RNA–Protein interactions for RNA: ENST00000511342.1

TUSC3-211, Transcript of tumor suppressor candidate 3, humanhuman

TSL 2

Gene TUSC3, Length 555 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-211ENST00000511342 AEBP2Q6ZN18 517 aaPredicted RBP32.83■■■□□ 2.85
TUSC3-211ENST00000511342 CHIC1Q5VXU3 224 aa31.56■■■□□ 2.64
TUSC3-211ENST00000511342 SENP3Q9H4L4 574 aaPredicted RBP28.08■■■□□ 2.09
TUSC3-211ENST00000511342 PHF23Q9BUL5 403 aaPredicted RBP27.68■■■□□ 2.02
TUSC3-211ENST00000511342 FOXD1Q16676 465 aa26.04■■□□□ 1.76
TUSC3-211ENST00000511342 PLPPR3Q6T4P5 718 aa25.39■■□□□ 1.66
TUSC3-211ENST00000511342 PPP6R1Q9UPN7 881 aa24.53■■□□□ 1.52
TUSC3-211ENST00000511342 ADRA2BP18089 450 aa24.46■■□□□ 1.51
TUSC3-211ENST00000511342 PIAS4Q8N2W9 510 aaPredicted RBP24.41■■□□□ 1.5
TUSC3-211ENST00000511342 MSH5O43196 834 aa24.36■■□□□ 1.49
TUSC3-211ENST00000511342 POTEDQ86YR6 584 aa23.14■■□□□ 1.29
TUSC3-211ENST00000511342 SCAF1Q9H7N4 1312 aaKnown RBP22.56■■□□□ 1.2
TUSC3-211ENST00000511342 MAPK8IP2Q13387 824 aaPredicted RBP22.35■■□□□ 1.17
TUSC3-211ENST00000511342 DMRT2Q9Y5R5 561 aa22.3■■□□□ 1.16
TUSC3-211ENST00000511342 PPP4R3CPQ6ZMV5 832 aa22.23■■□□□ 1.15
TUSC3-211ENST00000511342 CNKSR2Q8WXI2 1034 aa21.81■■□□□ 1.08
TUSC3-211ENST00000511342 HOXD11P31277 338 aaPredicted RBP21.62■■□□□ 1.05
TUSC3-211ENST00000511342 NCBP3Q53F19 620 aaKnown RBP21.56■■□□□ 1.04
TUSC3-211ENST00000511342 RNF216Q9NWF9 866 aaPredicted RBP21.54■■□□□ 1.04
TUSC3-211ENST00000511342 DCAF8L1A6NGE4 600 aa21.22■□□□□ 0.99
TUSC3-211ENST00000511342 NPM3O75607 178 aaKnown RBP21.15■□□□□ 0.98
TUSC3-211ENST00000511342 KCNA4P22459 653 aa20.98■□□□□ 0.95
TUSC3-211ENST00000511342 DNAJC5BQ9UF47 199 aa20.97■□□□□ 0.95
TUSC3-211ENST00000511342 RNF39Q9H2S5 420 aa20.78■□□□□ 0.92
TUSC3-211ENST00000511342 CACNB1Q02641 598 aaPredicted RBP20.61■□□□□ 0.89
TUSC3-211ENST00000511342 C1QBPQ07021 282 aaKnown RBP20.55■□□□□ 0.88
TUSC3-211ENST00000511342 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.53■□□□□ 0.88
TUSC3-211ENST00000511342 U3KPZ7 1027 aaPredicted RBP20.13■□□□□ 0.81
TUSC3-211ENST00000511342 SLC4A2P04920 1241 aa20.12■□□□□ 0.81
TUSC3-211ENST00000511342 SLC4A1APQ9BWU0 796 aaKnown RBP19.91■□□□□ 0.78
TUSC3-211ENST00000511342 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.8■□□□□ 0.76
TUSC3-211ENST00000511342 HNRNPUL2Q1KMD3 747 aaKnown RBP19.8■□□□□ 0.76
TUSC3-211ENST00000511342 APLP2Q06481 763 aa19.75■□□□□ 0.75
TUSC3-211ENST00000511342 SPINK5Q9NQ38 1064 aaPredicted RBP19.69■□□□□ 0.74
TUSC3-211ENST00000511342 SAMD1Q6SPF0 538 aaPredicted RBP19.67■□□□□ 0.74
TUSC3-211ENST00000511342 CAPN15O75808 1086 aa19.66■□□□□ 0.74
TUSC3-211ENST00000511342 MYCNP04198 464 aaPredicted RBP19.62■□□□□ 0.73
TUSC3-211ENST00000511342 FOXD4L1Q9NU39 408 aa19.57■□□□□ 0.72
TUSC3-211ENST00000511342 DSG3P32926 999 aa19.53■□□□□ 0.72
TUSC3-211ENST00000511342 ZNF219Q9P2Y4 722 aaPredicted RBP19.51■□□□□ 0.71
TUSC3-211ENST00000511342 TRHP20396 242 aaPredicted RBP19.4■□□□□ 0.7
TUSC3-211ENST00000511342 ZBTB22O15209 634 aa19.28■□□□□ 0.68
TUSC3-211ENST00000511342 ABCB7O75027 752 aa19.18■□□□□ 0.66
TUSC3-211ENST00000511342 ATXN8OSP0DMR3 200 aa19.03■□□□□ 0.64
TUSC3-211ENST00000511342 ATF5Q9Y2D1 282 aaPredicted RBP19.01■□□□□ 0.63
TUSC3-211ENST00000511342 POLA2Q14181 598 aa18.99■□□□□ 0.63
TUSC3-211ENST00000511342 ZBTB12Q9Y330 459 aaPredicted RBP18.78■□□□□ 0.6
TUSC3-211ENST00000511342 RBM42Q9BTD8 480 aaKnown RBP18.72■□□□□ 0.59
TUSC3-211ENST00000511342 CSRNP3Q8WYN3 585 aa18.7■□□□□ 0.58
TUSC3-211ENST00000511342 EHMT2Q96KQ7 1210 aa18.53■□□□□ 0.56
TUSC3-211ENST00000511342 FBLN2P98095 1184 aa18.38■□□□□ 0.53
TUSC3-211ENST00000511342 OSCARQ8IYS5 282 aa18.35■□□□□ 0.53
TUSC3-211ENST00000511342 AKT1S1Q96B36 256 aa18.33■□□□□ 0.52
TUSC3-211ENST00000511342 POTEHQ6S545 545 aa18.21■□□□□ 0.51
TUSC3-211ENST00000511342 MKRN4PQ13434 485 aaPredicted RBP18.2■□□□□ 0.5
TUSC3-211ENST00000511342 SPDYE2BA6NHP3 402 aa18.18■□□□□ 0.5
TUSC3-211ENST00000511342 SPDYE6P0CI01 402 aa18.18■□□□□ 0.5
TUSC3-211ENST00000511342 SPDYE2Q495Y8 402 aa18.18■□□□□ 0.5
TUSC3-211ENST00000511342 CHRDL2Q6WN34 429 aa18.1■□□□□ 0.49
TUSC3-211ENST00000511342 REM2Q8IYK8 340 aaPredicted RBP18.09■□□□□ 0.49
TUSC3-211ENST00000511342 SSUH2Q9Y2M2 353 aa17.96■□□□□ 0.47
TUSC3-211ENST00000511342 ZNF692Q9BU19 519 aaPredicted RBP17.93■□□□□ 0.46
TUSC3-211ENST00000511342 PITPNM1O00562 1244 aa17.87■□□□□ 0.45
TUSC3-211ENST00000511342 SPDYE1Q8NFV5 336 aaPredicted RBP17.77■□□□□ 0.44
TUSC3-211ENST00000511342 FXR2P51116 673 aaKnown RBP eCLIP17.72■□□□□ 0.43
TUSC3-211ENST00000511342 PIP4P2Q8N4L2 257 aa17.71■□□□□ 0.43
TUSC3-211ENST00000511342 PABPN1Q86U42 306 aaKnown RBP eCLIP17.66■□□□□ 0.42
TUSC3-211ENST00000511342 CLEC11AQ9Y240 323 aa17.6■□□□□ 0.41
TUSC3-211ENST00000511342 SPDYE4A6NLX3 237 aa17.52■□□□□ 0.4
TUSC3-211ENST00000511342 PRR29P0C7W0 189 aa17.42■□□□□ 0.38
TUSC3-211ENST00000511342 PRKAR2AP13861 404 aaKnown RBP17.41■□□□□ 0.38
TUSC3-211ENST00000511342 STAG3Q9UJ98 1225 aa17.36■□□□□ 0.37
TUSC3-211ENST00000511342 HAX1O00165 279 aa17.29■□□□□ 0.36
TUSC3-211ENST00000511342 PROM2Q8N271 834 aa17.24■□□□□ 0.35
TUSC3-211ENST00000511342 SP7Q8TDD2 431 aaPredicted RBP17.24■□□□□ 0.35
TUSC3-211ENST00000511342 CHADLQ6NUI6 762 aa17.2■□□□□ 0.34
TUSC3-211ENST00000511342 C19orf67A6NJJ6 358 aa17.13■□□□□ 0.33
TUSC3-211ENST00000511342 FARP1Q9Y4F1 1045 aaPredicted RBP17.09■□□□□ 0.33
TUSC3-211ENST00000511342 CREBZFQ9NS37 354 aa17.05■□□□□ 0.32
TUSC3-211ENST00000511342 EVX2Q03828 476 aa17.04■□□□□ 0.32
TUSC3-211ENST00000511342 FKBP8Q14318 412 aa16.91■□□□□ 0.3
TUSC3-211ENST00000511342 CD44P16070 742 aaKnown RBP16.88■□□□□ 0.29
TUSC3-211ENST00000511342 NPM1P06748 294 aaKnown RBP eCLIP16.82■□□□□ 0.28
TUSC3-211ENST00000511342 MNX1P50219 401 aaPredicted RBP16.82■□□□□ 0.28
TUSC3-211ENST00000511342 CLCN6P51797 869 aa16.81■□□□□ 0.28
TUSC3-211ENST00000511342 GABBR2O75899 941 aa16.75■□□□□ 0.27
TUSC3-211ENST00000511342 PLEKHG5O94827 1062 aa16.72■□□□□ 0.27
TUSC3-211ENST00000511342 ZNF579Q8NAF0 562 aaKnown RBP16.71■□□□□ 0.27
TUSC3-211ENST00000511342 PAK3O75914 559 aaPredicted RBP16.68■□□□□ 0.26
TUSC3-211ENST00000511342 ZRANB1Q9UGI0 708 aa16.68■□□□□ 0.26
TUSC3-211ENST00000511342 MIER1Q8N108 512 aa16.66■□□□□ 0.26
TUSC3-211ENST00000511342 FBXO3Q9UK99 471 aa16.62■□□□□ 0.25
TUSC3-211ENST00000511342 PLCD3Q8N3E9 789 aa16.57■□□□□ 0.24
TUSC3-211ENST00000511342 ZBTB47Q9UFB7 747 aaPredicted RBP16.56■□□□□ 0.24
TUSC3-211ENST00000511342 PHF12Q96QT6 1004 aa16.44■□□□□ 0.22
TUSC3-211ENST00000511342 TSPYL2Q9H2G4 693 aaPredicted RBP16.4■□□□□ 0.22
TUSC3-211ENST00000511342 CCDC61Q9Y6R9 512 aa16.4■□□□□ 0.22
TUSC3-211ENST00000511342 GALR2O43603 387 aaPredicted RBP16.38■□□□□ 0.21
TUSC3-211ENST00000511342 DCBLD2Q96PD2 775 aa16.38■□□□□ 0.21
TUSC3-211ENST00000511342 POTEIP0CG38 1075 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 954.1 ms