RNA–Protein interactions for RNA: ENST00000509099.1

SLIT2-207, Transcript of slit guidance ligand 2, humanhuman

TSL 4

Gene SLIT2, Length 443 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT2-207ENST00000509099 AEBP2Q6ZN18 517 aaPredicted RBP30.19■■■□□ 2.42
SLIT2-207ENST00000509099 CHIC1Q5VXU3 224 aa28.18■■■□□ 2.1
SLIT2-207ENST00000509099 SENP3Q9H4L4 574 aaPredicted RBP25.62■■□□□ 1.69
SLIT2-207ENST00000509099 PHF23Q9BUL5 403 aaPredicted RBP25.32■■□□□ 1.64
SLIT2-207ENST00000509099 FOXD1Q16676 465 aa24.06■■□□□ 1.44
SLIT2-207ENST00000509099 POTEDQ86YR6 584 aa22.78■■□□□ 1.24
SLIT2-207ENST00000509099 MSH5O43196 834 aa22.52■■□□□ 1.2
SLIT2-207ENST00000509099 PIAS4Q8N2W9 510 aaPredicted RBP22.31■■□□□ 1.16
SLIT2-207ENST00000509099 PPP6R1Q9UPN7 881 aa22.26■■□□□ 1.15
SLIT2-207ENST00000509099 PLPPR3Q6T4P5 718 aa22.25■■□□□ 1.15
SLIT2-207ENST00000509099 ADRA2BP18089 450 aa22.12■■□□□ 1.13
SLIT2-207ENST00000509099 MAPK8IP2Q13387 824 aaPredicted RBP20.47■□□□□ 0.87
SLIT2-207ENST00000509099 DMRT2Q9Y5R5 561 aa20.31■□□□□ 0.84
SLIT2-207ENST00000509099 SCAF1Q9H7N4 1312 aaKnown RBP20.02■□□□□ 0.8
SLIT2-207ENST00000509099 CACNB1Q02641 598 aaPredicted RBP19.6■□□□□ 0.73
SLIT2-207ENST00000509099 PPP4R3CPQ6ZMV5 832 aa19.52■□□□□ 0.72
SLIT2-207ENST00000509099 DCAF8L1A6NGE4 600 aa19.47■□□□□ 0.71
SLIT2-207ENST00000509099 HOXD11P31277 338 aaPredicted RBP19.41■□□□□ 0.7
SLIT2-207ENST00000509099 RNF39Q9H2S5 420 aa19.26■□□□□ 0.67
SLIT2-207ENST00000509099 CNKSR2Q8WXI2 1034 aa19.19■□□□□ 0.66
SLIT2-207ENST00000509099 RNF216Q9NWF9 866 aaPredicted RBP19.13■□□□□ 0.65
SLIT2-207ENST00000509099 C1QBPQ07021 282 aaKnown RBP18.88■□□□□ 0.61
SLIT2-207ENST00000509099 DNAJC5BQ9UF47 199 aa18.72■□□□□ 0.59
SLIT2-207ENST00000509099 NCBP3Q53F19 620 aaKnown RBP18.53■□□□□ 0.56
SLIT2-207ENST00000509099 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.44■□□□□ 0.54
SLIT2-207ENST00000509099 NPM3O75607 178 aaKnown RBP18.41■□□□□ 0.54
SLIT2-207ENST00000509099 U3KPZ7 1027 aaPredicted RBP18.1■□□□□ 0.49
SLIT2-207ENST00000509099 SPINK5Q9NQ38 1064 aaPredicted RBP17.99■□□□□ 0.47
SLIT2-207ENST00000509099 DSG3P32926 999 aa17.92■□□□□ 0.46
SLIT2-207ENST00000509099 CAPN15O75808 1086 aa17.88■□□□□ 0.45
SLIT2-207ENST00000509099 SLC4A2P04920 1241 aa17.74■□□□□ 0.43
SLIT2-207ENST00000509099 KCNA4P22459 653 aa17.74■□□□□ 0.43
SLIT2-207ENST00000509099 POTEHQ6S545 545 aa17.73■□□□□ 0.43
SLIT2-207ENST00000509099 TRHP20396 242 aaPredicted RBP17.51■□□□□ 0.39
SLIT2-207ENST00000509099 ABCB7O75027 752 aa17.5■□□□□ 0.39
SLIT2-207ENST00000509099 ZNF219Q9P2Y4 722 aaPredicted RBP17.39■□□□□ 0.37
SLIT2-207ENST00000509099 APLP2Q06481 763 aa17.32■□□□□ 0.36
SLIT2-207ENST00000509099 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.25■□□□□ 0.35
SLIT2-207ENST00000509099 HNRNPUL2Q1KMD3 747 aaKnown RBP17.25■□□□□ 0.35
SLIT2-207ENST00000509099 SAMD1Q6SPF0 538 aaPredicted RBP17.19■□□□□ 0.34
SLIT2-207ENST00000509099 POLA2Q14181 598 aa16.96■□□□□ 0.31
SLIT2-207ENST00000509099 RBM42Q9BTD8 480 aaKnown RBP16.96■□□□□ 0.31
SLIT2-207ENST00000509099 MYCNP04198 464 aaPredicted RBP16.95■□□□□ 0.3
SLIT2-207ENST00000509099 CHRDL2Q6WN34 429 aa16.85■□□□□ 0.29
SLIT2-207ENST00000509099 ATF5Q9Y2D1 282 aaPredicted RBP16.76■□□□□ 0.27
SLIT2-207ENST00000509099 SLC4A1APQ9BWU0 796 aaKnown RBP16.59■□□□□ 0.25
SLIT2-207ENST00000509099 FOXD4L1Q9NU39 408 aa16.59■□□□□ 0.25
SLIT2-207ENST00000509099 AKT1S1Q96B36 256 aa16.55■□□□□ 0.24
SLIT2-207ENST00000509099 OSCARQ8IYS5 282 aa16.47■□□□□ 0.23
SLIT2-207ENST00000509099 REM2Q8IYK8 340 aaPredicted RBP16.46■□□□□ 0.23
SLIT2-207ENST00000509099 ZBTB12Q9Y330 459 aaPredicted RBP16.45■□□□□ 0.22
SLIT2-207ENST00000509099 SP7Q8TDD2 431 aaPredicted RBP16.42■□□□□ 0.22
SLIT2-207ENST00000509099 PIP4P2Q8N4L2 257 aa16.41■□□□□ 0.22
SLIT2-207ENST00000509099 ZBTB22O15209 634 aa16.38■□□□□ 0.21
SLIT2-207ENST00000509099 PITPNM1O00562 1244 aa16.31■□□□□ 0.2
SLIT2-207ENST00000509099 FXR2P51116 673 aaKnown RBP eCLIP16.23■□□□□ 0.19
SLIT2-207ENST00000509099 HAX1O00165 279 aa16.15■□□□□ 0.18
SLIT2-207ENST00000509099 EVX2Q03828 476 aa16.08■□□□□ 0.16
SLIT2-207ENST00000509099 ATXN8OSP0DMR3 200 aa16.06■□□□□ 0.16
SLIT2-207ENST00000509099 SPDYE2BA6NHP3 402 aa15.98■□□□□ 0.15
SLIT2-207ENST00000509099 SPDYE6P0CI01 402 aa15.98■□□□□ 0.15
SLIT2-207ENST00000509099 SPDYE2Q495Y8 402 aa15.98■□□□□ 0.15
SLIT2-207ENST00000509099 MKRN4PQ13434 485 aaPredicted RBP15.95■□□□□ 0.14
SLIT2-207ENST00000509099 FBLN2P98095 1184 aa15.92■□□□□ 0.14
SLIT2-207ENST00000509099 PRKAR2AP13861 404 aaKnown RBP15.85■□□□□ 0.13
SLIT2-207ENST00000509099 CLEC11AQ9Y240 323 aa15.83■□□□□ 0.12
SLIT2-207ENST00000509099 SSUH2Q9Y2M2 353 aa15.79■□□□□ 0.12
SLIT2-207ENST00000509099 SPDYE1Q8NFV5 336 aaPredicted RBP15.78■□□□□ 0.12
SLIT2-207ENST00000509099 ZNF692Q9BU19 519 aaPredicted RBP15.75■□□□□ 0.11
SLIT2-207ENST00000509099 C19orf67A6NJJ6 358 aa15.73■□□□□ 0.11
SLIT2-207ENST00000509099 CHADLQ6NUI6 762 aa15.65■□□□□ 0.1
SLIT2-207ENST00000509099 GABBR2O75899 941 aa15.6■□□□□ 0.09
SLIT2-207ENST00000509099 PABPN1Q86U42 306 aaKnown RBP eCLIP15.54■□□□□ 0.08
SLIT2-207ENST00000509099 PRR29P0C7W0 189 aa15.48■□□□□ 0.07
SLIT2-207ENST00000509099 LHX8Q68G74 356 aa15.4■□□□□ 0.06
SLIT2-207ENST00000509099 POTEIP0CG38 1075 aa15.35■□□□□ 0.05
SLIT2-207ENST00000509099 FARP1Q9Y4F1 1045 aaPredicted RBP15.32■□□□□ 0.04
SLIT2-207ENST00000509099 CD44P16070 742 aaKnown RBP15.31■□□□□ 0.04
SLIT2-207ENST00000509099 CSRNP3Q8WYN3 585 aa15.21■□□□□ 0.03
SLIT2-207ENST00000509099 CREBZFQ9NS37 354 aa15.1■□□□□ 0.01
SLIT2-207ENST00000509099 ZNF579Q8NAF0 562 aaKnown RBP15.06■□□□□ 0
SLIT2-207ENST00000509099 ZRANB1Q9UGI0 708 aa15.04■□□□□ -0
SLIT2-207ENST00000509099 CLCN6P51797 869 aa15.03■□□□□ -0
SLIT2-207ENST00000509099 DCBLD2Q96PD2 775 aa15□□□□□ -0.01
SLIT2-207ENST00000509099 GALR2O43603 387 aaPredicted RBP14.97□□□□□ -0.01
SLIT2-207ENST00000509099 STAG3Q9UJ98 1225 aa14.91□□□□□ -0.02
SLIT2-207ENST00000509099 SPDYE4A6NLX3 237 aa14.89□□□□□ -0.03
SLIT2-207ENST00000509099 PHF12Q96QT6 1004 aa14.87□□□□□ -0.03
SLIT2-207ENST00000509099 POTEB2H3BUK9 544 aa14.85□□□□□ -0.03
SLIT2-207ENST00000509099 MNX1P50219 401 aaPredicted RBP14.82□□□□□ -0.04
SLIT2-207ENST00000509099 OTUD5Q96G74 571 aa14.81□□□□□ -0.04
SLIT2-207ENST00000509099 PELP1Q8IZL8 1130 aaKnown RBP14.76□□□□□ -0.05
SLIT2-207ENST00000509099 EHMT2Q96KQ7 1210 aa14.76□□□□□ -0.05
SLIT2-207ENST00000509099 PLSCR2Q9NRY7 297 aa14.72□□□□□ -0.05
SLIT2-207ENST00000509099 PAK3O75914 559 aaPredicted RBP14.71□□□□□ -0.05
SLIT2-207ENST00000509099 NPM1P06748 294 aaKnown RBP eCLIP14.66□□□□□ -0.06
SLIT2-207ENST00000509099 MS4A3Q96HJ5 214 aa14.63□□□□□ -0.07
SLIT2-207ENST00000509099 POTEJP0CG39 1038 aa14.59□□□□□ -0.07
SLIT2-207ENST00000509099 ASTLQ6HA08 431 aaPredicted RBP14.58□□□□□ -0.08
SLIT2-207ENST00000509099 ATMINO43313 823 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms