RNA–Protein interactions for RNA: ENST00000510227.1

ZCCHC9-209, Transcript of zinc finger CCHC-type containing 9, humanhuman

TSL 2

Gene ZCCHC9, Length 870 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC9-209ENST00000510227 AEBP2Q6ZN18 517 aaPredicted RBP31.41■■■□□ 2.62
ZCCHC9-209ENST00000510227 CHIC1Q5VXU3 224 aa29.42■■■□□ 2.3
ZCCHC9-209ENST00000510227 SENP3Q9H4L4 574 aaPredicted RBP26.88■■□□□ 1.89
ZCCHC9-209ENST00000510227 PHF23Q9BUL5 403 aaPredicted RBP26.44■■□□□ 1.82
ZCCHC9-209ENST00000510227 FOXD1Q16676 465 aa25.09■■□□□ 1.61
ZCCHC9-209ENST00000510227 POTEDQ86YR6 584 aa23.81■■□□□ 1.4
ZCCHC9-209ENST00000510227 MSH5O43196 834 aa23.66■■□□□ 1.38
ZCCHC9-209ENST00000510227 PIAS4Q8N2W9 510 aaPredicted RBP23.35■■□□□ 1.33
ZCCHC9-209ENST00000510227 PLPPR3Q6T4P5 718 aa23.31■■□□□ 1.32
ZCCHC9-209ENST00000510227 PPP6R1Q9UPN7 881 aa23.12■■□□□ 1.29
ZCCHC9-209ENST00000510227 ADRA2BP18089 450 aa23.02■■□□□ 1.28
ZCCHC9-209ENST00000510227 MAPK8IP2Q13387 824 aaPredicted RBP21.26■□□□□ 0.99
ZCCHC9-209ENST00000510227 DMRT2Q9Y5R5 561 aa21.25■□□□□ 0.99
ZCCHC9-209ENST00000510227 SCAF1Q9H7N4 1312 aaKnown RBP21.07■□□□□ 0.96
ZCCHC9-209ENST00000510227 CACNB1Q02641 598 aaPredicted RBP20.55■□□□□ 0.88
ZCCHC9-209ENST00000510227 DCAF8L1A6NGE4 600 aa20.38■□□□□ 0.85
ZCCHC9-209ENST00000510227 PPP4R3CPQ6ZMV5 832 aa20.37■□□□□ 0.85
ZCCHC9-209ENST00000510227 HOXD11P31277 338 aaPredicted RBP20.29■□□□□ 0.84
ZCCHC9-209ENST00000510227 RNF39Q9H2S5 420 aa20.14■□□□□ 0.81
ZCCHC9-209ENST00000510227 CNKSR2Q8WXI2 1034 aa20.09■□□□□ 0.81
ZCCHC9-209ENST00000510227 RNF216Q9NWF9 866 aaPredicted RBP20.02■□□□□ 0.8
ZCCHC9-209ENST00000510227 C1QBPQ07021 282 aaKnown RBP19.82■□□□□ 0.76
ZCCHC9-209ENST00000510227 DNAJC5BQ9UF47 199 aa19.68■□□□□ 0.74
ZCCHC9-209ENST00000510227 NCBP3Q53F19 620 aaKnown RBP19.46■□□□□ 0.71
ZCCHC9-209ENST00000510227 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.32■□□□□ 0.689e-8■□□□□ 8.3
ZCCHC9-209ENST00000510227 NPM3O75607 178 aaKnown RBP19.18■□□□□ 0.66
ZCCHC9-209ENST00000510227 U3KPZ7 1027 aaPredicted RBP18.88■□□□□ 0.61
ZCCHC9-209ENST00000510227 SPINK5Q9NQ38 1064 aaPredicted RBP18.73■□□□□ 0.59
ZCCHC9-209ENST00000510227 CAPN15O75808 1086 aa18.72■□□□□ 0.59
ZCCHC9-209ENST00000510227 DSG3P32926 999 aa18.71■□□□□ 0.59
ZCCHC9-209ENST00000510227 POTEHQ6S545 545 aa18.58■□□□□ 0.56
ZCCHC9-209ENST00000510227 SLC4A2P04920 1241 aa18.43■□□□□ 0.54
ZCCHC9-209ENST00000510227 KCNA4P22459 653 aa18.43■□□□□ 0.54
ZCCHC9-209ENST00000510227 TRHP20396 242 aaPredicted RBP18.31■□□□□ 0.52
ZCCHC9-209ENST00000510227 APLP2Q06481 763 aa18.31■□□□□ 0.52
ZCCHC9-209ENST00000510227 ZNF219Q9P2Y4 722 aaPredicted RBP18.27■□□□□ 0.52
ZCCHC9-209ENST00000510227 ABCB7O75027 752 aa18.25■□□□□ 0.51
ZCCHC9-209ENST00000510227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.19■□□□□ 0.5
ZCCHC9-209ENST00000510227 HNRNPUL2Q1KMD3 747 aaKnown RBP18.19■□□□□ 0.5
ZCCHC9-209ENST00000510227 SAMD1Q6SPF0 538 aaPredicted RBP18.07■□□□□ 0.48
ZCCHC9-209ENST00000510227 RBM42Q9BTD8 480 aaKnown RBP17.88■□□□□ 0.45
ZCCHC9-209ENST00000510227 MYCNP04198 464 aaPredicted RBP17.76■□□□□ 0.43
ZCCHC9-209ENST00000510227 POLA2Q14181 598 aa17.72■□□□□ 0.43
ZCCHC9-209ENST00000510227 CHRDL2Q6WN34 429 aa17.65■□□□□ 0.42
ZCCHC9-209ENST00000510227 AKT1S1Q96B36 256 aa17.37■□□□□ 0.37
ZCCHC9-209ENST00000510227 ATF5Q9Y2D1 282 aaPredicted RBP17.37■□□□□ 0.37
ZCCHC9-209ENST00000510227 ZBTB12Q9Y330 459 aaPredicted RBP17.35■□□□□ 0.37
ZCCHC9-209ENST00000510227 FOXD4L1Q9NU39 408 aa17.34■□□□□ 0.37
ZCCHC9-209ENST00000510227 SLC4A1APQ9BWU0 796 aaKnown RBP17.31■□□□□ 0.36
ZCCHC9-209ENST00000510227 SP7Q8TDD2 431 aaPredicted RBP17.22■□□□□ 0.35
ZCCHC9-209ENST00000510227 REM2Q8IYK8 340 aaPredicted RBP17.2■□□□□ 0.34
ZCCHC9-209ENST00000510227 OSCARQ8IYS5 282 aa17.19■□□□□ 0.34
ZCCHC9-209ENST00000510227 PIP4P2Q8N4L2 257 aa17.14■□□□□ 0.33
ZCCHC9-209ENST00000510227 PITPNM1O00562 1244 aa17.04■□□□□ 0.32
ZCCHC9-209ENST00000510227 FXR2P51116 673 aaKnown RBP eCLIP16.97■□□□□ 0.31
ZCCHC9-209ENST00000510227 ZBTB22O15209 634 aa16.94■□□□□ 0.3
ZCCHC9-209ENST00000510227 HAX1O00165 279 aa16.93■□□□□ 0.3
ZCCHC9-209ENST00000510227 ATXN8OSP0DMR3 200 aa16.85■□□□□ 0.29
ZCCHC9-209ENST00000510227 SPDYE2BA6NHP3 402 aa16.77■□□□□ 0.28
ZCCHC9-209ENST00000510227 SPDYE6P0CI01 402 aa16.77■□□□□ 0.28
ZCCHC9-209ENST00000510227 SPDYE2Q495Y8 402 aa16.77■□□□□ 0.28
ZCCHC9-209ENST00000510227 FBLN2P98095 1184 aa16.73■□□□□ 0.27
ZCCHC9-209ENST00000510227 EVX2Q03828 476 aa16.69■□□□□ 0.26
ZCCHC9-209ENST00000510227 PRKAR2AP13861 404 aaKnown RBP16.59■□□□□ 0.25
ZCCHC9-209ENST00000510227 SPDYE1Q8NFV5 336 aaPredicted RBP16.59■□□□□ 0.25
ZCCHC9-209ENST00000510227 MKRN4PQ13434 485 aaPredicted RBP16.56■□□□□ 0.24
ZCCHC9-209ENST00000510227 CLEC11AQ9Y240 323 aa16.56■□□□□ 0.24
ZCCHC9-209ENST00000510227 SSUH2Q9Y2M2 353 aa16.51■□□□□ 0.23
ZCCHC9-209ENST00000510227 ZNF692Q9BU19 519 aaPredicted RBP16.48■□□□□ 0.23
ZCCHC9-209ENST00000510227 C19orf67A6NJJ6 358 aa16.44■□□□□ 0.22
ZCCHC9-209ENST00000510227 GABBR2O75899 941 aa16.29■□□□□ 0.2
ZCCHC9-209ENST00000510227 CHADLQ6NUI6 762 aa16.29■□□□□ 0.2
ZCCHC9-209ENST00000510227 PABPN1Q86U42 306 aaKnown RBP eCLIP16.24■□□□□ 0.19
ZCCHC9-209ENST00000510227 PRR29P0C7W0 189 aa16.22■□□□□ 0.19
ZCCHC9-209ENST00000510227 LHX8Q68G74 356 aa16.13■□□□□ 0.17
ZCCHC9-209ENST00000510227 CD44P16070 742 aaKnown RBP16.03■□□□□ 0.16
ZCCHC9-209ENST00000510227 FARP1Q9Y4F1 1045 aaPredicted RBP16.02■□□□□ 0.16
ZCCHC9-209ENST00000510227 POTEIP0CG38 1075 aa15.95■□□□□ 0.14
ZCCHC9-209ENST00000510227 CLCN6P51797 869 aa15.9■□□□□ 0.14
ZCCHC9-209ENST00000510227 ZNF579Q8NAF0 562 aaKnown RBP15.78■□□□□ 0.12
ZCCHC9-209ENST00000510227 CSRNP3Q8WYN3 585 aa15.76■□□□□ 0.11
ZCCHC9-209ENST00000510227 DCBLD2Q96PD2 775 aa15.76■□□□□ 0.11
ZCCHC9-209ENST00000510227 ZRANB1Q9UGI0 708 aa15.74■□□□□ 0.11
ZCCHC9-209ENST00000510227 CREBZFQ9NS37 354 aa15.73■□□□□ 0.11
ZCCHC9-209ENST00000510227 STAG3Q9UJ98 1225 aa15.7■□□□□ 0.1
ZCCHC9-209ENST00000510227 GALR2O43603 387 aaPredicted RBP15.61■□□□□ 0.09
ZCCHC9-209ENST00000510227 SPDYE4A6NLX3 237 aa15.55■□□□□ 0.08
ZCCHC9-209ENST00000510227 PAK3O75914 559 aaPredicted RBP15.52■□□□□ 0.08
ZCCHC9-209ENST00000510227 PHF12Q96QT6 1004 aa15.49■□□□□ 0.07
ZCCHC9-209ENST00000510227 OTUD5Q96G74 571 aa15.45■□□□□ 0.06
ZCCHC9-209ENST00000510227 PLSCR2Q9NRY7 297 aa15.45■□□□□ 0.06
ZCCHC9-209ENST00000510227 NPM1P06748 294 aaKnown RBP eCLIP15.42■□□□□ 0.06
ZCCHC9-209ENST00000510227 MNX1P50219 401 aaPredicted RBP15.42■□□□□ 0.06
ZCCHC9-209ENST00000510227 POTEB2H3BUK9 544 aa15.41■□□□□ 0.06
ZCCHC9-209ENST00000510227 PELP1Q8IZL8 1130 aaKnown RBP15.33■□□□□ 0.04
ZCCHC9-209ENST00000510227 EHMT2Q96KQ7 1210 aa15.33■□□□□ 0.04
ZCCHC9-209ENST00000510227 MS4A3Q96HJ5 214 aa15.27■□□□□ 0.04
ZCCHC9-209ENST00000510227 ASTLQ6HA08 431 aaPredicted RBP15.25■□□□□ 0.03
ZCCHC9-209ENST00000510227 METRNQ9UJH8 293 aa15.23■□□□□ 0.03
ZCCHC9-209ENST00000510227 POTEMA6NI47 508 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms