RNA–Protein interactions for RNA: ENST00000510919.1

LRAT-208, Transcript of lecithin retinol acyltransferase, humanhuman

TSL 3

Gene LRAT, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRAT-208ENST00000510919 AEBP2Q6ZN18 517 aaPredicted RBP27.89■■■□□ 2.06
LRAT-208ENST00000510919 CHIC1Q5VXU3 224 aa26.69■■□□□ 1.86
LRAT-208ENST00000510919 SENP3Q9H4L4 574 aaPredicted RBP23.61■■□□□ 1.37
LRAT-208ENST00000510919 PHF23Q9BUL5 403 aaPredicted RBP23.51■■□□□ 1.35
LRAT-208ENST00000510919 FOXD1Q16676 465 aa22.06■■□□□ 1.12
LRAT-208ENST00000510919 PLPPR3Q6T4P5 718 aa21.44■■□□□ 1.02
LRAT-208ENST00000510919 PPP6R1Q9UPN7 881 aa20.94■□□□□ 0.94
LRAT-208ENST00000510919 ADRA2BP18089 450 aa20.91■□□□□ 0.94
LRAT-208ENST00000510919 PIAS4Q8N2W9 510 aaPredicted RBP20.71■□□□□ 0.91
LRAT-208ENST00000510919 MSH5O43196 834 aa20.41■□□□□ 0.86
LRAT-208ENST00000510919 POTEDQ86YR6 584 aa19.49■□□□□ 0.71
LRAT-208ENST00000510919 MAPK8IP2Q13387 824 aaPredicted RBP19.14■□□□□ 0.65
LRAT-208ENST00000510919 SCAF1Q9H7N4 1312 aaKnown RBP18.95■□□□□ 0.62
LRAT-208ENST00000510919 PPP4R3CPQ6ZMV5 832 aa18.91■□□□□ 0.62
LRAT-208ENST00000510919 DMRT2Q9Y5R5 561 aa18.79■□□□□ 0.6
LRAT-208ENST00000510919 CNKSR2Q8WXI2 1034 aa18.41■□□□□ 0.54
LRAT-208ENST00000510919 DCAF8L1A6NGE4 600 aa18.19■□□□□ 0.5
LRAT-208ENST00000510919 HOXD11P31277 338 aaPredicted RBP18.19■□□□□ 0.5
LRAT-208ENST00000510919 NCBP3Q53F19 620 aaKnown RBP18.19■□□□□ 0.5
LRAT-208ENST00000510919 RNF216Q9NWF9 866 aaPredicted RBP18.14■□□□□ 0.49
LRAT-208ENST00000510919 NPM3O75607 178 aaKnown RBP18.02■□□□□ 0.48
LRAT-208ENST00000510919 KCNA4P22459 653 aa18.02■□□□□ 0.48
LRAT-208ENST00000510919 RNF39Q9H2S5 420 aa17.49■□□□□ 0.39
LRAT-208ENST00000510919 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.45■□□□□ 0.38
LRAT-208ENST00000510919 CACNB1Q02641 598 aaPredicted RBP17.44■□□□□ 0.38
LRAT-208ENST00000510919 DNAJC5BQ9UF47 199 aa17.33■□□□□ 0.36
LRAT-208ENST00000510919 C1QBPQ07021 282 aaKnown RBP17.2■□□□□ 0.34
LRAT-208ENST00000510919 SLC4A2P04920 1241 aa17.14■□□□□ 0.33
LRAT-208ENST00000510919 U3KPZ7 1027 aaPredicted RBP17.09■□□□□ 0.33
LRAT-208ENST00000510919 SLC4A1APQ9BWU0 796 aaKnown RBP17.04■□□□□ 0.32
LRAT-208ENST00000510919 SPINK5Q9NQ38 1064 aaPredicted RBP16.82■□□□□ 0.28
LRAT-208ENST00000510919 CAPN15O75808 1086 aa16.76■□□□□ 0.27
LRAT-208ENST00000510919 FOXD4L1Q9NU39 408 aa16.62■□□□□ 0.25
LRAT-208ENST00000510919 TRHP20396 242 aaPredicted RBP16.6■□□□□ 0.25
LRAT-208ENST00000510919 ZBTB22O15209 634 aa16.59■□□□□ 0.25
LRAT-208ENST00000510919 MYCNP04198 464 aaPredicted RBP16.59■□□□□ 0.25
LRAT-208ENST00000510919 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.58■□□□□ 0.24
LRAT-208ENST00000510919 HNRNPUL2Q1KMD3 747 aaKnown RBP16.58■□□□□ 0.24
LRAT-208ENST00000510919 SAMD1Q6SPF0 538 aaPredicted RBP16.55■□□□□ 0.24
LRAT-208ENST00000510919 DSG3P32926 999 aa16.52■□□□□ 0.24
LRAT-208ENST00000510919 APLP2Q06481 763 aa16.49■□□□□ 0.23
LRAT-208ENST00000510919 ABCB7O75027 752 aa16.46■□□□□ 0.23
LRAT-208ENST00000510919 ZNF219Q9P2Y4 722 aaPredicted RBP16.42■□□□□ 0.22
LRAT-208ENST00000510919 ATF5Q9Y2D1 282 aaPredicted RBP16.34■□□□□ 0.21
LRAT-208ENST00000510919 POLA2Q14181 598 aa16.18■□□□□ 0.18
LRAT-208ENST00000510919 EHMT2Q96KQ7 1210 aa16.16■□□□□ 0.18
LRAT-208ENST00000510919 CSRNP3Q8WYN3 585 aa16.08■□□□□ 0.16
LRAT-208ENST00000510919 ATXN8OSP0DMR3 200 aa15.97■□□□□ 0.15
LRAT-208ENST00000510919 ZBTB12Q9Y330 459 aaPredicted RBP15.71■□□□□ 0.11
LRAT-208ENST00000510919 OSCARQ8IYS5 282 aa15.67■□□□□ 0.1
LRAT-208ENST00000510919 RBM42Q9BTD8 480 aaKnown RBP15.66■□□□□ 0.1
LRAT-208ENST00000510919 FBLN2P98095 1184 aa15.55■□□□□ 0.08
LRAT-208ENST00000510919 MKRN4PQ13434 485 aaPredicted RBP15.55■□□□□ 0.08
LRAT-208ENST00000510919 AKT1S1Q96B36 256 aa15.39■□□□□ 0.05
LRAT-208ENST00000510919 POTEHQ6S545 545 aa15.33■□□□□ 0.04
LRAT-208ENST00000510919 REM2Q8IYK8 340 aaPredicted RBP15.33■□□□□ 0.04
LRAT-208ENST00000510919 SPDYE2BA6NHP3 402 aa15.3■□□□□ 0.04
LRAT-208ENST00000510919 SPDYE6P0CI01 402 aa15.3■□□□□ 0.04
LRAT-208ENST00000510919 SPDYE2Q495Y8 402 aa15.3■□□□□ 0.04
LRAT-208ENST00000510919 CHRDL2Q6WN34 429 aa15.29■□□□□ 0.04
LRAT-208ENST00000510919 ZNF692Q9BU19 519 aaPredicted RBP15.26■□□□□ 0.03
LRAT-208ENST00000510919 PITPNM1O00562 1244 aa15.17■□□□□ 0.02
LRAT-208ENST00000510919 SSUH2Q9Y2M2 353 aa15.14■□□□□ 0.01
LRAT-208ENST00000510919 CLEC11AQ9Y240 323 aa15.08■□□□□ 0
LRAT-208ENST00000510919 PABPN1Q86U42 306 aaKnown RBP eCLIP15.07■□□□□ 0
LRAT-208ENST00000510919 PIP4P2Q8N4L2 257 aa15.01□□□□□ -0.01
LRAT-208ENST00000510919 SPDYE1Q8NFV5 336 aaPredicted RBP14.98□□□□□ -0.01
LRAT-208ENST00000510919 SPDYE4A6NLX3 237 aa14.96□□□□□ -0.01
LRAT-208ENST00000510919 FXR2P51116 673 aaKnown RBP eCLIP14.91□□□□□ -0.02
LRAT-208ENST00000510919 PRR29P0C7W0 189 aa14.8□□□□□ -0.04
LRAT-208ENST00000510919 PRKAR2AP13861 404 aaKnown RBP14.8□□□□□ -0.04
LRAT-208ENST00000510919 CHADLQ6NUI6 762 aa14.78□□□□□ -0.04
LRAT-208ENST00000510919 HAX1O00165 279 aa14.69□□□□□ -0.06
LRAT-208ENST00000510919 FKBP8Q14318 412 aa14.61□□□□□ -0.07
LRAT-208ENST00000510919 EVX2Q03828 476 aa14.58□□□□□ -0.08
LRAT-208ENST00000510919 STAG3Q9UJ98 1225 aa14.58□□□□□ -0.08
LRAT-208ENST00000510919 PROM2Q8N271 834 aa14.52□□□□□ -0.09
LRAT-208ENST00000510919 CREBZFQ9NS37 354 aa14.51□□□□□ -0.09
LRAT-208ENST00000510919 SP7Q8TDD2 431 aaPredicted RBP14.5□□□□□ -0.09
LRAT-208ENST00000510919 FARP1Q9Y4F1 1045 aaPredicted RBP14.49□□□□□ -0.09
LRAT-208ENST00000510919 C19orf67A6NJJ6 358 aa14.42□□□□□ -0.1
LRAT-208ENST00000510919 CD44P16070 742 aaKnown RBP14.34□□□□□ -0.11
LRAT-208ENST00000510919 MNX1P50219 401 aaPredicted RBP14.27□□□□□ -0.13
LRAT-208ENST00000510919 MIER1Q8N108 512 aa14.27□□□□□ -0.13
LRAT-208ENST00000510919 ZRANB1Q9UGI0 708 aa14.22□□□□□ -0.13
LRAT-208ENST00000510919 GABBR2O75899 941 aa14.19□□□□□ -0.14
LRAT-208ENST00000510919 PLCD3Q8N3E9 789 aa14.19□□□□□ -0.14
LRAT-208ENST00000510919 NPM1P06748 294 aaKnown RBP eCLIP14.18□□□□□ -0.14
LRAT-208ENST00000510919 PLEKHG5O94827 1062 aa14.13□□□□□ -0.15
LRAT-208ENST00000510919 PAK3O75914 559 aaPredicted RBP14.09□□□□□ -0.15
LRAT-208ENST00000510919 PHF12Q96QT6 1004 aa14.09□□□□□ -0.15
LRAT-208ENST00000510919 TSPYL2Q9H2G4 693 aaPredicted RBP14.09□□□□□ -0.15
LRAT-208ENST00000510919 ZNF579Q8NAF0 562 aaKnown RBP14.06□□□□□ -0.16
LRAT-208ENST00000510919 FBXO3Q9UK99 471 aa14.05□□□□□ -0.16
LRAT-208ENST00000510919 RASEFQ8IZ41 740 aa14□□□□□ -0.17
LRAT-208ENST00000510919 GALR2O43603 387 aaPredicted RBP13.97□□□□□ -0.17
LRAT-208ENST00000510919 VASPP50552 380 aaPredicted RBP13.96□□□□□ -0.17
LRAT-208ENST00000510919 POTEIP0CG38 1075 aa13.92□□□□□ -0.18
LRAT-208ENST00000510919 ZBTB47Q9UFB7 747 aaPredicted RBP13.91□□□□□ -0.18
LRAT-208ENST00000510919 NUBP1P53384 320 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms