RNA–Protein interactions for RNA: ENST00000511145.1

FAM13A-215, Transcript of family with sequence similarity 13 member A, humanhuman

TSL 3

Gene FAM13A, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM13A-215ENST00000511145 AEBP2Q6ZN18 517 aaPredicted RBP23.74■■□□□ 1.39
FAM13A-215ENST00000511145 CHIC1Q5VXU3 224 aa22.69■■□□□ 1.22
FAM13A-215ENST00000511145 SENP3Q9H4L4 574 aaPredicted RBP20.45■□□□□ 0.86
FAM13A-215ENST00000511145 PHF23Q9BUL5 403 aaPredicted RBP20.07■□□□□ 0.8
FAM13A-215ENST00000511145 FOXD1Q16676 465 aa18.92■□□□□ 0.62
FAM13A-215ENST00000511145 PLPPR3Q6T4P5 718 aa18.21■□□□□ 0.51
FAM13A-215ENST00000511145 POTEDQ86YR6 584 aa18.18■□□□□ 0.5
FAM13A-215ENST00000511145 MSH5O43196 834 aa17.86■□□□□ 0.45
FAM13A-215ENST00000511145 PIAS4Q8N2W9 510 aaPredicted RBP17.77■□□□□ 0.44
FAM13A-215ENST00000511145 PPP6R1Q9UPN7 881 aa17.62■□□□□ 0.41
FAM13A-215ENST00000511145 ADRA2BP18089 450 aa17.61■□□□□ 0.41
FAM13A-215ENST00000511145 SCAF1Q9H7N4 1312 aaKnown RBP16.32■□□□□ 0.2
FAM13A-215ENST00000511145 DMRT2Q9Y5R5 561 aa16.17■□□□□ 0.18
FAM13A-215ENST00000511145 MAPK8IP2Q13387 824 aaPredicted RBP16.11■□□□□ 0.17
FAM13A-215ENST00000511145 PPP4R3CPQ6ZMV5 832 aa15.89■□□□□ 0.13
FAM13A-215ENST00000511145 CNKSR2Q8WXI2 1034 aa15.65■□□□□ 0.1
FAM13A-215ENST00000511145 HOXD11P31277 338 aaPredicted RBP15.58■□□□□ 0.08
FAM13A-215ENST00000511145 DCAF8L1A6NGE4 600 aa15.5■□□□□ 0.07
FAM13A-215ENST00000511145 RNF216Q9NWF9 866 aaPredicted RBP15.5■□□□□ 0.07
FAM13A-215ENST00000511145 CACNB1Q02641 598 aaPredicted RBP15.47■□□□□ 0.07
FAM13A-215ENST00000511145 NCBP3Q53F19 620 aaKnown RBP15.41■□□□□ 0.06
FAM13A-215ENST00000511145 RNF39Q9H2S5 420 aa15.15■□□□□ 0.02
FAM13A-215ENST00000511145 DNAJC5BQ9UF47 199 aa15.14■□□□□ 0.01
FAM13A-215ENST00000511145 NPM3O75607 178 aaKnown RBP15.04■□□□□ -0
FAM13A-215ENST00000511145 C1QBPQ07021 282 aaKnown RBP15□□□□□ -0.01
FAM13A-215ENST00000511145 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.87□□□□□ -0.03
FAM13A-215ENST00000511145 KCNA4P22459 653 aa14.74□□□□□ -0.05
FAM13A-215ENST00000511145 U3KPZ7 1027 aaPredicted RBP14.5□□□□□ -0.09
FAM13A-215ENST00000511145 APLP2Q06481 763 aa14.33□□□□□ -0.12
FAM13A-215ENST00000511145 SLC4A2P04920 1241 aa14.32□□□□□ -0.12
FAM13A-215ENST00000511145 CAPN15O75808 1086 aa14.31□□□□□ -0.12
FAM13A-215ENST00000511145 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.27□□□□□ -0.13
FAM13A-215ENST00000511145 HNRNPUL2Q1KMD3 747 aaKnown RBP14.27□□□□□ -0.13
FAM13A-215ENST00000511145 SPINK5Q9NQ38 1064 aaPredicted RBP14.24□□□□□ -0.13
FAM13A-215ENST00000511145 DSG3P32926 999 aa14.18□□□□□ -0.14
FAM13A-215ENST00000511145 POTEHQ6S545 545 aa14.17□□□□□ -0.14
FAM13A-215ENST00000511145 ZNF219Q9P2Y4 722 aaPredicted RBP14.15□□□□□ -0.14
FAM13A-215ENST00000511145 SAMD1Q6SPF0 538 aaPredicted RBP14.14□□□□□ -0.15
FAM13A-215ENST00000511145 TRHP20396 242 aaPredicted RBP14.05□□□□□ -0.16
FAM13A-215ENST00000511145 MYCNP04198 464 aaPredicted RBP14.02□□□□□ -0.17
FAM13A-215ENST00000511145 SLC4A1APQ9BWU0 796 aaKnown RBP14□□□□□ -0.17
FAM13A-215ENST00000511145 ABCB7O75027 752 aa13.91□□□□□ -0.18
FAM13A-215ENST00000511145 FOXD4L1Q9NU39 408 aa13.85□□□□□ -0.19
FAM13A-215ENST00000511145 RBM42Q9BTD8 480 aaKnown RBP13.69□□□□□ -0.22
FAM13A-215ENST00000511145 POLA2Q14181 598 aa13.67□□□□□ -0.22
FAM13A-215ENST00000511145 ZBTB12Q9Y330 459 aaPredicted RBP13.57□□□□□ -0.24
FAM13A-215ENST00000511145 ATF5Q9Y2D1 282 aaPredicted RBP13.5□□□□□ -0.25
FAM13A-215ENST00000511145 ZBTB22O15209 634 aa13.49□□□□□ -0.25
FAM13A-215ENST00000511145 ATXN8OSP0DMR3 200 aa13.47□□□□□ -0.25
FAM13A-215ENST00000511145 AKT1S1Q96B36 256 aa13.31□□□□□ -0.28
FAM13A-215ENST00000511145 CHRDL2Q6WN34 429 aa13.27□□□□□ -0.29
FAM13A-215ENST00000511145 OSCARQ8IYS5 282 aa13.24□□□□□ -0.29
FAM13A-215ENST00000511145 FBLN2P98095 1184 aa13.19□□□□□ -0.3
FAM13A-215ENST00000511145 REM2Q8IYK8 340 aaPredicted RBP13.1□□□□□ -0.31
FAM13A-215ENST00000511145 SPDYE2BA6NHP3 402 aa13.08□□□□□ -0.32
FAM13A-215ENST00000511145 SPDYE6P0CI01 402 aa13.08□□□□□ -0.32
FAM13A-215ENST00000511145 SPDYE2Q495Y8 402 aa13.08□□□□□ -0.32
FAM13A-215ENST00000511145 SP7Q8TDD2 431 aaPredicted RBP13□□□□□ -0.33
FAM13A-215ENST00000511145 PITPNM1O00562 1244 aa12.97□□□□□ -0.33
FAM13A-215ENST00000511145 MKRN4PQ13434 485 aaPredicted RBP12.92□□□□□ -0.34
FAM13A-215ENST00000511145 PIP4P2Q8N4L2 257 aa12.92□□□□□ -0.34
FAM13A-215ENST00000511145 CSRNP3Q8WYN3 585 aa12.92□□□□□ -0.34
FAM13A-215ENST00000511145 ZNF692Q9BU19 519 aaPredicted RBP12.87□□□□□ -0.35
FAM13A-215ENST00000511145 FXR2P51116 673 aaKnown RBP eCLIP12.85□□□□□ -0.35
FAM13A-215ENST00000511145 SPDYE1Q8NFV5 336 aaPredicted RBP12.85□□□□□ -0.35
FAM13A-215ENST00000511145 SSUH2Q9Y2M2 353 aa12.85□□□□□ -0.35
FAM13A-215ENST00000511145 EHMT2Q96KQ7 1210 aa12.8□□□□□ -0.36
FAM13A-215ENST00000511145 CLEC11AQ9Y240 323 aa12.76□□□□□ -0.37
FAM13A-215ENST00000511145 HAX1O00165 279 aa12.7□□□□□ -0.38
FAM13A-215ENST00000511145 PABPN1Q86U42 306 aaKnown RBP eCLIP12.66□□□□□ -0.38
FAM13A-215ENST00000511145 PRKAR2AP13861 404 aaKnown RBP12.65□□□□□ -0.38
FAM13A-215ENST00000511145 PRR29P0C7W0 189 aa12.58□□□□□ -0.4
FAM13A-215ENST00000511145 C19orf67A6NJJ6 358 aa12.45□□□□□ -0.42
FAM13A-215ENST00000511145 CHADLQ6NUI6 762 aa12.44□□□□□ -0.42
FAM13A-215ENST00000511145 STAG3Q9UJ98 1225 aa12.44□□□□□ -0.42
FAM13A-215ENST00000511145 SPDYE4A6NLX3 237 aa12.41□□□□□ -0.42
FAM13A-215ENST00000511145 EVX2Q03828 476 aa12.4□□□□□ -0.42
FAM13A-215ENST00000511145 FARP1Q9Y4F1 1045 aaPredicted RBP12.33□□□□□ -0.44
FAM13A-215ENST00000511145 CD44P16070 742 aaKnown RBP12.27□□□□□ -0.45
FAM13A-215ENST00000511145 CLCN6P51797 869 aa12.24□□□□□ -0.45
FAM13A-215ENST00000511145 GABBR2O75899 941 aa12.23□□□□□ -0.45
FAM13A-215ENST00000511145 CREBZFQ9NS37 354 aa12.2□□□□□ -0.46
FAM13A-215ENST00000511145 LHX8Q68G74 356 aa12.17□□□□□ -0.46
FAM13A-215ENST00000511145 PAK3O75914 559 aaPredicted RBP12.12□□□□□ -0.47
FAM13A-215ENST00000511145 NPM1P06748 294 aaKnown RBP eCLIP12.12□□□□□ -0.47
FAM13A-215ENST00000511145 PROM2Q8N271 834 aa12.1□□□□□ -0.47
FAM13A-215ENST00000511145 ZNF579Q8NAF0 562 aaKnown RBP12.1□□□□□ -0.47
FAM13A-215ENST00000511145 ZRANB1Q9UGI0 708 aa12.08□□□□□ -0.48
FAM13A-215ENST00000511145 DCBLD2Q96PD2 775 aa12□□□□□ -0.49
FAM13A-215ENST00000511145 PLEKHG5O94827 1062 aa11.99□□□□□ -0.49
FAM13A-215ENST00000511145 MNX1P50219 401 aaPredicted RBP11.97□□□□□ -0.49
FAM13A-215ENST00000511145 POTEIP0CG38 1075 aa11.9□□□□□ -0.5
FAM13A-215ENST00000511145 GALR2O43603 387 aaPredicted RBP11.87□□□□□ -0.51
FAM13A-215ENST00000511145 PHF12Q96QT6 1004 aa11.87□□□□□ -0.51
FAM13A-215ENST00000511145 PLSCR2Q9NRY7 297 aa11.87□□□□□ -0.51
FAM13A-215ENST00000511145 MIER1Q8N108 512 aa11.84□□□□□ -0.51
FAM13A-215ENST00000511145 ZBTB47Q9UFB7 747 aaPredicted RBP11.81□□□□□ -0.52
FAM13A-215ENST00000511145 PLCD3Q8N3E9 789 aa11.79□□□□□ -0.52
FAM13A-215ENST00000511145 FKBP8Q14318 412 aa11.78□□□□□ -0.52
FAM13A-215ENST00000511145 TSPYL2Q9H2G4 693 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms