RNA–Protein interactions for RNA: ENST00000510297.1

CDH18-209, Transcript of cadherin 18, humanhuman

TSL 3

Gene CDH18, Length 899 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH18-209ENST00000510297 AEBP2Q6ZN18 517 aaPredicted RBP23.69■■□□□ 1.38
CDH18-209ENST00000510297 CHIC1Q5VXU3 224 aa21.97■■□□□ 1.11
CDH18-209ENST00000510297 SENP3Q9H4L4 574 aaPredicted RBP20.12■□□□□ 0.81
CDH18-209ENST00000510297 PHF23Q9BUL5 403 aaPredicted RBP19.85■□□□□ 0.77
CDH18-209ENST00000510297 FOXD1Q16676 465 aa18.91■□□□□ 0.62
CDH18-209ENST00000510297 POTEDQ86YR6 584 aa18.17■□□□□ 0.5
CDH18-209ENST00000510297 MSH5O43196 834 aa17.73■□□□□ 0.43
CDH18-209ENST00000510297 PIAS4Q8N2W9 510 aaPredicted RBP17.52■□□□□ 0.4
CDH18-209ENST00000510297 PPP6R1Q9UPN7 881 aa17.4■□□□□ 0.38
CDH18-209ENST00000510297 ADRA2BP18089 450 aa17.3■□□□□ 0.36
CDH18-209ENST00000510297 PLPPR3Q6T4P5 718 aa17.29■□□□□ 0.36
CDH18-209ENST00000510297 MAPK8IP2Q13387 824 aaPredicted RBP16.05■□□□□ 0.16
CDH18-209ENST00000510297 DMRT2Q9Y5R5 561 aa15.92■□□□□ 0.14
CDH18-209ENST00000510297 SCAF1Q9H7N4 1312 aaKnown RBP15.63■□□□□ 0.09
CDH18-209ENST00000510297 CACNB1Q02641 598 aaPredicted RBP15.54■□□□□ 0.08
CDH18-209ENST00000510297 DCAF8L1A6NGE4 600 aa15.31■□□□□ 0.04
CDH18-209ENST00000510297 RNF39Q9H2S5 420 aa15.17■□□□□ 0.02
CDH18-209ENST00000510297 PPP4R3CPQ6ZMV5 832 aa15.16■□□□□ 0.02
CDH18-209ENST00000510297 HOXD11P31277 338 aaPredicted RBP15.15■□□□□ 0.02
CDH18-209ENST00000510297 CNKSR2Q8WXI2 1034 aa14.92□□□□□ -0.02
CDH18-209ENST00000510297 RNF216Q9NWF9 866 aaPredicted RBP14.9□□□□□ -0.02
CDH18-209ENST00000510297 C1QBPQ07021 282 aaKnown RBP14.84□□□□□ -0.03
CDH18-209ENST00000510297 DNAJC5BQ9UF47 199 aa14.61□□□□□ -0.07
CDH18-209ENST00000510297 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.42□□□□□ -0.1
CDH18-209ENST00000510297 NCBP3Q53F19 620 aaKnown RBP14.33□□□□□ -0.12
CDH18-209ENST00000510297 NPM3O75607 178 aaKnown RBP14.27□□□□□ -0.13
CDH18-209ENST00000510297 U3KPZ7 1027 aaPredicted RBP14.15□□□□□ -0.14
CDH18-209ENST00000510297 POTEHQ6S545 545 aa14.12□□□□□ -0.15
CDH18-209ENST00000510297 SPINK5Q9NQ38 1064 aaPredicted RBP14.11□□□□□ -0.15
CDH18-209ENST00000510297 DSG3P32926 999 aa14.07□□□□□ -0.16
CDH18-209ENST00000510297 CAPN15O75808 1086 aa14.02□□□□□ -0.17
CDH18-209ENST00000510297 SLC4A2P04920 1241 aa13.78□□□□□ -0.2
CDH18-209ENST00000510297 ABCB7O75027 752 aa13.73□□□□□ -0.21
CDH18-209ENST00000510297 TRHP20396 242 aaPredicted RBP13.71□□□□□ -0.21
CDH18-209ENST00000510297 KCNA4P22459 653 aa13.65□□□□□ -0.22
CDH18-209ENST00000510297 ZNF219Q9P2Y4 722 aaPredicted RBP13.58□□□□□ -0.24
CDH18-209ENST00000510297 APLP2Q06481 763 aa13.48□□□□□ -0.25
CDH18-209ENST00000510297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.41□□□□□ -0.26
CDH18-209ENST00000510297 HNRNPUL2Q1KMD3 747 aaKnown RBP13.41□□□□□ -0.26
CDH18-209ENST00000510297 SAMD1Q6SPF0 538 aaPredicted RBP13.36□□□□□ -0.27
CDH18-209ENST00000510297 RBM42Q9BTD8 480 aaKnown RBP13.31□□□□□ -0.28
CDH18-209ENST00000510297 CHRDL2Q6WN34 429 aa13.29□□□□□ -0.28
CDH18-209ENST00000510297 POLA2Q14181 598 aa13.24□□□□□ -0.29
CDH18-209ENST00000510297 MYCNP04198 464 aaPredicted RBP13.13□□□□□ -0.31
CDH18-209ENST00000510297 SP7Q8TDD2 431 aaPredicted RBP13.02□□□□□ -0.33
CDH18-209ENST00000510297 ATF5Q9Y2D1 282 aaPredicted RBP13.02□□□□□ -0.33
CDH18-209ENST00000510297 AKT1S1Q96B36 256 aa12.96□□□□□ -0.33
CDH18-209ENST00000510297 REM2Q8IYK8 340 aaPredicted RBP12.91□□□□□ -0.34
CDH18-209ENST00000510297 PIP4P2Q8N4L2 257 aa12.91□□□□□ -0.34
CDH18-209ENST00000510297 NISCHQ9Y2I1 1504 aa12.88□□□□□ -0.35
CDH18-209ENST00000510297 OSCARQ8IYS5 282 aa12.88□□□□□ -0.35
CDH18-209ENST00000510297 ZBTB12Q9Y330 459 aaPredicted RBP12.81□□□□□ -0.36
CDH18-209ENST00000510297 PITPNM1O00562 1244 aa12.8□□□□□ -0.36
CDH18-209ENST00000510297 FOXD4L1Q9NU39 408 aa12.78□□□□□ -0.36
CDH18-209ENST00000510297 HAX1O00165 279 aa12.76□□□□□ -0.37
CDH18-209ENST00000510297 FXR2P51116 673 aaKnown RBP eCLIP12.73□□□□□ -0.37
CDH18-209ENST00000510297 SLC4A1APQ9BWU0 796 aaKnown RBP12.72□□□□□ -0.37
CDH18-209ENST00000510297 EVX2Q03828 476 aa12.69□□□□□ -0.38
CDH18-209ENST00000510297 ZBTB22O15209 634 aa12.6□□□□□ -0.39
CDH18-209ENST00000510297 SPDYE2BA6NHP3 402 aa12.43□□□□□ -0.42
CDH18-209ENST00000510297 SPDYE6P0CI01 402 aa12.43□□□□□ -0.42
CDH18-209ENST00000510297 PRKAR2AP13861 404 aaKnown RBP12.43□□□□□ -0.42
CDH18-209ENST00000510297 SPDYE2Q495Y8 402 aa12.43□□□□□ -0.42
CDH18-209ENST00000510297 CLEC11AQ9Y240 323 aa12.38□□□□□ -0.43
CDH18-209ENST00000510297 MKRN4PQ13434 485 aaPredicted RBP12.37□□□□□ -0.43
CDH18-209ENST00000510297 ATXN8OSP0DMR3 200 aa12.36□□□□□ -0.43
CDH18-209ENST00000510297 C19orf67A6NJJ6 358 aa12.35□□□□□ -0.43
CDH18-209ENST00000510297 FBLN2P98095 1184 aa12.35□□□□□ -0.43
CDH18-209ENST00000510297 SPDYE1Q8NFV5 336 aaPredicted RBP12.32□□□□□ -0.44
CDH18-209ENST00000510297 GABBR2O75899 941 aa12.29□□□□□ -0.44
CDH18-209ENST00000510297 SSUH2Q9Y2M2 353 aa12.28□□□□□ -0.44
CDH18-209ENST00000510297 CHADLQ6NUI6 762 aa12.26□□□□□ -0.45
CDH18-209ENST00000510297 ZNF692Q9BU19 519 aaPredicted RBP12.24□□□□□ -0.45
CDH18-209ENST00000510297 LHX8Q68G74 356 aa12.2□□□□□ -0.46
CDH18-209ENST00000510297 POTEIP0CG38 1075 aa12.1□□□□□ -0.47
CDH18-209ENST00000510297 PABPN1Q86U42 306 aaKnown RBP eCLIP12.09□□□□□ -0.47
CDH18-209ENST00000510297 PRR29P0C7W0 189 aa12.07□□□□□ -0.48
CDH18-209ENST00000510297 CD44P16070 742 aaKnown RBP12.01□□□□□ -0.49
CDH18-209ENST00000510297 FARP1Q9Y4F1 1045 aaPredicted RBP11.96□□□□□ -0.49
CDH18-209ENST00000510297 PLSCR2Q9NRY7 297 aa11.82□□□□□ -0.52
CDH18-209ENST00000510297 DCBLD2Q96PD2 775 aa11.8□□□□□ -0.52
CDH18-209ENST00000510297 ZNF579Q8NAF0 562 aaKnown RBP11.79□□□□□ -0.52
CDH18-209ENST00000510297 ZRANB1Q9UGI0 708 aa11.77□□□□□ -0.53
CDH18-209ENST00000510297 CLCN6P51797 869 aa11.75□□□□□ -0.53
CDH18-209ENST00000510297 CREBZFQ9NS37 354 aa11.75□□□□□ -0.53
CDH18-209ENST00000510297 GALR2O43603 387 aaPredicted RBP11.74□□□□□ -0.53
CDH18-209ENST00000510297 POTEB2H3BUK9 544 aa11.7□□□□□ -0.54
CDH18-209ENST00000510297 OTUD5Q96G74 571 aa11.7□□□□□ -0.54
CDH18-209ENST00000510297 PHF12Q96QT6 1004 aa11.64□□□□□ -0.55
CDH18-209ENST00000510297 PELP1Q8IZL8 1130 aaKnown RBP11.59□□□□□ -0.55
CDH18-209ENST00000510297 CSRNP3Q8WYN3 585 aa11.56□□□□□ -0.56
CDH18-209ENST00000510297 POTEMA6NI47 508 aa11.53□□□□□ -0.56
CDH18-209ENST00000510297 STAG3Q9UJ98 1225 aa11.53□□□□□ -0.56
CDH18-209ENST00000510297 MNX1P50219 401 aaPredicted RBP11.51□□□□□ -0.57
CDH18-209ENST00000510297 POTEGQ6S5H5 508 aa11.49□□□□□ -0.57
CDH18-209ENST00000510297 PAK3O75914 559 aaPredicted RBP11.48□□□□□ -0.57
CDH18-209ENST00000510297 POTEJP0CG39 1038 aa11.48□□□□□ -0.57
CDH18-209ENST00000510297 SPDYE4A6NLX3 237 aa11.47□□□□□ -0.57
CDH18-209ENST00000510297 MS4A3Q96HJ5 214 aa11.45□□□□□ -0.58
CDH18-209ENST00000510297 CCDC180Q9P1Z9 1646 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms