RNA–Protein interactions for RNA: ENST00000510024.5

SEMA6A-209, Transcript of semaphorin 6A, humanhuman

TSL 3

Gene SEMA6A, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-209ENST00000510024 AEBP2Q6ZN18 517 aaPredicted RBP23.75■■□□□ 1.39
SEMA6A-209ENST00000510024 CHIC1Q5VXU3 224 aa23.41■■□□□ 1.34
SEMA6A-209ENST00000510024 PHF23Q9BUL5 403 aaPredicted RBP20.6■□□□□ 0.89
SEMA6A-209ENST00000510024 SENP3Q9H4L4 574 aaPredicted RBP20.12■□□□□ 0.81
SEMA6A-209ENST00000510024 PLPPR3Q6T4P5 718 aa19.08■□□□□ 0.64
SEMA6A-209ENST00000510024 FOXD1Q16676 465 aa18.64■□□□□ 0.57
SEMA6A-209ENST00000510024 PPP6R1Q9UPN7 881 aa18.09■□□□□ 0.49
SEMA6A-209ENST00000510024 ADRA2BP18089 450 aa18.05■□□□□ 0.48
SEMA6A-209ENST00000510024 PIAS4Q8N2W9 510 aaPredicted RBP17.59■□□□□ 0.41
SEMA6A-209ENST00000510024 MSH5O43196 834 aa17.12■□□□□ 0.33
SEMA6A-209ENST00000510024 PPP4R3CPQ6ZMV5 832 aa16.82■□□□□ 0.28
SEMA6A-209ENST00000510024 KCNA4P22459 653 aa16.65■□□□□ 0.26
SEMA6A-209ENST00000510024 SCAF1Q9H7N4 1312 aaKnown RBP16.53■□□□□ 0.24
SEMA6A-209ENST00000510024 NCBP3Q53F19 620 aaKnown RBP16.43■□□□□ 0.22
SEMA6A-209ENST00000510024 MAPK8IP2Q13387 824 aaPredicted RBP16.32■□□□□ 0.2
SEMA6A-209ENST00000510024 CNKSR2Q8WXI2 1034 aa16.32■□□□□ 0.2
SEMA6A-209ENST00000510024 NPM3O75607 178 aaKnown RBP16.21■□□□□ 0.19
SEMA6A-209ENST00000510024 DMRT2Q9Y5R5 561 aa16.11■□□□□ 0.17
SEMA6A-209ENST00000510024 RNF216Q9NWF9 866 aaPredicted RBP15.97■□□□□ 0.15
SEMA6A-209ENST00000510024 HOXD11P31277 338 aaPredicted RBP15.88■□□□□ 0.13
SEMA6A-209ENST00000510024 SLC4A1APQ9BWU0 796 aaKnown RBP15.88■□□□□ 0.13
SEMA6A-209ENST00000510024 DNAJC5BQ9UF47 199 aa15.85■□□□□ 0.13
SEMA6A-209ENST00000510024 EHMT2Q96KQ7 1210 aa15.59■□□□□ 0.09
SEMA6A-209ENST00000510024 CSRNP3Q8WYN3 585 aa15.42■□□□□ 0.06
SEMA6A-209ENST00000510024 ZBTB22O15209 634 aa15.35■□□□□ 0.05
SEMA6A-209ENST00000510024 SLC4A2P04920 1241 aa15.28■□□□□ 0.04
SEMA6A-209ENST00000510024 FOXD4L1Q9NU39 408 aa15.28■□□□□ 0.04
SEMA6A-209ENST00000510024 DCAF8L1A6NGE4 600 aa15.26■□□□□ 0.03
SEMA6A-209ENST00000510024 POTEDQ86YR6 584 aa15.23■□□□□ 0.03
SEMA6A-209ENST00000510024 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.03■□□□□ -0
SEMA6A-209ENST00000510024 MYCNP04198 464 aaPredicted RBP14.97□□□□□ -0.01
SEMA6A-209ENST00000510024 U3KPZ7 1027 aaPredicted RBP14.88□□□□□ -0.03
SEMA6A-209ENST00000510024 ATXN8OSP0DMR3 200 aa14.78□□□□□ -0.04
SEMA6A-209ENST00000510024 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.75□□□□□ -0.05
SEMA6A-209ENST00000510024 HNRNPUL2Q1KMD3 747 aaKnown RBP14.75□□□□□ -0.05
SEMA6A-209ENST00000510024 RNF39Q9H2S5 420 aa14.71□□□□□ -0.05
SEMA6A-209ENST00000510024 SAMD1Q6SPF0 538 aaPredicted RBP14.7□□□□□ -0.06
SEMA6A-209ENST00000510024 C1QBPQ07021 282 aaKnown RBP14.54□□□□□ -0.08
SEMA6A-209ENST00000510024 ATF5Q9Y2D1 282 aaPredicted RBP14.54□□□□□ -0.08
SEMA6A-209ENST00000510024 APLP2Q06481 763 aa14.53□□□□□ -0.08
SEMA6A-209ENST00000510024 SPINK5Q9NQ38 1064 aaPredicted RBP14.36□□□□□ -0.11
SEMA6A-209ENST00000510024 ZNF219Q9P2Y4 722 aaPredicted RBP14.3□□□□□ -0.12
SEMA6A-209ENST00000510024 CAPN15O75808 1086 aa14.25□□□□□ -0.13
SEMA6A-209ENST00000510024 TRHP20396 242 aaPredicted RBP14.23□□□□□ -0.13
SEMA6A-209ENST00000510024 CACNB1Q02641 598 aaPredicted RBP14.1□□□□□ -0.15
SEMA6A-209ENST00000510024 POLA2Q14181 598 aa14.08□□□□□ -0.16
SEMA6A-209ENST00000510024 DSG3P32926 999 aa14.05□□□□□ -0.16
SEMA6A-209ENST00000510024 ABCB7O75027 752 aa14□□□□□ -0.17
SEMA6A-209ENST00000510024 MKRN4PQ13434 485 aaPredicted RBP13.95□□□□□ -0.18
SEMA6A-209ENST00000510024 ZBTB12Q9Y330 459 aaPredicted RBP13.91□□□□□ -0.18
SEMA6A-209ENST00000510024 FBLN2P98095 1184 aa13.9□□□□□ -0.18
SEMA6A-209ENST00000510024 FKBP8Q14318 412 aa13.86□□□□□ -0.19
SEMA6A-209ENST00000510024 SPDYE4A6NLX3 237 aa13.69□□□□□ -0.22
SEMA6A-209ENST00000510024 OSCARQ8IYS5 282 aa13.6□□□□□ -0.23
SEMA6A-209ENST00000510024 PROM2Q8N271 834 aa13.59□□□□□ -0.23
SEMA6A-209ENST00000510024 SPDYE2BA6NHP3 402 aa13.55□□□□□ -0.24
SEMA6A-209ENST00000510024 SPDYE6P0CI01 402 aa13.55□□□□□ -0.24
SEMA6A-209ENST00000510024 SPDYE2Q495Y8 402 aa13.55□□□□□ -0.24
SEMA6A-209ENST00000510024 SSUH2Q9Y2M2 353 aa13.5□□□□□ -0.25
SEMA6A-209ENST00000510024 ZNF692Q9BU19 519 aaPredicted RBP13.48□□□□□ -0.25
SEMA6A-209ENST00000510024 RBM42Q9BTD8 480 aaKnown RBP13.37□□□□□ -0.27
SEMA6A-209ENST00000510024 FBXO3Q9UK99 471 aa13.36□□□□□ -0.27
SEMA6A-209ENST00000510024 PABPN1Q86U42 306 aaKnown RBP eCLIP13.31□□□□□ -0.28
SEMA6A-209ENST00000510024 AKT1S1Q96B36 256 aa13.26□□□□□ -0.29
SEMA6A-209ENST00000510024 VASPP50552 380 aaPredicted RBP13.17□□□□□ -0.3
SEMA6A-209ENST00000510024 STAG3Q9UJ98 1225 aa13.16□□□□□ -0.3
SEMA6A-209ENST00000510024 REM2Q8IYK8 340 aaPredicted RBP13.12□□□□□ -0.31
SEMA6A-209ENST00000510024 SPDYE1Q8NFV5 336 aaPredicted RBP13.09□□□□□ -0.31
SEMA6A-209ENST00000510024 AMER1Q5JTC6 1135 aaPredicted RBP13.02□□□□□ -0.33
SEMA6A-209ENST00000510024 IFNLR1Q8IU57 520 aaPredicted RBP13.02□□□□□ -0.33
SEMA6A-209ENST00000510024 RTN4Q9NQC3 1192 aaKnown RBP12.97□□□□□ -0.33
SEMA6A-209ENST00000510024 PITPNM1O00562 1244 aa12.96□□□□□ -0.33
SEMA6A-209ENST00000510024 CLEC11AQ9Y240 323 aa12.94□□□□□ -0.34
SEMA6A-209ENST00000510024 MIER1Q8N108 512 aa12.92□□□□□ -0.34
SEMA6A-209ENST00000510024 PLCD3Q8N3E9 789 aa12.92□□□□□ -0.34
SEMA6A-209ENST00000510024 PRR29P0C7W0 189 aa12.89□□□□□ -0.35
SEMA6A-209ENST00000510024 PLEKHG5O94827 1062 aa12.84□□□□□ -0.35
SEMA6A-209ENST00000510024 KLHL34Q8N239 644 aa12.82□□□□□ -0.36
SEMA6A-209ENST00000510024 CREBZFQ9NS37 354 aa12.82□□□□□ -0.36
SEMA6A-209ENST00000510024 ZBTB47Q9UFB7 747 aaPredicted RBP12.82□□□□□ -0.36
SEMA6A-209ENST00000510024 SPOCK2Q92563 424 aa12.81□□□□□ -0.36
SEMA6A-209ENST00000510024 MNX1P50219 401 aaPredicted RBP12.76□□□□□ -0.37
SEMA6A-209ENST00000510024 CHRDL2Q6WN34 429 aa12.72□□□□□ -0.37
SEMA6A-209ENST00000510024 FXR2P51116 673 aaKnown RBP eCLIP12.71□□□□□ -0.37
SEMA6A-209ENST00000510024 PKD2Q13563 968 aa12.67□□□□□ -0.38
SEMA6A-209ENST00000510024 NUBP1P53384 320 aa12.65□□□□□ -0.38
SEMA6A-209ENST00000510024 CHADLQ6NUI6 762 aa12.63□□□□□ -0.39
SEMA6A-209ENST00000510024 PRKAR2AP13861 404 aaKnown RBP12.61□□□□□ -0.39
SEMA6A-209ENST00000510024 PIP4P2Q8N4L2 257 aa12.61□□□□□ -0.39
SEMA6A-209ENST00000510024 NPM1P06748 294 aaKnown RBP eCLIP12.59□□□□□ -0.39
SEMA6A-209ENST00000510024 FARP1Q9Y4F1 1045 aaPredicted RBP12.58□□□□□ -0.4
SEMA6A-209ENST00000510024 GSE1Q14687 1217 aa12.53□□□□□ -0.4
SEMA6A-209ENST00000510024 RASEFQ8IZ41 740 aa12.52□□□□□ -0.41
SEMA6A-209ENST00000510024 CIZ1Q9ULV3 898 aaPredicted RBP12.52□□□□□ -0.41
SEMA6A-209ENST00000510024 TRIM41Q8WV44 630 aa12.5□□□□□ -0.41
SEMA6A-209ENST00000510024 FAM212AQ96EL1 285 aa12.5□□□□□ -0.41
SEMA6A-209ENST00000510024 ECM2O94769 699 aaPredicted RBP12.49□□□□□ -0.41
SEMA6A-209ENST00000510024 DCAF8Q5TAQ9 597 aa12.46□□□□□ -0.41
SEMA6A-209ENST00000510024 RGL2O15211 777 aa12.4□□□□□ -0.42
SEMA6A-209ENST00000510024 CHRM1P11229 460 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms