RNA–Protein interactions for RNA: ENST00000511317.1

DDX60-204, Transcript of DExD/H-box helicase 60, humanhuman

TSL 3

Gene DDX60, Length 618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-204ENST00000511317 AEBP2Q6ZN18 517 aaPredicted RBP34.53■■■■□ 3.12
DDX60-204ENST00000511317 CHIC1Q5VXU3 224 aa33.03■■■□□ 2.88
DDX60-204ENST00000511317 SENP3Q9H4L4 574 aaPredicted RBP29.23■■■□□ 2.27
DDX60-204ENST00000511317 PHF23Q9BUL5 403 aaPredicted RBP29.08■■■□□ 2.25
DDX60-204ENST00000511317 FOXD1Q16676 465 aa27.31■■□□□ 1.96
DDX60-204ENST00000511317 PLPPR3Q6T4P5 718 aa26.47■■□□□ 1.83
DDX60-204ENST00000511317 PPP6R1Q9UPN7 881 aa25.86■■□□□ 1.73
DDX60-204ENST00000511317 ADRA2BP18089 450 aa25.74■■□□□ 1.71
DDX60-204ENST00000511317 PIAS4Q8N2W9 510 aaPredicted RBP25.52■■□□□ 1.68
DDX60-204ENST00000511317 MSH5O43196 834 aa25.28■■□□□ 1.64
DDX60-204ENST00000511317 POTEDQ86YR6 584 aa24.2■■□□□ 1.46
DDX60-204ENST00000511317 MAPK8IP2Q13387 824 aaPredicted RBP23.56■■□□□ 1.36
DDX60-204ENST00000511317 SCAF1Q9H7N4 1312 aaKnown RBP23.36■■□□□ 1.33
DDX60-204ENST00000511317 PPP4R3CPQ6ZMV5 832 aa23.29■■□□□ 1.32
DDX60-204ENST00000511317 DMRT2Q9Y5R5 561 aa23.29■■□□□ 1.32
DDX60-204ENST00000511317 CNKSR2Q8WXI2 1034 aa22.74■■□□□ 1.23
DDX60-204ENST00000511317 HOXD11P31277 338 aaPredicted RBP22.58■■□□□ 1.21
DDX60-204ENST00000511317 RNF216Q9NWF9 866 aaPredicted RBP22.46■■□□□ 1.19
DDX60-204ENST00000511317 NCBP3Q53F19 620 aaKnown RBP22.38■■□□□ 1.17
DDX60-204ENST00000511317 NPM3O75607 178 aaKnown RBP22.22■■□□□ 1.15
DDX60-204ENST00000511317 DCAF8L1A6NGE4 600 aa22.19■■□□□ 1.14
DDX60-204ENST00000511317 KCNA4P22459 653 aa22.13■■□□□ 1.13
DDX60-204ENST00000511317 RNF39Q9H2S5 420 aa21.71■■□□□ 1.07
DDX60-204ENST00000511317 DNAJC5BQ9UF47 199 aa21.69■■□□□ 1.06
DDX60-204ENST00000511317 CACNB1Q02641 598 aaPredicted RBP21.48■■□□□ 1.03
DDX60-204ENST00000511317 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.41■■□□□ 1.02
DDX60-204ENST00000511317 C1QBPQ07021 282 aaKnown RBP21.33■■□□□ 1.01
DDX60-204ENST00000511317 SLC4A2P04920 1241 aa21.19■□□□□ 0.98
DDX60-204ENST00000511317 U3KPZ7 1027 aaPredicted RBP21.13■□□□□ 0.97
DDX60-204ENST00000511317 SLC4A1APQ9BWU0 796 aaKnown RBP20.87■□□□□ 0.93
DDX60-204ENST00000511317 SPINK5Q9NQ38 1064 aaPredicted RBP20.72■□□□□ 0.91
DDX60-204ENST00000511317 CAPN15O75808 1086 aa20.54■□□□□ 0.88
DDX60-204ENST00000511317 MYCNP04198 464 aaPredicted RBP20.47■□□□□ 0.87
DDX60-204ENST00000511317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.46■□□□□ 0.87
DDX60-204ENST00000511317 HNRNPUL2Q1KMD3 747 aaKnown RBP20.46■□□□□ 0.87
DDX60-204ENST00000511317 FOXD4L1Q9NU39 408 aa20.46■□□□□ 0.87
DDX60-204ENST00000511317 ZBTB22O15209 634 aa20.44■□□□□ 0.86
DDX60-204ENST00000511317 DSG3P32926 999 aa20.44■□□□□ 0.86
DDX60-204ENST00000511317 SAMD1Q6SPF0 538 aaPredicted RBP20.41■□□□□ 0.86
DDX60-204ENST00000511317 APLP2Q06481 763 aa20.34■□□□□ 0.85
DDX60-204ENST00000511317 TRHP20396 242 aaPredicted RBP20.32■□□□□ 0.84
DDX60-204ENST00000511317 ZNF219Q9P2Y4 722 aaPredicted RBP20.27■□□□□ 0.84
DDX60-204ENST00000511317 ABCB7O75027 752 aa20.17■□□□□ 0.82
DDX60-204ENST00000511317 ATF5Q9Y2D1 282 aaPredicted RBP20.11■□□□□ 0.81
DDX60-204ENST00000511317 POLA2Q14181 598 aa19.88■□□□□ 0.77
DDX60-204ENST00000511317 ATXN8OSP0DMR3 200 aa19.77■□□□□ 0.76
DDX60-204ENST00000511317 CSRNP3Q8WYN3 585 aa19.74■□□□□ 0.75
DDX60-204ENST00000511317 EHMT2Q96KQ7 1210 aa19.6■□□□□ 0.73
DDX60-204ENST00000511317 ZBTB12Q9Y330 459 aaPredicted RBP19.41■□□□□ 0.7
DDX60-204ENST00000511317 RBM42Q9BTD8 480 aaKnown RBP19.36■□□□□ 0.69
DDX60-204ENST00000511317 OSCARQ8IYS5 282 aa19.27■□□□□ 0.68
DDX60-204ENST00000511317 MKRN4PQ13434 485 aaPredicted RBP19.2■□□□□ 0.66
DDX60-204ENST00000511317 FBLN2P98095 1184 aa19.08■□□□□ 0.64
DDX60-204ENST00000511317 AKT1S1Q96B36 256 aa19.05■□□□□ 0.64
DDX60-204ENST00000511317 POTEHQ6S545 545 aa18.99■□□□□ 0.63
DDX60-204ENST00000511317 SPDYE2BA6NHP3 402 aa18.91■□□□□ 0.62
DDX60-204ENST00000511317 SPDYE6P0CI01 402 aa18.91■□□□□ 0.62
DDX60-204ENST00000511317 SPDYE2Q495Y8 402 aa18.91■□□□□ 0.62
DDX60-204ENST00000511317 REM2Q8IYK8 340 aaPredicted RBP18.91■□□□□ 0.62
DDX60-204ENST00000511317 CHRDL2Q6WN34 429 aa18.89■□□□□ 0.61
DDX60-204ENST00000511317 SSUH2Q9Y2M2 353 aa18.78■□□□□ 0.6
DDX60-204ENST00000511317 PITPNM1O00562 1244 aa18.73■□□□□ 0.59
DDX60-204ENST00000511317 ZNF692Q9BU19 519 aaPredicted RBP18.72■□□□□ 0.59
DDX60-204ENST00000511317 PIP4P2Q8N4L2 257 aa18.55■□□□□ 0.56
DDX60-204ENST00000511317 FXR2P51116 673 aaKnown RBP eCLIP18.49■□□□□ 0.55
DDX60-204ENST00000511317 PABPN1Q86U42 306 aaKnown RBP eCLIP18.49■□□□□ 0.55
DDX60-204ENST00000511317 SPDYE1Q8NFV5 336 aaPredicted RBP18.46■□□□□ 0.55
DDX60-204ENST00000511317 CLEC11AQ9Y240 323 aa18.41■□□□□ 0.54
DDX60-204ENST00000511317 SPDYE4A6NLX3 237 aa18.34■□□□□ 0.53
DDX60-204ENST00000511317 PRKAR2AP13861 404 aaKnown RBP18.2■□□□□ 0.5
DDX60-204ENST00000511317 PRR29P0C7W0 189 aa18.15■□□□□ 0.5
DDX60-204ENST00000511317 CHADLQ6NUI6 762 aa18.12■□□□□ 0.49
DDX60-204ENST00000511317 PROM2Q8N271 834 aa18.08■□□□□ 0.48
DDX60-204ENST00000511317 HAX1O00165 279 aa18.03■□□□□ 0.48
DDX60-204ENST00000511317 EVX2Q03828 476 aa18.01■□□□□ 0.47
DDX60-204ENST00000511317 SP7Q8TDD2 431 aaPredicted RBP17.96■□□□□ 0.47
DDX60-204ENST00000511317 STAG3Q9UJ98 1225 aa17.96■□□□□ 0.47
DDX60-204ENST00000511317 CREBZFQ9NS37 354 aa17.9■□□□□ 0.46
DDX60-204ENST00000511317 C19orf67A6NJJ6 358 aa17.89■□□□□ 0.45
DDX60-204ENST00000511317 FARP1Q9Y4F1 1045 aaPredicted RBP17.85■□□□□ 0.45
DDX60-204ENST00000511317 FKBP8Q14318 412 aa17.8■□□□□ 0.44
DDX60-204ENST00000511317 MNX1P50219 401 aaPredicted RBP17.69■□□□□ 0.42
DDX60-204ENST00000511317 CD44P16070 742 aaKnown RBP17.64■□□□□ 0.41
DDX60-204ENST00000511317 GABBR2O75899 941 aa17.52■□□□□ 0.4
DDX60-204ENST00000511317 ZRANB1Q9UGI0 708 aa17.43■□□□□ 0.38
DDX60-204ENST00000511317 NPM1P06748 294 aaKnown RBP eCLIP17.42■□□□□ 0.38
DDX60-204ENST00000511317 ZNF579Q8NAF0 562 aaKnown RBP17.42■□□□□ 0.38
DDX60-204ENST00000511317 MIER1Q8N108 512 aa17.4■□□□□ 0.38
DDX60-204ENST00000511317 PLCD3Q8N3E9 789 aa17.3■□□□□ 0.36
DDX60-204ENST00000511317 PHF12Q96QT6 1004 aa17.29■□□□□ 0.36
DDX60-204ENST00000511317 PAK3O75914 559 aaPredicted RBP17.25■□□□□ 0.35
DDX60-204ENST00000511317 POTEIP0CG38 1075 aa17.25■□□□□ 0.35
DDX60-204ENST00000511317 PLEKHG5O94827 1062 aa17.24■□□□□ 0.35
DDX60-204ENST00000511317 CLCN6P51797 869 aa17.23■□□□□ 0.35
DDX60-204ENST00000511317 FBXO3Q9UK99 471 aa17.23■□□□□ 0.35
DDX60-204ENST00000511317 RASEFQ8IZ41 740 aa17.22■□□□□ 0.35
DDX60-204ENST00000511317 GALR2O43603 387 aaPredicted RBP17.21■□□□□ 0.35
DDX60-204ENST00000511317 TSPYL2Q9H2G4 693 aaPredicted RBP17.2■□□□□ 0.34
DDX60-204ENST00000511317 CCDC61Q9Y6R9 512 aa17.17■□□□□ 0.34
DDX60-204ENST00000511317 NUBP1P53384 320 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms