RNA–Protein interactions for RNA: ENST00000511055.1

FIP1L1-209, Transcript of factor interacting with PAPOLA and CPSF1, humanhuman

TSL 2

Gene FIP1L1, Length 723 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIP1L1-209ENST00000511055 AEBP2Q6ZN18 517 aaPredicted RBP29.57■■■□□ 2.32
FIP1L1-209ENST00000511055 CHIC1Q5VXU3 224 aa28.3■■■□□ 2.12
FIP1L1-209ENST00000511055 SENP3Q9H4L4 574 aaPredicted RBP25.14■■□□□ 1.62
FIP1L1-209ENST00000511055 PHF23Q9BUL5 403 aaPredicted RBP24.92■■□□□ 1.58
FIP1L1-209ENST00000511055 FOXD1Q16676 465 aa23.45■■□□□ 1.34
FIP1L1-209ENST00000511055 PLPPR3Q6T4P5 718 aa22.73■■□□□ 1.23
FIP1L1-209ENST00000511055 PPP6R1Q9UPN7 881 aa22.17■■□□□ 1.14
FIP1L1-209ENST00000511055 ADRA2BP18089 450 aa22.14■■□□□ 1.13
FIP1L1-209ENST00000511055 PIAS4Q8N2W9 510 aaPredicted RBP21.97■■□□□ 1.11
FIP1L1-209ENST00000511055 MSH5O43196 834 aa21.79■■□□□ 1.08
FIP1L1-209ENST00000511055 POTEDQ86YR6 584 aa20.87■□□□□ 0.93
FIP1L1-209ENST00000511055 MAPK8IP2Q13387 824 aaPredicted RBP20.28■□□□□ 0.84
FIP1L1-209ENST00000511055 SCAF1Q9H7N4 1312 aaKnown RBP20.2■□□□□ 0.82
FIP1L1-209ENST00000511055 PPP4R3CPQ6ZMV5 832 aa20■□□□□ 0.79
FIP1L1-209ENST00000511055 DMRT2Q9Y5R5 561 aa19.97■□□□□ 0.79
FIP1L1-209ENST00000511055 CNKSR2Q8WXI2 1034 aa19.53■□□□□ 0.72
FIP1L1-209ENST00000511055 HOXD11P31277 338 aaPredicted RBP19.33■□□□□ 0.68
FIP1L1-209ENST00000511055 NCBP3Q53F19 620 aaKnown RBP19.29■□□□□ 0.68
FIP1L1-209ENST00000511055 DCAF8L1A6NGE4 600 aa19.27■□□□□ 0.68
FIP1L1-209ENST00000511055 RNF216Q9NWF9 866 aaPredicted RBP19.27■□□□□ 0.68
FIP1L1-209ENST00000511055 NPM3O75607 178 aaKnown RBP19.01■□□□□ 0.63
FIP1L1-209ENST00000511055 KCNA4P22459 653 aa18.91■□□□□ 0.62
FIP1L1-209ENST00000511055 RNF39Q9H2S5 420 aa18.63■□□□□ 0.57
FIP1L1-209ENST00000511055 CACNB1Q02641 598 aaPredicted RBP18.62■□□□□ 0.57
FIP1L1-209ENST00000511055 DNAJC5BQ9UF47 199 aa18.54■□□□□ 0.56
FIP1L1-209ENST00000511055 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.51■□□□□ 0.55
FIP1L1-209ENST00000511055 C1QBPQ07021 282 aaKnown RBP18.37■□□□□ 0.53
FIP1L1-209ENST00000511055 SLC4A2P04920 1241 aa18.1■□□□□ 0.49
FIP1L1-209ENST00000511055 U3KPZ7 1027 aaPredicted RBP18.1■□□□□ 0.49
FIP1L1-209ENST00000511055 SLC4A1APQ9BWU0 796 aaKnown RBP17.9■□□□□ 0.46
FIP1L1-209ENST00000511055 SPINK5Q9NQ38 1064 aaPredicted RBP17.81■□□□□ 0.44
FIP1L1-209ENST00000511055 CAPN15O75808 1086 aa17.78■□□□□ 0.44
FIP1L1-209ENST00000511055 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.64■□□□□ 0.41
FIP1L1-209ENST00000511055 HNRNPUL2Q1KMD3 747 aaKnown RBP17.64■□□□□ 0.41
FIP1L1-209ENST00000511055 APLP2Q06481 763 aa17.58■□□□□ 0.4
FIP1L1-209ENST00000511055 TRHP20396 242 aaPredicted RBP17.57■□□□□ 0.4
FIP1L1-209ENST00000511055 SAMD1Q6SPF0 538 aaPredicted RBP17.57■□□□□ 0.4
FIP1L1-209ENST00000511055 DSG3P32926 999 aa17.56■□□□□ 0.4
FIP1L1-209ENST00000511055 MYCNP04198 464 aaPredicted RBP17.54■□□□□ 0.4
FIP1L1-209ENST00000511055 FOXD4L1Q9NU39 408 aa17.51■□□□□ 0.39
FIP1L1-209ENST00000511055 ZNF219Q9P2Y4 722 aaPredicted RBP17.44■□□□□ 0.38
FIP1L1-209ENST00000511055 ABCB7O75027 752 aa17.39■□□□□ 0.37
FIP1L1-209ENST00000511055 ZBTB22O15209 634 aa17.38■□□□□ 0.37
FIP1L1-209ENST00000511055 ATF5Q9Y2D1 282 aaPredicted RBP17.2■□□□□ 0.34
FIP1L1-209ENST00000511055 POLA2Q14181 598 aa17.16■□□□□ 0.34
FIP1L1-209ENST00000511055 ATXN8OSP0DMR3 200 aa16.93■□□□□ 0.3
FIP1L1-209ENST00000511055 CSRNP3Q8WYN3 585 aa16.83■□□□□ 0.28
FIP1L1-209ENST00000511055 EHMT2Q96KQ7 1210 aa16.8■□□□□ 0.28
FIP1L1-209ENST00000511055 ZBTB12Q9Y330 459 aaPredicted RBP16.71■□□□□ 0.27
FIP1L1-209ENST00000511055 RBM42Q9BTD8 480 aaKnown RBP16.7■□□□□ 0.26
FIP1L1-209ENST00000511055 OSCARQ8IYS5 282 aa16.54■□□□□ 0.24
FIP1L1-209ENST00000511055 FBLN2P98095 1184 aa16.47■□□□□ 0.23
FIP1L1-209ENST00000511055 POTEHQ6S545 545 aa16.41■□□□□ 0.22
FIP1L1-209ENST00000511055 AKT1S1Q96B36 256 aa16.4■□□□□ 0.22
FIP1L1-209ENST00000511055 MKRN4PQ13434 485 aaPredicted RBP16.39■□□□□ 0.21
FIP1L1-209ENST00000511055 CHRDL2Q6WN34 429 aa16.29■□□□□ 0.2
FIP1L1-209ENST00000511055 REM2Q8IYK8 340 aaPredicted RBP16.28■□□□□ 0.2
FIP1L1-209ENST00000511055 SPDYE2BA6NHP3 402 aa16.24■□□□□ 0.19
FIP1L1-209ENST00000511055 SPDYE6P0CI01 402 aa16.24■□□□□ 0.19
FIP1L1-209ENST00000511055 SPDYE2Q495Y8 402 aa16.24■□□□□ 0.19
FIP1L1-209ENST00000511055 ZNF692Q9BU19 519 aaPredicted RBP16.17■□□□□ 0.18
FIP1L1-209ENST00000511055 PITPNM1O00562 1244 aa16.09■□□□□ 0.17
FIP1L1-209ENST00000511055 SSUH2Q9Y2M2 353 aa16.03■□□□□ 0.16
FIP1L1-209ENST00000511055 PIP4P2Q8N4L2 257 aa15.96■□□□□ 0.15
FIP1L1-209ENST00000511055 CLEC11AQ9Y240 323 aa15.96■□□□□ 0.15
FIP1L1-209ENST00000511055 PABPN1Q86U42 306 aaKnown RBP eCLIP15.93■□□□□ 0.14
FIP1L1-209ENST00000511055 SPDYE1Q8NFV5 336 aaPredicted RBP15.91■□□□□ 0.14
FIP1L1-209ENST00000511055 FXR2P51116 673 aaKnown RBP eCLIP15.88■□□□□ 0.13
FIP1L1-209ENST00000511055 SPDYE4A6NLX3 237 aa15.77■□□□□ 0.12
FIP1L1-209ENST00000511055 PRR29P0C7W0 189 aa15.71■□□□□ 0.11
FIP1L1-209ENST00000511055 PRKAR2AP13861 404 aaKnown RBP15.7■□□□□ 0.1
FIP1L1-209ENST00000511055 HAX1O00165 279 aa15.66■□□□□ 0.1
FIP1L1-209ENST00000511055 CHADLQ6NUI6 762 aa15.62■□□□□ 0.09
FIP1L1-209ENST00000511055 STAG3Q9UJ98 1225 aa15.5■□□□□ 0.07
FIP1L1-209ENST00000511055 SP7Q8TDD2 431 aaPredicted RBP15.49■□□□□ 0.07
FIP1L1-209ENST00000511055 EVX2Q03828 476 aa15.48■□□□□ 0.07
FIP1L1-209ENST00000511055 FARP1Q9Y4F1 1045 aaPredicted RBP15.38■□□□□ 0.05
FIP1L1-209ENST00000511055 C19orf67A6NJJ6 358 aa15.36■□□□□ 0.05
FIP1L1-209ENST00000511055 CREBZFQ9NS37 354 aa15.34■□□□□ 0.05
FIP1L1-209ENST00000511055 PROM2Q8N271 834 aa15.33■□□□□ 0.04
FIP1L1-209ENST00000511055 FKBP8Q14318 412 aa15.26■□□□□ 0.03
FIP1L1-209ENST00000511055 CD44P16070 742 aaKnown RBP15.21■□□□□ 0.03
FIP1L1-209ENST00000511055 GABBR2O75899 941 aa15.12■□□□□ 0.01
FIP1L1-209ENST00000511055 MNX1P50219 401 aaPredicted RBP15.09■□□□□ 0.01
FIP1L1-209ENST00000511055 MIER1Q8N108 512 aa15.08■□□□□ 0
FIP1L1-209ENST00000511055 NPM1P06748 294 aaKnown RBP eCLIP15.07■□□□□ 0
FIP1L1-209ENST00000511055 ZRANB1Q9UGI0 708 aa15.06■□□□□ 0
FIP1L1-209ENST00000511055 PLEKHG5O94827 1062 aa14.97□□□□□ -0.01
FIP1L1-209ENST00000511055 PAK3O75914 559 aaPredicted RBP14.96□□□□□ -0.01
FIP1L1-209ENST00000511055 PLCD3Q8N3E9 789 aa14.96□□□□□ -0.01
FIP1L1-209ENST00000511055 ZNF579Q8NAF0 562 aaKnown RBP14.93□□□□□ -0.02
FIP1L1-209ENST00000511055 CLCN6P51797 869 aa14.87□□□□□ -0.03
FIP1L1-209ENST00000511055 PHF12Q96QT6 1004 aa14.87□□□□□ -0.03
FIP1L1-209ENST00000511055 TSPYL2Q9H2G4 693 aaPredicted RBP14.87□□□□□ -0.03
FIP1L1-209ENST00000511055 FBXO3Q9UK99 471 aa14.83□□□□□ -0.04
FIP1L1-209ENST00000511055 GALR2O43603 387 aaPredicted RBP14.79□□□□□ -0.04
FIP1L1-209ENST00000511055 POTEIP0CG38 1075 aa14.79□□□□□ -0.04
FIP1L1-209ENST00000511055 DCBLD2Q96PD2 775 aa14.78□□□□□ -0.04
FIP1L1-209ENST00000511055 RASEFQ8IZ41 740 aa14.76□□□□□ -0.05
FIP1L1-209ENST00000511055 ZBTB47Q9UFB7 747 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms