RNA–Protein interactions for RNA: ENST00000508837.1

SPDL1-208, Transcript of spindle apparatus coiled-coil protein 1, humanhuman

TSL 3

Gene SPDL1, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1-208ENST00000508837 AEBP2Q6ZN18 517 aaPredicted RBP24.76■■□□□ 1.55
SPDL1-208ENST00000508837 CHIC1Q5VXU3 224 aa23.36■■□□□ 1.33
SPDL1-208ENST00000508837 SENP3Q9H4L4 574 aaPredicted RBP21.16■□□□□ 0.98
SPDL1-208ENST00000508837 PHF23Q9BUL5 403 aaPredicted RBP20.79■□□□□ 0.92
SPDL1-208ENST00000508837 FOXD1Q16676 465 aa19.86■□□□□ 0.77
SPDL1-208ENST00000508837 POTEDQ86YR6 584 aa19.74■□□□□ 0.75
SPDL1-208ENST00000508837 MSH5O43196 834 aa18.84■□□□□ 0.61
SPDL1-208ENST00000508837 PLPPR3Q6T4P5 718 aa18.67■□□□□ 0.58
SPDL1-208ENST00000508837 PIAS4Q8N2W9 510 aaPredicted RBP18.28■□□□□ 0.52
SPDL1-208ENST00000508837 PPP6R1Q9UPN7 881 aa18.28■□□□□ 0.52
SPDL1-208ENST00000508837 ADRA2BP18089 450 aa18.21■□□□□ 0.51
SPDL1-208ENST00000508837 MAPK8IP2Q13387 824 aaPredicted RBP16.72■□□□□ 0.27
SPDL1-208ENST00000508837 DMRT2Q9Y5R5 561 aa16.71■□□□□ 0.27
SPDL1-208ENST00000508837 SCAF1Q9H7N4 1312 aaKnown RBP16.64■□□□□ 0.25
SPDL1-208ENST00000508837 CACNB1Q02641 598 aaPredicted RBP16.57■□□□□ 0.24
SPDL1-208ENST00000508837 PPP4R3CPQ6ZMV5 832 aa16.37■□□□□ 0.21
SPDL1-208ENST00000508837 CNKSR2Q8WXI2 1034 aa16.06■□□□□ 0.16
SPDL1-208ENST00000508837 RNF39Q9H2S5 420 aa16.06■□□□□ 0.16
SPDL1-208ENST00000508837 HOXD11P31277 338 aaPredicted RBP16.02■□□□□ 0.16
SPDL1-208ENST00000508837 RNF216Q9NWF9 866 aaPredicted RBP15.91■□□□□ 0.14
SPDL1-208ENST00000508837 DCAF8L1A6NGE4 600 aa15.87■□□□□ 0.13
SPDL1-208ENST00000508837 C1QBPQ07021 282 aaKnown RBP15.75■□□□□ 0.11
SPDL1-208ENST00000508837 NCBP3Q53F19 620 aaKnown RBP15.74■□□□□ 0.11
SPDL1-208ENST00000508837 NPM3O75607 178 aaKnown RBP15.53■□□□□ 0.08
SPDL1-208ENST00000508837 DNAJC5BQ9UF47 199 aa15.48■□□□□ 0.07
SPDL1-208ENST00000508837 POTEHQ6S545 545 aa15.29■□□□□ 0.04
SPDL1-208ENST00000508837 KCNA4P22459 653 aa15.28■□□□□ 0.04
SPDL1-208ENST00000508837 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.23■□□□□ 0.03
SPDL1-208ENST00000508837 U3KPZ7 1027 aaPredicted RBP14.95□□□□□ -0.02
SPDL1-208ENST00000508837 SLC4A2P04920 1241 aa14.84□□□□□ -0.03
SPDL1-208ENST00000508837 DSG3P32926 999 aa14.76□□□□□ -0.05
SPDL1-208ENST00000508837 SPINK5Q9NQ38 1064 aaPredicted RBP14.71□□□□□ -0.05
SPDL1-208ENST00000508837 CAPN15O75808 1086 aa14.65□□□□□ -0.06
SPDL1-208ENST00000508837 APLP2Q06481 763 aa14.57□□□□□ -0.08
SPDL1-208ENST00000508837 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.52□□□□□ -0.09
SPDL1-208ENST00000508837 HNRNPUL2Q1KMD3 747 aaKnown RBP14.52□□□□□ -0.09
SPDL1-208ENST00000508837 SAMD1Q6SPF0 538 aaPredicted RBP14.44□□□□□ -0.1
SPDL1-208ENST00000508837 TRHP20396 242 aaPredicted RBP14.43□□□□□ -0.1
SPDL1-208ENST00000508837 ZNF219Q9P2Y4 722 aaPredicted RBP14.42□□□□□ -0.1
SPDL1-208ENST00000508837 SLC4A1APQ9BWU0 796 aaKnown RBP14.41□□□□□ -0.1
SPDL1-208ENST00000508837 MYCNP04198 464 aaPredicted RBP14.35□□□□□ -0.11
SPDL1-208ENST00000508837 ABCB7O75027 752 aa14.32□□□□□ -0.12
SPDL1-208ENST00000508837 FOXD4L1Q9NU39 408 aa14.24□□□□□ -0.13
SPDL1-208ENST00000508837 ZBTB22O15209 634 aa14.06□□□□□ -0.16
SPDL1-208ENST00000508837 POLA2Q14181 598 aa14.06□□□□□ -0.16
SPDL1-208ENST00000508837 CHRDL2Q6WN34 429 aa14.06□□□□□ -0.16
SPDL1-208ENST00000508837 ATF5Q9Y2D1 282 aaPredicted RBP14.04□□□□□ -0.16
SPDL1-208ENST00000508837 RBM42Q9BTD8 480 aaKnown RBP14.03□□□□□ -0.16
SPDL1-208ENST00000508837 SP7Q8TDD2 431 aaPredicted RBP13.97□□□□□ -0.17
SPDL1-208ENST00000508837 ZBTB12Q9Y330 459 aaPredicted RBP13.82□□□□□ -0.2
SPDL1-208ENST00000508837 ATXN8OSP0DMR3 200 aa13.81□□□□□ -0.2
SPDL1-208ENST00000508837 OSCARQ8IYS5 282 aa13.62□□□□□ -0.23
SPDL1-208ENST00000508837 AKT1S1Q96B36 256 aa13.61□□□□□ -0.23
SPDL1-208ENST00000508837 PIP4P2Q8N4L2 257 aa13.59□□□□□ -0.23
SPDL1-208ENST00000508837 REM2Q8IYK8 340 aaPredicted RBP13.48□□□□□ -0.25
SPDL1-208ENST00000508837 HAX1O00165 279 aa13.45□□□□□ -0.26
SPDL1-208ENST00000508837 FBLN2P98095 1184 aa13.45□□□□□ -0.26
SPDL1-208ENST00000508837 CSRNP3Q8WYN3 585 aa13.45□□□□□ -0.26
SPDL1-208ENST00000508837 FXR2P51116 673 aaKnown RBP eCLIP13.41□□□□□ -0.26
SPDL1-208ENST00000508837 MKRN4PQ13434 485 aaPredicted RBP13.4□□□□□ -0.26
SPDL1-208ENST00000508837 SPDYE2BA6NHP3 402 aa13.37□□□□□ -0.27
SPDL1-208ENST00000508837 SPDYE6P0CI01 402 aa13.37□□□□□ -0.27
SPDL1-208ENST00000508837 SPDYE2Q495Y8 402 aa13.37□□□□□ -0.27
SPDL1-208ENST00000508837 EVX2Q03828 476 aa13.35□□□□□ -0.27
SPDL1-208ENST00000508837 PITPNM1O00562 1244 aa13.33□□□□□ -0.28
SPDL1-208ENST00000508837 EHMT2Q96KQ7 1210 aa13.25□□□□□ -0.29
SPDL1-208ENST00000508837 SSUH2Q9Y2M2 353 aa13.22□□□□□ -0.29
SPDL1-208ENST00000508837 ZNF692Q9BU19 519 aaPredicted RBP13.21□□□□□ -0.29
SPDL1-208ENST00000508837 SPDYE1Q8NFV5 336 aaPredicted RBP13.12□□□□□ -0.31
SPDL1-208ENST00000508837 LHX8Q68G74 356 aa13.07□□□□□ -0.32
SPDL1-208ENST00000508837 CLEC11AQ9Y240 323 aa13.07□□□□□ -0.32
SPDL1-208ENST00000508837 PABPN1Q86U42 306 aaKnown RBP eCLIP13.02□□□□□ -0.33
SPDL1-208ENST00000508837 C19orf67A6NJJ6 358 aa13.01□□□□□ -0.33
SPDL1-208ENST00000508837 GABBR2O75899 941 aa12.97□□□□□ -0.33
SPDL1-208ENST00000508837 PRKAR2AP13861 404 aaKnown RBP12.97□□□□□ -0.33
SPDL1-208ENST00000508837 PRR29P0C7W0 189 aa12.88□□□□□ -0.35
SPDL1-208ENST00000508837 CHADLQ6NUI6 762 aa12.84□□□□□ -0.35
SPDL1-208ENST00000508837 SPDYE4A6NLX3 237 aa12.77□□□□□ -0.37
SPDL1-208ENST00000508837 PLSCR2Q9NRY7 297 aa12.77□□□□□ -0.37
SPDL1-208ENST00000508837 POTEIP0CG38 1075 aa12.75□□□□□ -0.37
SPDL1-208ENST00000508837 STAG3Q9UJ98 1225 aa12.67□□□□□ -0.38
SPDL1-208ENST00000508837 FARP1Q9Y4F1 1045 aaPredicted RBP12.67□□□□□ -0.38
SPDL1-208ENST00000508837 CREBZFQ9NS37 354 aa12.6□□□□□ -0.39
SPDL1-208ENST00000508837 CD44P16070 742 aaKnown RBP12.56□□□□□ -0.4
SPDL1-208ENST00000508837 CLCN6P51797 869 aa12.51□□□□□ -0.41
SPDL1-208ENST00000508837 PROM2Q8N271 834 aa12.5□□□□□ -0.41
SPDL1-208ENST00000508837 MNX1P50219 401 aaPredicted RBP12.4□□□□□ -0.42
SPDL1-208ENST00000508837 OTUD5Q96G74 571 aa12.4□□□□□ -0.42
SPDL1-208ENST00000508837 ZNF579Q8NAF0 562 aaKnown RBP12.39□□□□□ -0.43
SPDL1-208ENST00000508837 ZRANB1Q9UGI0 708 aa12.39□□□□□ -0.43
SPDL1-208ENST00000508837 DCBLD2Q96PD2 775 aa12.35□□□□□ -0.43
SPDL1-208ENST00000508837 NPM1P06748 294 aaKnown RBP eCLIP12.34□□□□□ -0.43
SPDL1-208ENST00000508837 POTEMA6NI47 508 aa12.33□□□□□ -0.44
SPDL1-208ENST00000508837 PAK3O75914 559 aaPredicted RBP12.31□□□□□ -0.44
SPDL1-208ENST00000508837 POTEB2H3BUK9 544 aa12.3□□□□□ -0.44
SPDL1-208ENST00000508837 POTEGQ6S5H5 508 aa12.28□□□□□ -0.44
SPDL1-208ENST00000508837 GALR2O43603 387 aaPredicted RBP12.23□□□□□ -0.45
SPDL1-208ENST00000508837 PHF12Q96QT6 1004 aa12.23□□□□□ -0.45
SPDL1-208ENST00000508837 PCDH10Q9P2E7 1040 aa12.22□□□□□ -0.45
SPDL1-208ENST00000508837 FKBP8Q14318 412 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms