RNA–Protein interactions for RNA: ENST00000510528.1

RAB28-206, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5

Gene RAB28, Length 193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-206ENST00000510528 AEBP2Q6ZN18 517 aaPredicted RBP26.3■■□□□ 1.8
RAB28-206ENST00000510528 CHIC1Q5VXU3 224 aa25.51■■□□□ 1.67
RAB28-206ENST00000510528 SENP3Q9H4L4 574 aaPredicted RBP22.56■■□□□ 1.2
RAB28-206ENST00000510528 PHF23Q9BUL5 403 aaPredicted RBP22.28■■□□□ 1.16
RAB28-206ENST00000510528 FOXD1Q16676 465 aa20.84■□□□□ 0.93
RAB28-206ENST00000510528 PLPPR3Q6T4P5 718 aa20.65■□□□□ 0.9
RAB28-206ENST00000510528 PPP6R1Q9UPN7 881 aa19.73■□□□□ 0.75
RAB28-206ENST00000510528 ADRA2BP18089 450 aa19.72■□□□□ 0.75
RAB28-206ENST00000510528 PIAS4Q8N2W9 510 aaPredicted RBP19.64■□□□□ 0.73
RAB28-206ENST00000510528 MSH5O43196 834 aa19.5■□□□□ 0.71
RAB28-206ENST00000510528 SCAF1Q9H7N4 1312 aaKnown RBP18.27■□□□□ 0.52
RAB28-206ENST00000510528 POTEDQ86YR6 584 aa18.16■□□□□ 0.5
RAB28-206ENST00000510528 PPP4R3CPQ6ZMV5 832 aa18.08■□□□□ 0.48
RAB28-206ENST00000510528 MAPK8IP2Q13387 824 aaPredicted RBP17.94■□□□□ 0.46
RAB28-206ENST00000510528 DMRT2Q9Y5R5 561 aa17.92■□□□□ 0.46
RAB28-206ENST00000510528 CNKSR2Q8WXI2 1034 aa17.7■□□□□ 0.42
RAB28-206ENST00000510528 NCBP3Q53F19 620 aaKnown RBP17.64■□□□□ 0.41
RAB28-206ENST00000510528 RNF216Q9NWF9 866 aaPredicted RBP17.44■□□□□ 0.38
RAB28-206ENST00000510528 HOXD11P31277 338 aaPredicted RBP17.42■□□□□ 0.38
RAB28-206ENST00000510528 NPM3O75607 178 aaKnown RBP17.25■□□□□ 0.35
RAB28-206ENST00000510528 KCNA4P22459 653 aa17.25■□□□□ 0.35
RAB28-206ENST00000510528 DCAF8L1A6NGE4 600 aa17.12■□□□□ 0.33
RAB28-206ENST00000510528 DNAJC5BQ9UF47 199 aa16.92■□□□□ 0.3
RAB28-206ENST00000510528 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.61■□□□□ 0.25
RAB28-206ENST00000510528 RNF39Q9H2S5 420 aa16.59■□□□□ 0.25
RAB28-206ENST00000510528 C1QBPQ07021 282 aaKnown RBP16.45■□□□□ 0.22
RAB28-206ENST00000510528 SLC4A1APQ9BWU0 796 aaKnown RBP16.44■□□□□ 0.22
RAB28-206ENST00000510528 CACNB1Q02641 598 aaPredicted RBP16.4■□□□□ 0.22
RAB28-206ENST00000510528 SLC4A2P04920 1241 aa16.31■□□□□ 0.2
RAB28-206ENST00000510528 U3KPZ7 1027 aaPredicted RBP16.25■□□□□ 0.19
RAB28-206ENST00000510528 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.13■□□□□ 0.17
RAB28-206ENST00000510528 HNRNPUL2Q1KMD3 747 aaKnown RBP16.13■□□□□ 0.17
RAB28-206ENST00000510528 APLP2Q06481 763 aa16.08■□□□□ 0.16
RAB28-206ENST00000510528 FOXD4L1Q9NU39 408 aa16.08■□□□□ 0.16
RAB28-206ENST00000510528 MYCNP04198 464 aaPredicted RBP16.04■□□□□ 0.16
RAB28-206ENST00000510528 SAMD1Q6SPF0 538 aaPredicted RBP16.01■□□□□ 0.15
RAB28-206ENST00000510528 CAPN15O75808 1086 aa15.88■□□□□ 0.13
RAB28-206ENST00000510528 SPINK5Q9NQ38 1064 aaPredicted RBP15.84■□□□□ 0.13
RAB28-206ENST00000510528 ZNF219Q9P2Y4 722 aaPredicted RBP15.82■□□□□ 0.12
RAB28-206ENST00000510528 ZBTB22O15209 634 aa15.81■□□□□ 0.12
RAB28-206ENST00000510528 TRHP20396 242 aaPredicted RBP15.7■□□□□ 0.1
RAB28-206ENST00000510528 DSG3P32926 999 aa15.66■□□□□ 0.1
RAB28-206ENST00000510528 ATXN8OSP0DMR3 200 aa15.6■□□□□ 0.09
RAB28-206ENST00000510528 EHMT2Q96KQ7 1210 aa15.55■□□□□ 0.08
RAB28-206ENST00000510528 CSRNP3Q8WYN3 585 aa15.52■□□□□ 0.08
RAB28-206ENST00000510528 ABCB7O75027 752 aa15.48■□□□□ 0.07
RAB28-206ENST00000510528 ATF5Q9Y2D1 282 aaPredicted RBP15.43■□□□□ 0.06
RAB28-206ENST00000510528 POLA2Q14181 598 aa15.37■□□□□ 0.05
RAB28-206ENST00000510528 ZBTB12Q9Y330 459 aaPredicted RBP15.28■□□□□ 0.04
RAB28-206ENST00000510528 RBM42Q9BTD8 480 aaKnown RBP15.09■□□□□ 0.01
RAB28-206ENST00000510528 FBLN2P98095 1184 aa15.03■□□□□ -0
RAB28-206ENST00000510528 OSCARQ8IYS5 282 aa14.87□□□□□ -0.03
RAB28-206ENST00000510528 MKRN4PQ13434 485 aaPredicted RBP14.8□□□□□ -0.04
RAB28-206ENST00000510528 SPDYE2BA6NHP3 402 aa14.77□□□□□ -0.05
RAB28-206ENST00000510528 SPDYE6P0CI01 402 aa14.77□□□□□ -0.05
RAB28-206ENST00000510528 SPDYE2Q495Y8 402 aa14.77□□□□□ -0.05
RAB28-206ENST00000510528 AKT1S1Q96B36 256 aa14.77□□□□□ -0.05
RAB28-206ENST00000510528 ZNF692Q9BU19 519 aaPredicted RBP14.6□□□□□ -0.07
RAB28-206ENST00000510528 SSUH2Q9Y2M2 353 aa14.57□□□□□ -0.08
RAB28-206ENST00000510528 REM2Q8IYK8 340 aaPredicted RBP14.55□□□□□ -0.08
RAB28-206ENST00000510528 CHRDL2Q6WN34 429 aa14.47□□□□□ -0.09
RAB28-206ENST00000510528 SPDYE1Q8NFV5 336 aaPredicted RBP14.41□□□□□ -0.1
RAB28-206ENST00000510528 SPDYE4A6NLX3 237 aa14.4□□□□□ -0.1
RAB28-206ENST00000510528 PITPNM1O00562 1244 aa14.38□□□□□ -0.11
RAB28-206ENST00000510528 PABPN1Q86U42 306 aaKnown RBP eCLIP14.38□□□□□ -0.11
RAB28-206ENST00000510528 POTEHQ6S545 545 aa14.35□□□□□ -0.11
RAB28-206ENST00000510528 CLEC11AQ9Y240 323 aa14.28□□□□□ -0.12
RAB28-206ENST00000510528 STAG3Q9UJ98 1225 aa14.2□□□□□ -0.14
RAB28-206ENST00000510528 FXR2P51116 673 aaKnown RBP eCLIP14.19□□□□□ -0.14
RAB28-206ENST00000510528 PIP4P2Q8N4L2 257 aa14.17□□□□□ -0.14
RAB28-206ENST00000510528 PRR29P0C7W0 189 aa14.14□□□□□ -0.15
RAB28-206ENST00000510528 PROM2Q8N271 834 aa14.13□□□□□ -0.15
RAB28-206ENST00000510528 FKBP8Q14318 412 aa14.09□□□□□ -0.15
RAB28-206ENST00000510528 PRKAR2AP13861 404 aaKnown RBP14.04□□□□□ -0.16
RAB28-206ENST00000510528 CHADLQ6NUI6 762 aa13.89□□□□□ -0.19
RAB28-206ENST00000510528 HAX1O00165 279 aa13.83□□□□□ -0.2
RAB28-206ENST00000510528 CREBZFQ9NS37 354 aa13.82□□□□□ -0.2
RAB28-206ENST00000510528 FBXO3Q9UK99 471 aa13.82□□□□□ -0.2
RAB28-206ENST00000510528 FARP1Q9Y4F1 1045 aaPredicted RBP13.81□□□□□ -0.2
RAB28-206ENST00000510528 PLEKHG5O94827 1062 aa13.8□□□□□ -0.2
RAB28-206ENST00000510528 C19orf67A6NJJ6 358 aa13.72□□□□□ -0.21
RAB28-206ENST00000510528 NPM1P06748 294 aaKnown RBP eCLIP13.72□□□□□ -0.21
RAB28-206ENST00000510528 MIER1Q8N108 512 aa13.68□□□□□ -0.22
RAB28-206ENST00000510528 SP7Q8TDD2 431 aaPredicted RBP13.68□□□□□ -0.22
RAB28-206ENST00000510528 PLCD3Q8N3E9 789 aa13.67□□□□□ -0.22
RAB28-206ENST00000510528 ZBTB47Q9UFB7 747 aaPredicted RBP13.66□□□□□ -0.22
RAB28-206ENST00000510528 CD44P16070 742 aaKnown RBP13.64□□□□□ -0.23
RAB28-206ENST00000510528 MNX1P50219 401 aaPredicted RBP13.62□□□□□ -0.23
RAB28-206ENST00000510528 PAK3O75914 559 aaPredicted RBP13.6□□□□□ -0.23
RAB28-206ENST00000510528 EVX2Q03828 476 aa13.55□□□□□ -0.24
RAB28-206ENST00000510528 VASPP50552 380 aaPredicted RBP13.54□□□□□ -0.24
RAB28-206ENST00000510528 CLCN6P51797 869 aa13.54□□□□□ -0.24
RAB28-206ENST00000510528 ZRANB1Q9UGI0 708 aa13.49□□□□□ -0.25
RAB28-206ENST00000510528 ZNF579Q8NAF0 562 aaKnown RBP13.47□□□□□ -0.25
RAB28-206ENST00000510528 KLHL34Q8N239 644 aa13.39□□□□□ -0.27
RAB28-206ENST00000510528 GABBR2O75899 941 aa13.38□□□□□ -0.27
RAB28-206ENST00000510528 TSPYL2Q9H2G4 693 aaPredicted RBP13.36□□□□□ -0.27
RAB28-206ENST00000510528 FAM212AQ96EL1 285 aa13.35□□□□□ -0.27
RAB28-206ENST00000510528 NUBP1P53384 320 aa13.34□□□□□ -0.27
RAB28-206ENST00000510528 RASEFQ8IZ41 740 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms