNX2-210ENST00000511365 ZNF692Q9BU19 519 aaPredicted RBP13.18□□□□□ -0.3
SNX2-210ENST00000511365 EVX2Q03828 476 aa13.15□□□□□ -0.3
SNX2-210ENST00000511365 SSUH2Q9Y2M2 353 aa13.09□□□□□ -0.31
SNX2-210ENST00000511365 PRKAR2AP13861 404 aaKnown RBP13.04□□□□□ -0.32
SNX2-210ENST00000511365 PABPN1Q86U42 306 aaKnown RBP eCLIP12.99□□□□□ -0.33
SNX2-210ENST00000511365 SPDYE1Q8NFV5 336 aaPredicted RBP12.99□□□□□ -0.33
SNX2-210ENST00000511365 C19orf67A6NJJ6 358 aa12.97□□□□□ -0.33
SNX2-210ENST00000511365 CLEC11AQ9Y240 323 aa12.96□□□□□ -0.33
SNX2-210ENST00000511365 PROM2Q8N271 834 aa12.93□□□□□ -0.34
SNX2-210ENST00000511365 LHX8Q68G74 356 aa12.91□□□□□ -0.34
SNX2-210ENST00000511365 GABBR2O75899 941 aa12.9□□□□□ -0.34
SNX2-210ENST00000511365 STAG3Q9UJ98 1225 aa12.85□□□□□ -0.35
SNX2-210ENST00000511365 RTN4Q9NQC3 1192 aaKnown RBP12.83□□□□□ -0.36
SNX2-210ENST00000511365 FBXO3Q9UK99 471 aa12.81□□□□□ -0.36
SNX2-210ENST00000511365 AMER1Q5JTC6 1135 aaPredicted RBP12.77□□□□□ -0.37
SNX2-210ENST00000511365 CHADLQ6NUI6 762 aa12.73□□□□□ -0.37
SNX2-210ENST00000511365 PRR29P0C7W0 189 aa12.69□□□□□ -0.38
SNX2-210ENST00000511365 VASPP50552 380 aaPredicted RBP12.63□□□□□ -0.39
SNX2-210ENST00000511365 CLCN6P51797 869 aa12.61□□□□□ -0.39
SNX2-210ENST00000511365 PLEKHG5O94827 1062 aa12.6□□□□□ -0.39
SNX2-210ENST00000511365 CD44P16070 742 aaKnown RBP12.6□□□□□ -0.39
SNX2-210ENST00000511365 POTEIP0CG38 1075 aa12.58□□□□□ -0.4
SNX2-210ENST00000511365 PLCD3Q8N3E9 789 aa12.55□□□□□ -0.4
SNX2-210ENST00000511365 PLSCR2Q9NRY7 297 aa12.55□□□□□ -0.4
SNX2-210ENST00000511365 MIER1Q8N108 512 aa12.53□□□□□ -0.4
SNX2-210ENST00000511365 FARP1Q9Y4F1 1045 aaPredicted RBP12.52□□□□□ -0.41
SNX2-210ENST00000511365 IFNLR1Q8IU57 520 aaPredicted RBP12.51□□□□□ -0.41
SNX2-210ENST00000511365 DCBLD2Q96PD2 775 aa12.49□□□□□ -0.41
SNX2-210ENST00000511365 ZBTB47Q9UFB7 747 aaPredicted RBP12.47□□□□□ -0.41
SNX2-210ENST00000511365 CREBZFQ9NS37 354 aa12.45□□□□□ -0.42
SNX2-210ENST00000511365 KLHL34Q8N239 644 aa12.4□□□□□ -0.42
SNX2-210ENST00000511365 ZNF579Q8NAF0 562 aaKnown RBP12.39□□□□□ -0.43
SNX2-210ENST00000511365 NPM1P06748 294 aaKnown RBP eCLIP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms