RNA–Protein interactions for RNA: ENST00000511016.1

ATR-205, Transcript of ATR serine/threonine kinase, humanhuman

TSL 4

Gene ATR, Length 681 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-205ENST00000511016 AEBP2Q6ZN18 517 aaPredicted RBP27.26■■□□□ 1.95
ATR-205ENST00000511016 CHIC1Q5VXU3 224 aa26.25■■□□□ 1.79
ATR-205ENST00000511016 SENP3Q9H4L4 574 aaPredicted RBP23.31■■□□□ 1.32
ATR-205ENST00000511016 PHF23Q9BUL5 403 aaPredicted RBP22.99■■□□□ 1.27
ATR-205ENST00000511016 FOXD1Q16676 465 aa21.61■■□□□ 1.05
ATR-205ENST00000511016 PLPPR3Q6T4P5 718 aa21.15■□□□□ 0.98
ATR-205ENST00000511016 PPP6R1Q9UPN7 881 aa20.4■□□□□ 0.86
ATR-205ENST00000511016 ADRA2BP18089 450 aa20.37■□□□□ 0.85
ATR-205ENST00000511016 PIAS4Q8N2W9 510 aaPredicted RBP20.33■□□□□ 0.85
ATR-205ENST00000511016 MSH5O43196 834 aa20.21■□□□□ 0.83
ATR-205ENST00000511016 POTEDQ86YR6 584 aa19.11■□□□□ 0.65
ATR-205ENST00000511016 SCAF1Q9H7N4 1312 aaKnown RBP18.76■□□□□ 0.59
ATR-205ENST00000511016 MAPK8IP2Q13387 824 aaPredicted RBP18.6■□□□□ 0.57
ATR-205ENST00000511016 PPP4R3CPQ6ZMV5 832 aa18.54■□□□□ 0.56
ATR-205ENST00000511016 DMRT2Q9Y5R5 561 aa18.5■□□□□ 0.55
ATR-205ENST00000511016 CNKSR2Q8WXI2 1034 aa18.15■□□□□ 0.5
ATR-205ENST00000511016 NCBP3Q53F19 620 aaKnown RBP17.99■□□□□ 0.47
ATR-205ENST00000511016 HOXD11P31277 338 aaPredicted RBP17.94■□□□□ 0.46
ATR-205ENST00000511016 RNF216Q9NWF9 866 aaPredicted RBP17.91■□□□□ 0.46
ATR-205ENST00000511016 DCAF8L1A6NGE4 600 aa17.75■□□□□ 0.43
ATR-205ENST00000511016 NPM3O75607 178 aaKnown RBP17.65■□□□□ 0.42
ATR-205ENST00000511016 KCNA4P22459 653 aa17.57■□□□□ 0.4
ATR-205ENST00000511016 DNAJC5BQ9UF47 199 aa17.31■□□□□ 0.36
ATR-205ENST00000511016 RNF39Q9H2S5 420 aa17.22■□□□□ 0.35
ATR-205ENST00000511016 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.13■□□□□ 0.33
ATR-205ENST00000511016 CACNB1Q02641 598 aaPredicted RBP17.12■□□□□ 0.33
ATR-205ENST00000511016 C1QBPQ07021 282 aaKnown RBP17.02■□□□□ 0.32
ATR-205ENST00000511016 U3KPZ7 1027 aaPredicted RBP16.76■□□□□ 0.27
ATR-205ENST00000511016 SLC4A2P04920 1241 aa16.75■□□□□ 0.27
ATR-205ENST00000511016 SLC4A1APQ9BWU0 796 aaKnown RBP16.7■□□□□ 0.26
ATR-205ENST00000511016 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.5■□□□□ 0.23
ATR-205ENST00000511016 HNRNPUL2Q1KMD3 747 aaKnown RBP16.5■□□□□ 0.23
ATR-205ENST00000511016 APLP2Q06481 763 aa16.45■□□□□ 0.22
ATR-205ENST00000511016 CAPN15O75808 1086 aa16.42■□□□□ 0.22
ATR-205ENST00000511016 SAMD1Q6SPF0 538 aaPredicted RBP16.4■□□□□ 0.22
ATR-205ENST00000511016 SPINK5Q9NQ38 1064 aaPredicted RBP16.4■□□□□ 0.22
ATR-205ENST00000511016 MYCNP04198 464 aaPredicted RBP16.38■□□□□ 0.21
ATR-205ENST00000511016 FOXD4L1Q9NU39 408 aa16.37■□□□□ 0.21
ATR-205ENST00000511016 ZNF219Q9P2Y4 722 aaPredicted RBP16.25■□□□□ 0.19
ATR-205ENST00000511016 TRHP20396 242 aaPredicted RBP16.21■□□□□ 0.19
ATR-205ENST00000511016 DSG3P32926 999 aa16.21■□□□□ 0.19
ATR-205ENST00000511016 ZBTB22O15209 634 aa16.14■□□□□ 0.17
ATR-205ENST00000511016 ABCB7O75027 752 aa16.03■□□□□ 0.16
ATR-205ENST00000511016 ATF5Q9Y2D1 282 aaPredicted RBP15.87■□□□□ 0.13
ATR-205ENST00000511016 ATXN8OSP0DMR3 200 aa15.84■□□□□ 0.13
ATR-205ENST00000511016 POLA2Q14181 598 aa15.83■□□□□ 0.12
ATR-205ENST00000511016 EHMT2Q96KQ7 1210 aa15.69■□□□□ 0.1
ATR-205ENST00000511016 CSRNP3Q8WYN3 585 aa15.68■□□□□ 0.1
ATR-205ENST00000511016 ZBTB12Q9Y330 459 aaPredicted RBP15.64■□□□□ 0.09
ATR-205ENST00000511016 RBM42Q9BTD8 480 aaKnown RBP15.56■□□□□ 0.08
ATR-205ENST00000511016 FBLN2P98095 1184 aa15.36■□□□□ 0.05
ATR-205ENST00000511016 OSCARQ8IYS5 282 aa15.33■□□□□ 0.04
ATR-205ENST00000511016 AKT1S1Q96B36 256 aa15.22■□□□□ 0.03
ATR-205ENST00000511016 MKRN4PQ13434 485 aaPredicted RBP15.18■□□□□ 0.02
ATR-205ENST00000511016 SPDYE2BA6NHP3 402 aa15.14■□□□□ 0.01
ATR-205ENST00000511016 SPDYE6P0CI01 402 aa15.14■□□□□ 0.01
ATR-205ENST00000511016 SPDYE2Q495Y8 402 aa15.14■□□□□ 0.01
ATR-205ENST00000511016 POTEHQ6S545 545 aa15.07■□□□□ 0
ATR-205ENST00000511016 REM2Q8IYK8 340 aaPredicted RBP15.04■□□□□ -0
ATR-205ENST00000511016 CHRDL2Q6WN34 429 aa15.03■□□□□ -0
ATR-205ENST00000511016 ZNF692Q9BU19 519 aaPredicted RBP14.97□□□□□ -0.01
ATR-205ENST00000511016 SSUH2Q9Y2M2 353 aa14.94□□□□□ -0.02
ATR-205ENST00000511016 PITPNM1O00562 1244 aa14.87□□□□□ -0.03
ATR-205ENST00000511016 SPDYE1Q8NFV5 336 aaPredicted RBP14.8□□□□□ -0.04
ATR-205ENST00000511016 PABPN1Q86U42 306 aaKnown RBP eCLIP14.76□□□□□ -0.05
ATR-205ENST00000511016 CLEC11AQ9Y240 323 aa14.73□□□□□ -0.05
ATR-205ENST00000511016 PIP4P2Q8N4L2 257 aa14.72□□□□□ -0.05
ATR-205ENST00000511016 SPDYE4A6NLX3 237 aa14.68□□□□□ -0.06
ATR-205ENST00000511016 FXR2P51116 673 aaKnown RBP eCLIP14.68□□□□□ -0.06
ATR-205ENST00000511016 PRR29P0C7W0 189 aa14.54□□□□□ -0.08
ATR-205ENST00000511016 PRKAR2AP13861 404 aaKnown RBP14.51□□□□□ -0.09
ATR-205ENST00000511016 STAG3Q9UJ98 1225 aa14.48□□□□□ -0.09
ATR-205ENST00000511016 HAX1O00165 279 aa14.38□□□□□ -0.11
ATR-205ENST00000511016 CHADLQ6NUI6 762 aa14.37□□□□□ -0.11
ATR-205ENST00000511016 PROM2Q8N271 834 aa14.35□□□□□ -0.11
ATR-205ENST00000511016 SP7Q8TDD2 431 aaPredicted RBP14.28□□□□□ -0.12
ATR-205ENST00000511016 FKBP8Q14318 412 aa14.25□□□□□ -0.13
ATR-205ENST00000511016 FARP1Q9Y4F1 1045 aaPredicted RBP14.23□□□□□ -0.13
ATR-205ENST00000511016 CREBZFQ9NS37 354 aa14.21□□□□□ -0.13
ATR-205ENST00000511016 C19orf67A6NJJ6 358 aa14.2□□□□□ -0.14
ATR-205ENST00000511016 EVX2Q03828 476 aa14.13□□□□□ -0.15
ATR-205ENST00000511016 CD44P16070 742 aaKnown RBP14.08□□□□□ -0.16
ATR-205ENST00000511016 NPM1P06748 294 aaKnown RBP eCLIP14.03□□□□□ -0.16
ATR-205ENST00000511016 PLEKHG5O94827 1062 aa14.02□□□□□ -0.17
ATR-205ENST00000511016 MNX1P50219 401 aaPredicted RBP13.99□□□□□ -0.17
ATR-205ENST00000511016 MIER1Q8N108 512 aa13.96□□□□□ -0.17
ATR-205ENST00000511016 PAK3O75914 559 aaPredicted RBP13.95□□□□□ -0.18
ATR-205ENST00000511016 FBXO3Q9UK99 471 aa13.93□□□□□ -0.18
ATR-205ENST00000511016 PLCD3Q8N3E9 789 aa13.92□□□□□ -0.18
ATR-205ENST00000511016 ZRANB1Q9UGI0 708 aa13.92□□□□□ -0.18
ATR-205ENST00000511016 GABBR2O75899 941 aa13.91□□□□□ -0.18
ATR-205ENST00000511016 CLCN6P51797 869 aa13.89□□□□□ -0.19
ATR-205ENST00000511016 ZNF579Q8NAF0 562 aaKnown RBP13.88□□□□□ -0.19
ATR-205ENST00000511016 ZBTB47Q9UFB7 747 aaPredicted RBP13.85□□□□□ -0.19
ATR-205ENST00000511016 PHF12Q96QT6 1004 aa13.74□□□□□ -0.21
ATR-205ENST00000511016 TSPYL2Q9H2G4 693 aaPredicted RBP13.74□□□□□ -0.21
ATR-205ENST00000511016 VASPP50552 380 aaPredicted RBP13.71□□□□□ -0.21
ATR-205ENST00000511016 RASEFQ8IZ41 740 aa13.69□□□□□ -0.22
ATR-205ENST00000511016 GALR2O43603 387 aaPredicted RBP13.65□□□□□ -0.22
ATR-205ENST00000511016 DCBLD2Q96PD2 775 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms