RNA–Protein interactions for RNA: ENST00000509209.1

ALPK1-212, Transcript of alpha kinase 1, humanhuman

TSL 2

Gene ALPK1, Length 515 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK1-212ENST00000509209 AEBP2Q6ZN18 517 aaPredicted RBP28.57■■■□□ 2.16
ALPK1-212ENST00000509209 CHIC1Q5VXU3 224 aa28.56■■■□□ 2.16
ALPK1-212ENST00000509209 PHF23Q9BUL5 403 aaPredicted RBP25.15■■□□□ 1.62
ALPK1-212ENST00000509209 SENP3Q9H4L4 574 aaPredicted RBP24.24■■□□□ 1.47
ALPK1-212ENST00000509209 PLPPR3Q6T4P5 718 aa23.53■■□□□ 1.36
ALPK1-212ENST00000509209 FOXD1Q16676 465 aa22.37■■□□□ 1.17
ALPK1-212ENST00000509209 ADRA2BP18089 450 aa22.07■■□□□ 1.12
ALPK1-212ENST00000509209 PPP6R1Q9UPN7 881 aa22■■□□□ 1.11
ALPK1-212ENST00000509209 PIAS4Q8N2W9 510 aaPredicted RBP21.33■■□□□ 1.01
ALPK1-212ENST00000509209 KCNA4P22459 653 aa21.02■□□□□ 0.96
ALPK1-212ENST00000509209 PPP4R3CPQ6ZMV5 832 aa20.8■□□□□ 0.92
ALPK1-212ENST00000509209 NCBP3Q53F19 620 aaKnown RBP20.51■□□□□ 0.87
ALPK1-212ENST00000509209 MSH5O43196 834 aa20.44■□□□□ 0.86
ALPK1-212ENST00000509209 EHMT2Q96KQ7 1210 aa20.37■□□□□ 0.85
ALPK1-212ENST00000509209 SCAF1Q9H7N4 1312 aaKnown RBP20.27■□□□□ 0.83
ALPK1-212ENST00000509209 SLC4A1APQ9BWU0 796 aaKnown RBP20.18■□□□□ 0.82
ALPK1-212ENST00000509209 NPM3O75607 178 aaKnown RBP20.12■□□□□ 0.81
ALPK1-212ENST00000509209 CNKSR2Q8WXI2 1034 aa20.09■□□□□ 0.81
ALPK1-212ENST00000509209 MAPK8IP2Q13387 824 aaPredicted RBP19.82■□□□□ 0.76
ALPK1-212ENST00000509209 CSRNP3Q8WYN3 585 aa19.73■□□□□ 0.75
ALPK1-212ENST00000509209 RNF216Q9NWF9 866 aaPredicted RBP19.52■□□□□ 0.72
ALPK1-212ENST00000509209 DMRT2Q9Y5R5 561 aa19.42■□□□□ 0.7
ALPK1-212ENST00000509209 DNAJC5BQ9UF47 199 aa19.35■□□□□ 0.69
ALPK1-212ENST00000509209 ZBTB22O15209 634 aa19.3■□□□□ 0.68
ALPK1-212ENST00000509209 HOXD11P31277 338 aaPredicted RBP19.23■□□□□ 0.67
ALPK1-212ENST00000509209 FOXD4L1Q9NU39 408 aa19.18■□□□□ 0.66
ALPK1-212ENST00000509209 SLC4A2P04920 1241 aa18.8■□□□□ 0.6
ALPK1-212ENST00000509209 DCAF8L1A6NGE4 600 aa18.69■□□□□ 0.58
ALPK1-212ENST00000509209 MYCNP04198 464 aaPredicted RBP18.62■□□□□ 0.57
ALPK1-212ENST00000509209 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.46■□□□□ 0.55
ALPK1-212ENST00000509209 ATXN8OSP0DMR3 200 aa18.45■□□□□ 0.54
ALPK1-212ENST00000509209 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.21■□□□□ 0.51
ALPK1-212ENST00000509209 HNRNPUL2Q1KMD3 747 aaKnown RBP18.21■□□□□ 0.51
ALPK1-212ENST00000509209 SAMD1Q6SPF0 538 aaPredicted RBP18.15■□□□□ 0.5
ALPK1-212ENST00000509209 U3KPZ7 1027 aaPredicted RBP18.13■□□□□ 0.49
ALPK1-212ENST00000509209 ATF5Q9Y2D1 282 aaPredicted RBP18.01■□□□□ 0.47
ALPK1-212ENST00000509209 APLP2Q06481 763 aa17.9■□□□□ 0.46
ALPK1-212ENST00000509209 FKBP8Q14318 412 aa17.88■□□□□ 0.45
ALPK1-212ENST00000509209 ZNF219Q9P2Y4 722 aaPredicted RBP17.72■□□□□ 0.43
ALPK1-212ENST00000509209 RNF39Q9H2S5 420 aa17.53■□□□□ 0.4
ALPK1-212ENST00000509209 TRHP20396 242 aaPredicted RBP17.5■□□□□ 0.39
ALPK1-212ENST00000509209 POTEDQ86YR6 584 aa17.47■□□□□ 0.39
ALPK1-212ENST00000509209 SPINK5Q9NQ38 1064 aaPredicted RBP17.46■□□□□ 0.39
ALPK1-212ENST00000509209 CAPN15O75808 1086 aa17.44■□□□□ 0.38
ALPK1-212ENST00000509209 AMER1Q5JTC6 1135 aaPredicted RBP17.41■□□□□ 0.38
ALPK1-212ENST00000509209 C1QBPQ07021 282 aaKnown RBP17.39■□□□□ 0.37
ALPK1-212ENST00000509209 FBLN2P98095 1184 aa17.34■□□□□ 0.37
ALPK1-212ENST00000509209 RTN4Q9NQC3 1192 aaKnown RBP17.34■□□□□ 0.37
ALPK1-212ENST00000509209 POLA2Q14181 598 aa17.33■□□□□ 0.36
ALPK1-212ENST00000509209 SPDYE4A6NLX3 237 aa17.26■□□□□ 0.35
ALPK1-212ENST00000509209 MKRN4PQ13434 485 aaPredicted RBP17.25■□□□□ 0.35
ALPK1-212ENST00000509209 ABCB7O75027 752 aa17.14■□□□□ 0.33
ALPK1-212ENST00000509209 ZBTB12Q9Y330 459 aaPredicted RBP17.12■□□□□ 0.33
ALPK1-212ENST00000509209 FBXO3Q9UK99 471 aa17.11■□□□□ 0.33
ALPK1-212ENST00000509209 PROM2Q8N271 834 aa16.94■□□□□ 0.3
ALPK1-212ENST00000509209 DSG3P32926 999 aa16.9■□□□□ 0.3
ALPK1-212ENST00000509209 VASPP50552 380 aaPredicted RBP16.8■□□□□ 0.28
ALPK1-212ENST00000509209 ZNF692Q9BU19 519 aaPredicted RBP16.74■□□□□ 0.27
ALPK1-212ENST00000509209 SLC24A1O60721 1099 aa16.73■□□□□ 0.27
ALPK1-212ENST00000509209 CACNB1Q02641 598 aaPredicted RBP16.7■□□□□ 0.26
ALPK1-212ENST00000509209 OSCARQ8IYS5 282 aa16.7■□□□□ 0.26
ALPK1-212ENST00000509209 SPDYE2BA6NHP3 402 aa16.67■□□□□ 0.26
ALPK1-212ENST00000509209 SPDYE6P0CI01 402 aa16.67■□□□□ 0.26
ALPK1-212ENST00000509209 SPDYE2Q495Y8 402 aa16.67■□□□□ 0.26
ALPK1-212ENST00000509209 IFNLR1Q8IU57 520 aaPredicted RBP16.59■□□□□ 0.25
ALPK1-212ENST00000509209 SSUH2Q9Y2M2 353 aa16.55■□□□□ 0.24
ALPK1-212ENST00000509209 PABPN1Q86U42 306 aaKnown RBP eCLIP16.52■□□□□ 0.24
ALPK1-212ENST00000509209 STAG3Q9UJ98 1225 aa16.51■□□□□ 0.23
ALPK1-212ENST00000509209 KLHL34Q8N239 644 aa16.47■□□□□ 0.23
ALPK1-212ENST00000509209 PLCD3Q8N3E9 789 aa16.41■□□□□ 0.22
ALPK1-212ENST00000509209 MIER1Q8N108 512 aa16.35■□□□□ 0.21
ALPK1-212ENST00000509209 SPOCK2Q92563 424 aa16.35■□□□□ 0.21
ALPK1-212ENST00000509209 DCAF8L2P0C7V8 631 aa16.34■□□□□ 0.21
ALPK1-212ENST00000509209 PLEKHG5O94827 1062 aa16.27■□□□□ 0.2
ALPK1-212ENST00000509209 PKD2Q13563 968 aa16.26■□□□□ 0.19
ALPK1-212ENST00000509209 ZBTB47Q9UFB7 747 aaPredicted RBP16.18■□□□□ 0.18
ALPK1-212ENST00000509209 RBM42Q9BTD8 480 aaKnown RBP16.16■□□□□ 0.18
ALPK1-212ENST00000509209 ECM2O94769 699 aaPredicted RBP16.15■□□□□ 0.18
ALPK1-212ENST00000509209 PLCB2Q00722 1185 aa16.06■□□□□ 0.16
ALPK1-212ENST00000509209 SPDYE1Q8NFV5 336 aaPredicted RBP16.06■□□□□ 0.16
ALPK1-212ENST00000509209 AKT1S1Q96B36 256 aa16.06■□□□□ 0.16
ALPK1-212ENST00000509209 CIZ1Q9ULV3 898 aaPredicted RBP16.04■□□□□ 0.16
ALPK1-212ENST00000509209 CLEC11AQ9Y240 323 aa15.99■□□□□ 0.15
ALPK1-212ENST00000509209 PRR29P0C7W0 189 aa15.92■□□□□ 0.14
ALPK1-212ENST00000509209 REM2Q8IYK8 340 aaPredicted RBP15.91■□□□□ 0.14
ALPK1-212ENST00000509209 RGL2O15211 777 aa15.9■□□□□ 0.14
ALPK1-212ENST00000509209 HAP1P54257 671 aaPredicted RBP15.9■□□□□ 0.14
ALPK1-212ENST00000509209 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.88■□□□□ 0.13
ALPK1-212ENST00000509209 TRIM41Q8WV44 630 aa15.86■□□□□ 0.13
ALPK1-212ENST00000509209 BBXQ8WY36 941 aaPredicted RBP15.84■□□□□ 0.13
ALPK1-212ENST00000509209 GSE1Q14687 1217 aa15.83■□□□□ 0.12
ALPK1-212ENST00000509209 NPM1P06748 294 aaKnown RBP eCLIP15.78■□□□□ 0.12
ALPK1-212ENST00000509209 CREBZFQ9NS37 354 aa15.78■□□□□ 0.12
ALPK1-212ENST00000509209 DCAF8Q5TAQ9 597 aa15.77■□□□□ 0.12
ALPK1-212ENST00000509209 NUBP1P53384 320 aa15.75■□□□□ 0.11
ALPK1-212ENST00000509209 CHGAP10645 457 aaKnown RBP15.73■□□□□ 0.11
ALPK1-212ENST00000509209 PAXIP1Q6ZW49 1069 aaPredicted RBP15.72■□□□□ 0.11
ALPK1-212ENST00000509209 FAM212AQ96EL1 285 aa15.72■□□□□ 0.11
ALPK1-212ENST00000509209 PITPNM1O00562 1244 aa15.71■□□□□ 0.11
ALPK1-212ENST00000509209 CFAP44Q96MT7 982 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms