RNA–Protein interactions for RNA: ENST00000509150.1

ATP2C1-216, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 3

Gene ATP2C1, Length 573 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-216ENST00000509150 AEBP2Q6ZN18 517 aaPredicted RBP25.04■■□□□ 1.6
ATP2C1-216ENST00000509150 CHIC1Q5VXU3 224 aa23.92■■□□□ 1.42
ATP2C1-216ENST00000509150 SENP3Q9H4L4 574 aaPredicted RBP21.2■□□□□ 0.98
ATP2C1-216ENST00000509150 PHF23Q9BUL5 403 aaPredicted RBP21.05■□□□□ 0.96
ATP2C1-216ENST00000509150 FOXD1Q16676 465 aa19.82■□□□□ 0.76
ATP2C1-216ENST00000509150 PLPPR3Q6T4P5 718 aa19.19■□□□□ 0.66
ATP2C1-216ENST00000509150 PPP6R1Q9UPN7 881 aa18.75■□□□□ 0.59
ATP2C1-216ENST00000509150 POTEDQ86YR6 584 aa18.74■□□□□ 0.59
ATP2C1-216ENST00000509150 ADRA2BP18089 450 aa18.73■□□□□ 0.59
ATP2C1-216ENST00000509150 PIAS4Q8N2W9 510 aaPredicted RBP18.6■□□□□ 0.57
ATP2C1-216ENST00000509150 MSH5O43196 834 aa18.36■□□□□ 0.53
ATP2C1-216ENST00000509150 MAPK8IP2Q13387 824 aaPredicted RBP17.14■□□□□ 0.33
ATP2C1-216ENST00000509150 SCAF1Q9H7N4 1312 aaKnown RBP16.96■□□□□ 0.31
ATP2C1-216ENST00000509150 PPP4R3CPQ6ZMV5 832 aa16.91■□□□□ 0.3
ATP2C1-216ENST00000509150 DMRT2Q9Y5R5 561 aa16.87■□□□□ 0.29
ATP2C1-216ENST00000509150 CNKSR2Q8WXI2 1034 aa16.48■□□□□ 0.23
ATP2C1-216ENST00000509150 HOXD11P31277 338 aaPredicted RBP16.31■□□□□ 0.2
ATP2C1-216ENST00000509150 DCAF8L1A6NGE4 600 aa16.3■□□□□ 0.2
ATP2C1-216ENST00000509150 RNF216Q9NWF9 866 aaPredicted RBP16.26■□□□□ 0.19
ATP2C1-216ENST00000509150 NCBP3Q53F19 620 aaKnown RBP16.25■□□□□ 0.19
ATP2C1-216ENST00000509150 NPM3O75607 178 aaKnown RBP16.12■□□□□ 0.17
ATP2C1-216ENST00000509150 KCNA4P22459 653 aa16.07■□□□□ 0.16
ATP2C1-216ENST00000509150 RNF39Q9H2S5 420 aa15.73■□□□□ 0.11
ATP2C1-216ENST00000509150 CACNB1Q02641 598 aaPredicted RBP15.71■□□□□ 0.11
ATP2C1-216ENST00000509150 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.62■□□□□ 0.09
ATP2C1-216ENST00000509150 DNAJC5BQ9UF47 199 aa15.56■□□□□ 0.08
ATP2C1-216ENST00000509150 C1QBPQ07021 282 aaKnown RBP15.45■□□□□ 0.06
ATP2C1-216ENST00000509150 SLC4A2P04920 1241 aa15.33■□□□□ 0.04
ATP2C1-216ENST00000509150 U3KPZ7 1027 aaPredicted RBP15.33■□□□□ 0.04
ATP2C1-216ENST00000509150 SLC4A1APQ9BWU0 796 aaKnown RBP15.17■□□□□ 0.02
ATP2C1-216ENST00000509150 SPINK5Q9NQ38 1064 aaPredicted RBP15.09■□□□□ 0.01
ATP2C1-216ENST00000509150 CAPN15O75808 1086 aa15.02■□□□□ -0
ATP2C1-216ENST00000509150 TRHP20396 242 aaPredicted RBP14.87□□□□□ -0.03
ATP2C1-216ENST00000509150 MYCNP04198 464 aaPredicted RBP14.85□□□□□ -0.03
ATP2C1-216ENST00000509150 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.84□□□□□ -0.03
ATP2C1-216ENST00000509150 HNRNPUL2Q1KMD3 747 aaKnown RBP14.84□□□□□ -0.03
ATP2C1-216ENST00000509150 DSG3P32926 999 aa14.83□□□□□ -0.04
ATP2C1-216ENST00000509150 FOXD4L1Q9NU39 408 aa14.83□□□□□ -0.04
ATP2C1-216ENST00000509150 ZBTB22O15209 634 aa14.8□□□□□ -0.04
ATP2C1-216ENST00000509150 SAMD1Q6SPF0 538 aaPredicted RBP14.8□□□□□ -0.04
ATP2C1-216ENST00000509150 APLP2Q06481 763 aa14.78□□□□□ -0.04
ATP2C1-216ENST00000509150 ABCB7O75027 752 aa14.77□□□□□ -0.05
ATP2C1-216ENST00000509150 ZNF219Q9P2Y4 722 aaPredicted RBP14.72□□□□□ -0.05
ATP2C1-216ENST00000509150 ATF5Q9Y2D1 282 aaPredicted RBP14.61□□□□□ -0.07
ATP2C1-216ENST00000509150 POTEHQ6S545 545 aa14.5□□□□□ -0.09
ATP2C1-216ENST00000509150 POLA2Q14181 598 aa14.48□□□□□ -0.09
ATP2C1-216ENST00000509150 EHMT2Q96KQ7 1210 aa14.34□□□□□ -0.11
ATP2C1-216ENST00000509150 CSRNP3Q8WYN3 585 aa14.28□□□□□ -0.12
ATP2C1-216ENST00000509150 ATXN8OSP0DMR3 200 aa14.25□□□□□ -0.13
ATP2C1-216ENST00000509150 ZBTB12Q9Y330 459 aaPredicted RBP14.08□□□□□ -0.16
ATP2C1-216ENST00000509150 OSCARQ8IYS5 282 aa14.06□□□□□ -0.16
ATP2C1-216ENST00000509150 RBM42Q9BTD8 480 aaKnown RBP14.06□□□□□ -0.16
ATP2C1-216ENST00000509150 MKRN4PQ13434 485 aaPredicted RBP13.91□□□□□ -0.18
ATP2C1-216ENST00000509150 FBLN2P98095 1184 aa13.9□□□□□ -0.18
ATP2C1-216ENST00000509150 AKT1S1Q96B36 256 aa13.81□□□□□ -0.2
ATP2C1-216ENST00000509150 CHRDL2Q6WN34 429 aa13.74□□□□□ -0.21
ATP2C1-216ENST00000509150 REM2Q8IYK8 340 aaPredicted RBP13.74□□□□□ -0.21
ATP2C1-216ENST00000509150 SPDYE2BA6NHP3 402 aa13.69□□□□□ -0.22
ATP2C1-216ENST00000509150 SPDYE6P0CI01 402 aa13.69□□□□□ -0.22
ATP2C1-216ENST00000509150 SPDYE2Q495Y8 402 aa13.69□□□□□ -0.22
ATP2C1-216ENST00000509150 ZNF692Q9BU19 519 aaPredicted RBP13.64□□□□□ -0.23
ATP2C1-216ENST00000509150 PITPNM1O00562 1244 aa13.63□□□□□ -0.23
ATP2C1-216ENST00000509150 SSUH2Q9Y2M2 353 aa13.57□□□□□ -0.24
ATP2C1-216ENST00000509150 CLEC11AQ9Y240 323 aa13.5□□□□□ -0.25
ATP2C1-216ENST00000509150 PIP4P2Q8N4L2 257 aa13.49□□□□□ -0.25
ATP2C1-216ENST00000509150 PABPN1Q86U42 306 aaKnown RBP eCLIP13.47□□□□□ -0.25
ATP2C1-216ENST00000509150 SPDYE1Q8NFV5 336 aaPredicted RBP13.42□□□□□ -0.26
ATP2C1-216ENST00000509150 FXR2P51116 673 aaKnown RBP eCLIP13.39□□□□□ -0.27
ATP2C1-216ENST00000509150 SPDYE4A6NLX3 237 aa13.34□□□□□ -0.27
ATP2C1-216ENST00000509150 PRKAR2AP13861 404 aaKnown RBP13.28□□□□□ -0.28
ATP2C1-216ENST00000509150 CHADLQ6NUI6 762 aa13.25□□□□□ -0.29
ATP2C1-216ENST00000509150 PRR29P0C7W0 189 aa13.24□□□□□ -0.29
ATP2C1-216ENST00000509150 SP7Q8TDD2 431 aaPredicted RBP13.2□□□□□ -0.3
ATP2C1-216ENST00000509150 HAX1O00165 279 aa13.19□□□□□ -0.3
ATP2C1-216ENST00000509150 EVX2Q03828 476 aa13.1□□□□□ -0.31
ATP2C1-216ENST00000509150 STAG3Q9UJ98 1225 aa13.02□□□□□ -0.33
ATP2C1-216ENST00000509150 CREBZFQ9NS37 354 aa12.99□□□□□ -0.33
ATP2C1-216ENST00000509150 FKBP8Q14318 412 aa12.98□□□□□ -0.33
ATP2C1-216ENST00000509150 PROM2Q8N271 834 aa12.98□□□□□ -0.33
ATP2C1-216ENST00000509150 FARP1Q9Y4F1 1045 aaPredicted RBP12.97□□□□□ -0.33
ATP2C1-216ENST00000509150 C19orf67A6NJJ6 358 aa12.96□□□□□ -0.33
ATP2C1-216ENST00000509150 CD44P16070 742 aaKnown RBP12.87□□□□□ -0.35
ATP2C1-216ENST00000509150 MNX1P50219 401 aaPredicted RBP12.78□□□□□ -0.36
ATP2C1-216ENST00000509150 GABBR2O75899 941 aa12.75□□□□□ -0.37
ATP2C1-216ENST00000509150 ZRANB1Q9UGI0 708 aa12.74□□□□□ -0.37
ATP2C1-216ENST00000509150 MIER1Q8N108 512 aa12.71□□□□□ -0.37
ATP2C1-216ENST00000509150 NPM1P06748 294 aaKnown RBP eCLIP12.68□□□□□ -0.38
ATP2C1-216ENST00000509150 PLCD3Q8N3E9 789 aa12.64□□□□□ -0.39
ATP2C1-216ENST00000509150 PAK3O75914 559 aaPredicted RBP12.62□□□□□ -0.39
ATP2C1-216ENST00000509150 ZNF579Q8NAF0 562 aaKnown RBP12.62□□□□□ -0.39
ATP2C1-216ENST00000509150 PHF12Q96QT6 1004 aa12.62□□□□□ -0.39
ATP2C1-216ENST00000509150 PLEKHG5O94827 1062 aa12.6□□□□□ -0.39
ATP2C1-216ENST00000509150 TSPYL2Q9H2G4 693 aaPredicted RBP12.59□□□□□ -0.39
ATP2C1-216ENST00000509150 GALR2O43603 387 aaPredicted RBP12.54□□□□□ -0.4
ATP2C1-216ENST00000509150 RASEFQ8IZ41 740 aa12.52□□□□□ -0.41
ATP2C1-216ENST00000509150 POTEIP0CG38 1075 aa12.51□□□□□ -0.41
ATP2C1-216ENST00000509150 FBXO3Q9UK99 471 aa12.5□□□□□ -0.41
ATP2C1-216ENST00000509150 DCBLD2Q96PD2 775 aa12.45□□□□□ -0.42
ATP2C1-216ENST00000509150 CCDC61Q9Y6R9 512 aa12.45□□□□□ -0.42
ATP2C1-216ENST00000509150 VASPP50552 380 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms