RNA–Protein interactions for RNA: ENST00000509941.1

SLIT2-209, Transcript of slit guidance ligand 2, humanhuman

TSL 3

Gene SLIT2, Length 739 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT2-209ENST00000509941 AEBP2Q6ZN18 517 aaPredicted RBP27.09■■□□□ 1.93
SLIT2-209ENST00000509941 CHIC1Q5VXU3 224 aa25.88■■□□□ 1.73
SLIT2-209ENST00000509941 SENP3Q9H4L4 574 aaPredicted RBP23.03■■□□□ 1.28
SLIT2-209ENST00000509941 PHF23Q9BUL5 403 aaPredicted RBP22.79■■□□□ 1.24
SLIT2-209ENST00000509941 FOXD1Q16676 465 aa21.48■■□□□ 1.03
SLIT2-209ENST00000509941 PLPPR3Q6T4P5 718 aa20.74■□□□□ 0.91
SLIT2-209ENST00000509941 PPP6R1Q9UPN7 881 aa20.25■□□□□ 0.83
SLIT2-209ENST00000509941 ADRA2BP18089 450 aa20.19■□□□□ 0.82
SLIT2-209ENST00000509941 PIAS4Q8N2W9 510 aaPredicted RBP20.1■□□□□ 0.81
SLIT2-209ENST00000509941 MSH5O43196 834 aa19.98■□□□□ 0.79
SLIT2-209ENST00000509941 POTEDQ86YR6 584 aa19.21■□□□□ 0.67
SLIT2-209ENST00000509941 MAPK8IP2Q13387 824 aaPredicted RBP18.5■□□□□ 0.55
SLIT2-209ENST00000509941 SCAF1Q9H7N4 1312 aaKnown RBP18.42■□□□□ 0.54
SLIT2-209ENST00000509941 DMRT2Q9Y5R5 561 aa18.3■□□□□ 0.52
SLIT2-209ENST00000509941 PPP4R3CPQ6ZMV5 832 aa18.23■□□□□ 0.51
SLIT2-209ENST00000509941 CNKSR2Q8WXI2 1034 aa17.83■□□□□ 0.44
SLIT2-209ENST00000509941 HOXD11P31277 338 aaPredicted RBP17.71■□□□□ 0.43
SLIT2-209ENST00000509941 RNF216Q9NWF9 866 aaPredicted RBP17.62■□□□□ 0.41
SLIT2-209ENST00000509941 NCBP3Q53F19 620 aaKnown RBP17.56■□□□□ 0.4
SLIT2-209ENST00000509941 DCAF8L1A6NGE4 600 aa17.55■□□□□ 0.4
SLIT2-209ENST00000509941 NPM3O75607 178 aaKnown RBP17.34■□□□□ 0.37
SLIT2-209ENST00000509941 KCNA4P22459 653 aa17.2■□□□□ 0.34
SLIT2-209ENST00000509941 RNF39Q9H2S5 420 aa17.09■□□□□ 0.33
SLIT2-209ENST00000509941 CACNB1Q02641 598 aaPredicted RBP17.05■□□□□ 0.32
SLIT2-209ENST00000509941 DNAJC5BQ9UF47 199 aa17.01■□□□□ 0.31
SLIT2-209ENST00000509941 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.86■□□□□ 0.29
SLIT2-209ENST00000509941 C1QBPQ07021 282 aaKnown RBP16.83■□□□□ 0.28
SLIT2-209ENST00000509941 U3KPZ7 1027 aaPredicted RBP16.56■□□□□ 0.24
SLIT2-209ENST00000509941 SLC4A2P04920 1241 aa16.53■□□□□ 0.24
SLIT2-209ENST00000509941 SPINK5Q9NQ38 1064 aaPredicted RBP16.28■□□□□ 0.2
SLIT2-209ENST00000509941 SLC4A1APQ9BWU0 796 aaKnown RBP16.25■□□□□ 0.19
SLIT2-209ENST00000509941 CAPN15O75808 1086 aa16.21■□□□□ 0.19
SLIT2-209ENST00000509941 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.09■□□□□ 0.17
SLIT2-209ENST00000509941 HNRNPUL2Q1KMD3 747 aaKnown RBP16.09■□□□□ 0.17
SLIT2-209ENST00000509941 DSG3P32926 999 aa16.08■□□□□ 0.16
SLIT2-209ENST00000509941 APLP2Q06481 763 aa16.05■□□□□ 0.16
SLIT2-209ENST00000509941 SAMD1Q6SPF0 538 aaPredicted RBP16.02■□□□□ 0.16
SLIT2-209ENST00000509941 MYCNP04198 464 aaPredicted RBP16.01■□□□□ 0.15
SLIT2-209ENST00000509941 TRHP20396 242 aaPredicted RBP16.01■□□□□ 0.15
SLIT2-209ENST00000509941 FOXD4L1Q9NU39 408 aa15.95■□□□□ 0.14
SLIT2-209ENST00000509941 ZNF219Q9P2Y4 722 aaPredicted RBP15.95■□□□□ 0.14
SLIT2-209ENST00000509941 ABCB7O75027 752 aa15.88■□□□□ 0.13
SLIT2-209ENST00000509941 ZBTB22O15209 634 aa15.82■□□□□ 0.12
SLIT2-209ENST00000509941 ATF5Q9Y2D1 282 aaPredicted RBP15.68■□□□□ 0.1
SLIT2-209ENST00000509941 POLA2Q14181 598 aa15.62■□□□□ 0.09
SLIT2-209ENST00000509941 ATXN8OSP0DMR3 200 aa15.43■□□□□ 0.06
SLIT2-209ENST00000509941 RBM42Q9BTD8 480 aaKnown RBP15.29■□□□□ 0.04
SLIT2-209ENST00000509941 ZBTB12Q9Y330 459 aaPredicted RBP15.27■□□□□ 0.04
SLIT2-209ENST00000509941 CSRNP3Q8WYN3 585 aa15.26■□□□□ 0.03
SLIT2-209ENST00000509941 EHMT2Q96KQ7 1210 aa15.17■□□□□ 0.02
SLIT2-209ENST00000509941 OSCARQ8IYS5 282 aa15.12■□□□□ 0.01
SLIT2-209ENST00000509941 POTEHQ6S545 545 aa15.08■□□□□ 0
SLIT2-209ENST00000509941 FBLN2P98095 1184 aa15□□□□□ -0.01
SLIT2-209ENST00000509941 AKT1S1Q96B36 256 aa15□□□□□ -0.01
SLIT2-209ENST00000509941 MKRN4PQ13434 485 aaPredicted RBP14.96□□□□□ -0.01
SLIT2-209ENST00000509941 CHRDL2Q6WN34 429 aa14.91□□□□□ -0.02
SLIT2-209ENST00000509941 REM2Q8IYK8 340 aaPredicted RBP14.88□□□□□ -0.03
SLIT2-209ENST00000509941 SPDYE2BA6NHP3 402 aa14.83□□□□□ -0.04
SLIT2-209ENST00000509941 SPDYE6P0CI01 402 aa14.83□□□□□ -0.04
SLIT2-209ENST00000509941 SPDYE2Q495Y8 402 aa14.83□□□□□ -0.04
SLIT2-209ENST00000509941 PITPNM1O00562 1244 aa14.73□□□□□ -0.05
SLIT2-209ENST00000509941 ZNF692Q9BU19 519 aaPredicted RBP14.7□□□□□ -0.06
SLIT2-209ENST00000509941 SSUH2Q9Y2M2 353 aa14.67□□□□□ -0.06
SLIT2-209ENST00000509941 PIP4P2Q8N4L2 257 aa14.61□□□□□ -0.07
SLIT2-209ENST00000509941 FXR2P51116 673 aaKnown RBP eCLIP14.55□□□□□ -0.08
SLIT2-209ENST00000509941 SPDYE1Q8NFV5 336 aaPredicted RBP14.53□□□□□ -0.08
SLIT2-209ENST00000509941 CLEC11AQ9Y240 323 aa14.52□□□□□ -0.09
SLIT2-209ENST00000509941 PABPN1Q86U42 306 aaKnown RBP eCLIP14.5□□□□□ -0.09
SLIT2-209ENST00000509941 PRKAR2AP13861 404 aaKnown RBP14.34□□□□□ -0.11
SLIT2-209ENST00000509941 SPDYE4A6NLX3 237 aa14.33□□□□□ -0.12
SLIT2-209ENST00000509941 HAX1O00165 279 aa14.29□□□□□ -0.12
SLIT2-209ENST00000509941 PRR29P0C7W0 189 aa14.29□□□□□ -0.12
SLIT2-209ENST00000509941 CHADLQ6NUI6 762 aa14.24□□□□□ -0.13
SLIT2-209ENST00000509941 SP7Q8TDD2 431 aaPredicted RBP14.22□□□□□ -0.13
SLIT2-209ENST00000509941 EVX2Q03828 476 aa14.17□□□□□ -0.14
SLIT2-209ENST00000509941 STAG3Q9UJ98 1225 aa14.1□□□□□ -0.15
SLIT2-209ENST00000509941 C19orf67A6NJJ6 358 aa14.08□□□□□ -0.16
SLIT2-209ENST00000509941 FARP1Q9Y4F1 1045 aaPredicted RBP14.03□□□□□ -0.16
SLIT2-209ENST00000509941 PROM2Q8N271 834 aa14.01□□□□□ -0.17
SLIT2-209ENST00000509941 CREBZFQ9NS37 354 aa14□□□□□ -0.17
SLIT2-209ENST00000509941 CD44P16070 742 aaKnown RBP13.89□□□□□ -0.19
SLIT2-209ENST00000509941 GABBR2O75899 941 aa13.83□□□□□ -0.2
SLIT2-209ENST00000509941 FKBP8Q14318 412 aa13.82□□□□□ -0.2
SLIT2-209ENST00000509941 MNX1P50219 401 aaPredicted RBP13.79□□□□□ -0.2
SLIT2-209ENST00000509941 ZRANB1Q9UGI0 708 aa13.73□□□□□ -0.21
SLIT2-209ENST00000509941 NPM1P06748 294 aaKnown RBP eCLIP13.71□□□□□ -0.21
SLIT2-209ENST00000509941 ZNF579Q8NAF0 562 aaKnown RBP13.68□□□□□ -0.22
SLIT2-209ENST00000509941 MIER1Q8N108 512 aa13.64□□□□□ -0.23
SLIT2-209ENST00000509941 PAK3O75914 559 aaPredicted RBP13.62□□□□□ -0.23
SLIT2-209ENST00000509941 CLCN6P51797 869 aa13.61□□□□□ -0.23
SLIT2-209ENST00000509941 PHF12Q96QT6 1004 aa13.58□□□□□ -0.24
SLIT2-209ENST00000509941 PLEKHG5O94827 1062 aa13.57□□□□□ -0.24
SLIT2-209ENST00000509941 POTEIP0CG38 1075 aa13.56□□□□□ -0.24
SLIT2-209ENST00000509941 PLCD3Q8N3E9 789 aa13.55□□□□□ -0.24
SLIT2-209ENST00000509941 GALR2O43603 387 aaPredicted RBP13.53□□□□□ -0.24
SLIT2-209ENST00000509941 TSPYL2Q9H2G4 693 aaPredicted RBP13.51□□□□□ -0.25
SLIT2-209ENST00000509941 DCBLD2Q96PD2 775 aa13.48□□□□□ -0.25
SLIT2-209ENST00000509941 RASEFQ8IZ41 740 aa13.45□□□□□ -0.26
SLIT2-209ENST00000509941 CCDC61Q9Y6R9 512 aa13.44□□□□□ -0.26
SLIT2-209ENST00000509941 FBXO3Q9UK99 471 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms