RNA–Protein interactions for RNA: ENST00000509262.1

C4orf36-211, Transcript of chromosome 4 open reading frame 36, humanhuman

TSL 2

Gene C4orf36, Length 434 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf36-211ENST00000509262 AEBP2Q6ZN18 517 aaPredicted RBP36.28■■■■□ 3.4
C4orf36-211ENST00000509262 CHIC1Q5VXU3 224 aa34.37■■■■□ 3.09
C4orf36-211ENST00000509262 SENP3Q9H4L4 574 aaPredicted RBP30.62■■■□□ 2.49
C4orf36-211ENST00000509262 PHF23Q9BUL5 403 aaPredicted RBP30.37■■■□□ 2.45
C4orf36-211ENST00000509262 FOXD1Q16676 465 aa28.73■■■□□ 2.19
C4orf36-211ENST00000509262 PLPPR3Q6T4P5 718 aa27.38■■□□□ 1.97
C4orf36-211ENST00000509262 PPP6R1Q9UPN7 881 aa27.06■■□□□ 1.92
C4orf36-211ENST00000509262 ADRA2BP18089 450 aa26.91■■□□□ 1.9
C4orf36-211ENST00000509262 PIAS4Q8N2W9 510 aaPredicted RBP26.74■■□□□ 1.87
C4orf36-211ENST00000509262 MSH5O43196 834 aa26.59■■□□□ 1.85
C4orf36-211ENST00000509262 POTEDQ86YR6 584 aa25.99■■□□□ 1.75
C4orf36-211ENST00000509262 MAPK8IP2Q13387 824 aaPredicted RBP24.73■■□□□ 1.55
C4orf36-211ENST00000509262 DMRT2Q9Y5R5 561 aa24.39■■□□□ 1.49
C4orf36-211ENST00000509262 SCAF1Q9H7N4 1312 aaKnown RBP24.26■■□□□ 1.47
C4orf36-211ENST00000509262 PPP4R3CPQ6ZMV5 832 aa24.11■■□□□ 1.45
C4orf36-211ENST00000509262 HOXD11P31277 338 aaPredicted RBP23.55■■□□□ 1.36
C4orf36-211ENST00000509262 CNKSR2Q8WXI2 1034 aa23.55■■□□□ 1.36
C4orf36-211ENST00000509262 RNF216Q9NWF9 866 aaPredicted RBP23.33■■□□□ 1.33
C4orf36-211ENST00000509262 DCAF8L1A6NGE4 600 aa23.27■■□□□ 1.32
C4orf36-211ENST00000509262 NCBP3Q53F19 620 aaKnown RBP23.01■■□□□ 1.27
C4orf36-211ENST00000509262 NPM3O75607 178 aaKnown RBP22.94■■□□□ 1.26
C4orf36-211ENST00000509262 RNF39Q9H2S5 420 aa22.86■■□□□ 1.25
C4orf36-211ENST00000509262 CACNB1Q02641 598 aaPredicted RBP22.8■■□□□ 1.24
C4orf36-211ENST00000509262 KCNA4P22459 653 aa22.64■■□□□ 1.21
C4orf36-211ENST00000509262 DNAJC5BQ9UF47 199 aa22.59■■□□□ 1.21
C4orf36-211ENST00000509262 C1QBPQ07021 282 aaKnown RBP22.41■■□□□ 1.18
C4orf36-211ENST00000509262 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.31■■□□□ 1.16
C4orf36-211ENST00000509262 U3KPZ7 1027 aaPredicted RBP22.03■■□□□ 1.12
C4orf36-211ENST00000509262 SLC4A2P04920 1241 aa21.97■■□□□ 1.11
C4orf36-211ENST00000509262 SPINK5Q9NQ38 1064 aaPredicted RBP21.71■■□□□ 1.07
C4orf36-211ENST00000509262 CAPN15O75808 1086 aa21.49■■□□□ 1.03
C4orf36-211ENST00000509262 DSG3P32926 999 aa21.47■■□□□ 1.03
C4orf36-211ENST00000509262 SLC4A1APQ9BWU0 796 aaKnown RBP21.25■□□□□ 0.99
C4orf36-211ENST00000509262 TRHP20396 242 aaPredicted RBP21.2■□□□□ 0.98
C4orf36-211ENST00000509262 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.12■□□□□ 0.97
C4orf36-211ENST00000509262 HNRNPUL2Q1KMD3 747 aaKnown RBP21.12■□□□□ 0.97
C4orf36-211ENST00000509262 ABCB7O75027 752 aa21.11■□□□□ 0.97
C4orf36-211ENST00000509262 SAMD1Q6SPF0 538 aaPredicted RBP21.08■□□□□ 0.97
C4orf36-211ENST00000509262 MYCNP04198 464 aaPredicted RBP21.06■□□□□ 0.96
C4orf36-211ENST00000509262 ZNF219Q9P2Y4 722 aaPredicted RBP21.05■□□□□ 0.96
C4orf36-211ENST00000509262 APLP2Q06481 763 aa21.02■□□□□ 0.96
C4orf36-211ENST00000509262 ZBTB22O15209 634 aa20.94■□□□□ 0.94
C4orf36-211ENST00000509262 FOXD4L1Q9NU39 408 aa20.93■□□□□ 0.94
C4orf36-211ENST00000509262 ATF5Q9Y2D1 282 aaPredicted RBP20.85■□□□□ 0.93
C4orf36-211ENST00000509262 POLA2Q14181 598 aa20.7■□□□□ 0.9
C4orf36-211ENST00000509262 POTEHQ6S545 545 aa20.32■□□□□ 0.84
C4orf36-211ENST00000509262 ATXN8OSP0DMR3 200 aa20.22■□□□□ 0.83
C4orf36-211ENST00000509262 RBM42Q9BTD8 480 aaKnown RBP20.22■□□□□ 0.83
C4orf36-211ENST00000509262 OSCARQ8IYS5 282 aa20.06■□□□□ 0.8
C4orf36-211ENST00000509262 ZBTB12Q9Y330 459 aaPredicted RBP20.06■□□□□ 0.8
C4orf36-211ENST00000509262 CSRNP3Q8WYN3 585 aa19.98■□□□□ 0.79
C4orf36-211ENST00000509262 CHRDL2Q6WN34 429 aa19.91■□□□□ 0.78
C4orf36-211ENST00000509262 AKT1S1Q96B36 256 aa19.89■□□□□ 0.77
C4orf36-211ENST00000509262 MKRN4PQ13434 485 aaPredicted RBP19.87■□□□□ 0.77
C4orf36-211ENST00000509262 REM2Q8IYK8 340 aaPredicted RBP19.81■□□□□ 0.76
C4orf36-211ENST00000509262 EHMT2Q96KQ7 1210 aa19.68■□□□□ 0.74
C4orf36-211ENST00000509262 FBLN2P98095 1184 aa19.65■□□□□ 0.74
C4orf36-211ENST00000509262 PITPNM1O00562 1244 aa19.62■□□□□ 0.73
C4orf36-211ENST00000509262 SPDYE2BA6NHP3 402 aa19.57■□□□□ 0.72
C4orf36-211ENST00000509262 SPDYE6P0CI01 402 aa19.57■□□□□ 0.72
C4orf36-211ENST00000509262 SPDYE2Q495Y8 402 aa19.57■□□□□ 0.72
C4orf36-211ENST00000509262 PIP4P2Q8N4L2 257 aa19.54■□□□□ 0.72
C4orf36-211ENST00000509262 SSUH2Q9Y2M2 353 aa19.44■□□□□ 0.7
C4orf36-211ENST00000509262 FXR2P51116 673 aaKnown RBP eCLIP19.42■□□□□ 0.7
C4orf36-211ENST00000509262 ZNF692Q9BU19 519 aaPredicted RBP19.37■□□□□ 0.69
C4orf36-211ENST00000509262 CLEC11AQ9Y240 323 aa19.18■□□□□ 0.66
C4orf36-211ENST00000509262 SPDYE1Q8NFV5 336 aaPredicted RBP19.17■□□□□ 0.66
C4orf36-211ENST00000509262 PABPN1Q86U42 306 aaKnown RBP eCLIP19.15■□□□□ 0.66
C4orf36-211ENST00000509262 EVX2Q03828 476 aa19.09■□□□□ 0.65
C4orf36-211ENST00000509262 SP7Q8TDD2 431 aaPredicted RBP19.08■□□□□ 0.64
C4orf36-211ENST00000509262 PRKAR2AP13861 404 aaKnown RBP19.05■□□□□ 0.64
C4orf36-211ENST00000509262 HAX1O00165 279 aa19.03■□□□□ 0.64
C4orf36-211ENST00000509262 CHADLQ6NUI6 762 aa18.95■□□□□ 0.62
C4orf36-211ENST00000509262 PRR29P0C7W0 189 aa18.85■□□□□ 0.61
C4orf36-211ENST00000509262 C19orf67A6NJJ6 358 aa18.79■□□□□ 0.6
C4orf36-211ENST00000509262 SPDYE4A6NLX3 237 aa18.79■□□□□ 0.6
C4orf36-211ENST00000509262 FARP1Q9Y4F1 1045 aaPredicted RBP18.6■□□□□ 0.57
C4orf36-211ENST00000509262 CREBZFQ9NS37 354 aa18.58■□□□□ 0.56
C4orf36-211ENST00000509262 GABBR2O75899 941 aa18.49■□□□□ 0.55
C4orf36-211ENST00000509262 PROM2Q8N271 834 aa18.47■□□□□ 0.55
C4orf36-211ENST00000509262 STAG3Q9UJ98 1225 aa18.45■□□□□ 0.54
C4orf36-211ENST00000509262 CD44P16070 742 aaKnown RBP18.42■□□□□ 0.54
C4orf36-211ENST00000509262 MNX1P50219 401 aaPredicted RBP18.35■□□□□ 0.53
C4orf36-211ENST00000509262 POTEIP0CG38 1075 aa18.24■□□□□ 0.51
C4orf36-211ENST00000509262 ZRANB1Q9UGI0 708 aa18.18■□□□□ 0.5
C4orf36-211ENST00000509262 ZNF579Q8NAF0 562 aaKnown RBP18.17■□□□□ 0.5
C4orf36-211ENST00000509262 PHF12Q96QT6 1004 aa18.05■□□□□ 0.48
C4orf36-211ENST00000509262 GALR2O43603 387 aaPredicted RBP18.04■□□□□ 0.48
C4orf36-211ENST00000509262 FKBP8Q14318 412 aa17.99■□□□□ 0.47
C4orf36-211ENST00000509262 NPM1P06748 294 aaKnown RBP eCLIP17.98■□□□□ 0.47
C4orf36-211ENST00000509262 CLCN6P51797 869 aa17.95■□□□□ 0.46
C4orf36-211ENST00000509262 LHX8Q68G74 356 aa17.89■□□□□ 0.45
C4orf36-211ENST00000509262 MIER1Q8N108 512 aa17.86■□□□□ 0.45
C4orf36-211ENST00000509262 PAK3O75914 559 aaPredicted RBP17.85■□□□□ 0.45
C4orf36-211ENST00000509262 DCBLD2Q96PD2 775 aa17.84■□□□□ 0.45
C4orf36-211ENST00000509262 TSPYL2Q9H2G4 693 aaPredicted RBP17.83■□□□□ 0.44
C4orf36-211ENST00000509262 CCDC61Q9Y6R9 512 aa17.8■□□□□ 0.44
C4orf36-211ENST00000509262 RASEFQ8IZ41 740 aa17.79■□□□□ 0.44
C4orf36-211ENST00000509262 MS4A3Q96HJ5 214 aa17.78■□□□□ 0.44
C4orf36-211ENST00000509262 PELP1Q8IZL8 1130 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms