RNA–Protein interactions for RNA: ENST00000508523.5

GRAMD2B-208, Transcript of GRAM domain containing 2B, humanhuman

TSL 3

Gene GRAMD2B, Length 679 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-208ENST00000508523 AEBP2Q6ZN18 517 aaPredicted RBP30.45■■■□□ 2.47
GRAMD2B-208ENST00000508523 CHIC1Q5VXU3 224 aa29.11■■■□□ 2.25
GRAMD2B-208ENST00000508523 SENP3Q9H4L4 574 aaPredicted RBP25.81■■□□□ 1.72
GRAMD2B-208ENST00000508523 PHF23Q9BUL5 403 aaPredicted RBP25.6■■□□□ 1.69
GRAMD2B-208ENST00000508523 FOXD1Q16676 465 aa24.1■■□□□ 1.45
GRAMD2B-208ENST00000508523 PLPPR3Q6T4P5 718 aa23.32■■□□□ 1.32
GRAMD2B-208ENST00000508523 PPP6R1Q9UPN7 881 aa22.77■■□□□ 1.24
GRAMD2B-208ENST00000508523 ADRA2BP18089 450 aa22.66■■□□□ 1.22
GRAMD2B-208ENST00000508523 PIAS4Q8N2W9 510 aaPredicted RBP22.51■■□□□ 1.19
GRAMD2B-208ENST00000508523 MSH5O43196 834 aa22.37■■□□□ 1.17
GRAMD2B-208ENST00000508523 POTEDQ86YR6 584 aa21.46■■□□□ 1.03
GRAMD2B-208ENST00000508523 MAPK8IP2Q13387 824 aaPredicted RBP20.74■□□□□ 0.91
GRAMD2B-208ENST00000508523 SCAF1Q9H7N4 1312 aaKnown RBP20.61■□□□□ 0.89
GRAMD2B-208ENST00000508523 DMRT2Q9Y5R5 561 aa20.56■□□□□ 0.88
GRAMD2B-208ENST00000508523 PPP4R3CPQ6ZMV5 832 aa20.5■□□□□ 0.87
GRAMD2B-208ENST00000508523 CNKSR2Q8WXI2 1034 aa20.04■□□□□ 0.8
GRAMD2B-208ENST00000508523 HOXD11P31277 338 aaPredicted RBP19.93■□□□□ 0.78
GRAMD2B-208ENST00000508523 RNF216Q9NWF9 866 aaPredicted RBP19.81■□□□□ 0.76
GRAMD2B-208ENST00000508523 NCBP3Q53F19 620 aaKnown RBP19.7■□□□□ 0.74
GRAMD2B-208ENST00000508523 DCAF8L1A6NGE4 600 aa19.55■□□□□ 0.72
GRAMD2B-208ENST00000508523 NPM3O75607 178 aaKnown RBP19.53■□□□□ 0.72
GRAMD2B-208ENST00000508523 KCNA4P22459 653 aa19.39■□□□□ 0.69
GRAMD2B-208ENST00000508523 DNAJC5BQ9UF47 199 aa19.19■□□□□ 0.66
GRAMD2B-208ENST00000508523 RNF39Q9H2S5 420 aa19.18■□□□□ 0.66
GRAMD2B-208ENST00000508523 CACNB1Q02641 598 aaPredicted RBP19■□□□□ 0.63
GRAMD2B-208ENST00000508523 C1QBPQ07021 282 aaKnown RBP18.86■□□□□ 0.61
GRAMD2B-208ENST00000508523 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.86■□□□□ 0.61
GRAMD2B-208ENST00000508523 SLC4A2P04920 1241 aa18.63■□□□□ 0.57
GRAMD2B-208ENST00000508523 U3KPZ7 1027 aaPredicted RBP18.61■□□□□ 0.57
GRAMD2B-208ENST00000508523 SLC4A1APQ9BWU0 796 aaKnown RBP18.29■□□□□ 0.52
GRAMD2B-208ENST00000508523 SPINK5Q9NQ38 1064 aaPredicted RBP18.25■□□□□ 0.51
GRAMD2B-208ENST00000508523 CAPN15O75808 1086 aa18.11■□□□□ 0.49
GRAMD2B-208ENST00000508523 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.05■□□□□ 0.48
GRAMD2B-208ENST00000508523 DSG3P32926 999 aa18.05■□□□□ 0.48
GRAMD2B-208ENST00000508523 HNRNPUL2Q1KMD3 747 aaKnown RBP18.05■□□□□ 0.48
GRAMD2B-208ENST00000508523 MYCNP04198 464 aaPredicted RBP18.01■□□□□ 0.47
GRAMD2B-208ENST00000508523 SAMD1Q6SPF0 538 aaPredicted RBP17.99■□□□□ 0.47
GRAMD2B-208ENST00000508523 FOXD4L1Q9NU39 408 aa17.98■□□□□ 0.47
GRAMD2B-208ENST00000508523 APLP2Q06481 763 aa17.97■□□□□ 0.47
GRAMD2B-208ENST00000508523 ZBTB22O15209 634 aa17.9■□□□□ 0.46
GRAMD2B-208ENST00000508523 TRHP20396 242 aaPredicted RBP17.88■□□□□ 0.45
GRAMD2B-208ENST00000508523 ZNF219Q9P2Y4 722 aaPredicted RBP17.88■□□□□ 0.45
GRAMD2B-208ENST00000508523 ABCB7O75027 752 aa17.75■□□□□ 0.43
GRAMD2B-208ENST00000508523 ATF5Q9Y2D1 282 aaPredicted RBP17.66■□□□□ 0.42
GRAMD2B-208ENST00000508523 POLA2Q14181 598 aa17.51■□□□□ 0.39
GRAMD2B-208ENST00000508523 ATXN8OSP0DMR3 200 aa17.4■□□□□ 0.38
GRAMD2B-208ENST00000508523 CSRNP3Q8WYN3 585 aa17.27■□□□□ 0.36
GRAMD2B-208ENST00000508523 ZBTB12Q9Y330 459 aaPredicted RBP17.12■□□□□ 0.33
GRAMD2B-208ENST00000508523 RBM42Q9BTD8 480 aaKnown RBP17.11■□□□□ 0.33
GRAMD2B-208ENST00000508523 EHMT2Q96KQ7 1210 aa17.08■□□□□ 0.32
GRAMD2B-208ENST00000508523 OSCARQ8IYS5 282 aa16.96■□□□□ 0.31
GRAMD2B-208ENST00000508523 MKRN4PQ13434 485 aaPredicted RBP16.87■□□□□ 0.29
GRAMD2B-208ENST00000508523 POTEHQ6S545 545 aa16.83■□□□□ 0.28
GRAMD2B-208ENST00000508523 AKT1S1Q96B36 256 aa16.82■□□□□ 0.28
GRAMD2B-208ENST00000508523 FBLN2P98095 1184 aa16.8■□□□□ 0.28
GRAMD2B-208ENST00000508523 CHRDL2Q6WN34 429 aa16.68■□□□□ 0.26
GRAMD2B-208ENST00000508523 REM2Q8IYK8 340 aaPredicted RBP16.68■□□□□ 0.26
GRAMD2B-208ENST00000508523 SPDYE2BA6NHP3 402 aa16.66■□□□□ 0.26
GRAMD2B-208ENST00000508523 SPDYE6P0CI01 402 aa16.66■□□□□ 0.26
GRAMD2B-208ENST00000508523 SPDYE2Q495Y8 402 aa16.66■□□□□ 0.26
GRAMD2B-208ENST00000508523 SSUH2Q9Y2M2 353 aa16.54■□□□□ 0.24
GRAMD2B-208ENST00000508523 PITPNM1O00562 1244 aa16.51■□□□□ 0.23
GRAMD2B-208ENST00000508523 ZNF692Q9BU19 519 aaPredicted RBP16.47■□□□□ 0.23
GRAMD2B-208ENST00000508523 PIP4P2Q8N4L2 257 aa16.37■□□□□ 0.21
GRAMD2B-208ENST00000508523 FXR2P51116 673 aaKnown RBP eCLIP16.34■□□□□ 0.21
GRAMD2B-208ENST00000508523 SPDYE1Q8NFV5 336 aaPredicted RBP16.28■□□□□ 0.2
GRAMD2B-208ENST00000508523 PABPN1Q86U42 306 aaKnown RBP eCLIP16.27■□□□□ 0.2
GRAMD2B-208ENST00000508523 CLEC11AQ9Y240 323 aa16.21■□□□□ 0.19
GRAMD2B-208ENST00000508523 SPDYE4A6NLX3 237 aa16.1■□□□□ 0.17
GRAMD2B-208ENST00000508523 PRKAR2AP13861 404 aaKnown RBP16.05■□□□□ 0.16
GRAMD2B-208ENST00000508523 PRR29P0C7W0 189 aa15.99■□□□□ 0.15
GRAMD2B-208ENST00000508523 CHADLQ6NUI6 762 aa15.95■□□□□ 0.14
GRAMD2B-208ENST00000508523 HAX1O00165 279 aa15.91■□□□□ 0.14
GRAMD2B-208ENST00000508523 SP7Q8TDD2 431 aaPredicted RBP15.9■□□□□ 0.14
GRAMD2B-208ENST00000508523 EVX2Q03828 476 aa15.88■□□□□ 0.13
GRAMD2B-208ENST00000508523 PROM2Q8N271 834 aa15.88■□□□□ 0.13
GRAMD2B-208ENST00000508523 STAG3Q9UJ98 1225 aa15.83■□□□□ 0.12
GRAMD2B-208ENST00000508523 C19orf67A6NJJ6 358 aa15.8■□□□□ 0.12
GRAMD2B-208ENST00000508523 CREBZFQ9NS37 354 aa15.76■□□□□ 0.11
GRAMD2B-208ENST00000508523 FARP1Q9Y4F1 1045 aaPredicted RBP15.73■□□□□ 0.11
GRAMD2B-208ENST00000508523 MNX1P50219 401 aaPredicted RBP15.57■□□□□ 0.08
GRAMD2B-208ENST00000508523 FKBP8Q14318 412 aa15.57■□□□□ 0.08
GRAMD2B-208ENST00000508523 CD44P16070 742 aaKnown RBP15.55■□□□□ 0.08
GRAMD2B-208ENST00000508523 GABBR2O75899 941 aa15.48■□□□□ 0.07
GRAMD2B-208ENST00000508523 ZNF579Q8NAF0 562 aaKnown RBP15.37■□□□□ 0.05
GRAMD2B-208ENST00000508523 NPM1P06748 294 aaKnown RBP eCLIP15.36■□□□□ 0.05
GRAMD2B-208ENST00000508523 ZRANB1Q9UGI0 708 aa15.36■□□□□ 0.05
GRAMD2B-208ENST00000508523 MIER1Q8N108 512 aa15.28■□□□□ 0.04
GRAMD2B-208ENST00000508523 CLCN6P51797 869 aa15.27■□□□□ 0.04
GRAMD2B-208ENST00000508523 POTEIP0CG38 1075 aa15.22■□□□□ 0.03
GRAMD2B-208ENST00000508523 PAK3O75914 559 aaPredicted RBP15.21■□□□□ 0.03
GRAMD2B-208ENST00000508523 PHF12Q96QT6 1004 aa15.21■□□□□ 0.03
GRAMD2B-208ENST00000508523 PLEKHG5O94827 1062 aa15.17■□□□□ 0.02
GRAMD2B-208ENST00000508523 PLCD3Q8N3E9 789 aa15.17■□□□□ 0.02
GRAMD2B-208ENST00000508523 GALR2O43603 387 aaPredicted RBP15.16■□□□□ 0.02
GRAMD2B-208ENST00000508523 RASEFQ8IZ41 740 aa15.13■□□□□ 0.01
GRAMD2B-208ENST00000508523 TSPYL2Q9H2G4 693 aaPredicted RBP15.12■□□□□ 0.01
GRAMD2B-208ENST00000508523 FBXO3Q9UK99 471 aa15.12■□□□□ 0.01
GRAMD2B-208ENST00000508523 CCDC61Q9Y6R9 512 aa15.12■□□□□ 0.01
GRAMD2B-208ENST00000508523 NUBP1P53384 320 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms