RNA–Protein interactions for RNA: ENST00000508437.1

LINC00604-201, long intergenic non-protein coding RNA 604, humanhuman

TSL 2

Gene LINC00604, Length 499 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00604-201ENST00000508437 AEBP2Q6ZN18 517 aaPredicted RBP18.44■□□□□ 0.54
LINC00604-201ENST00000508437 CHIC1Q5VXU3 224 aa17.81■□□□□ 0.44
LINC00604-201ENST00000508437 PHF23Q9BUL5 403 aaPredicted RBP15.66■□□□□ 0.1
LINC00604-201ENST00000508437 SENP3Q9H4L4 574 aaPredicted RBP15.64■□□□□ 0.09
LINC00604-201ENST00000508437 FOXD1Q16676 465 aa14.55□□□□□ -0.08
LINC00604-201ENST00000508437 PLPPR3Q6T4P5 718 aa14.38□□□□□ -0.11
LINC00604-201ENST00000508437 PPP6R1Q9UPN7 881 aa13.88□□□□□ -0.19
LINC00604-201ENST00000508437 ADRA2BP18089 450 aa13.87□□□□□ -0.19
LINC00604-201ENST00000508437 PIAS4Q8N2W9 510 aaPredicted RBP13.7□□□□□ -0.22
LINC00604-201ENST00000508437 MSH5O43196 834 aa13.46□□□□□ -0.25
LINC00604-201ENST00000508437 PPP4R3CPQ6ZMV5 832 aa12.67□□□□□ -0.38
LINC00604-201ENST00000508437 MAPK8IP2Q13387 824 aaPredicted RBP12.64□□□□□ -0.39
LINC00604-201ENST00000508437 SCAF1Q9H7N4 1312 aaKnown RBP12.63□□□□□ -0.39
LINC00604-201ENST00000508437 POTEDQ86YR6 584 aa12.57□□□□□ -0.4
LINC00604-201ENST00000508437 DMRT2Q9Y5R5 561 aa12.45□□□□□ -0.42
LINC00604-201ENST00000508437 CNKSR2Q8WXI2 1034 aa12.33□□□□□ -0.44
LINC00604-201ENST00000508437 NCBP3Q53F19 620 aaKnown RBP12.26□□□□□ -0.45
LINC00604-201ENST00000508437 KCNA4P22459 653 aa12.21□□□□□ -0.45
LINC00604-201ENST00000508437 RNF216Q9NWF9 866 aaPredicted RBP12.13□□□□□ -0.47
LINC00604-201ENST00000508437 HOXD11P31277 338 aaPredicted RBP12.12□□□□□ -0.47
LINC00604-201ENST00000508437 NPM3O75607 178 aaKnown RBP12.11□□□□□ -0.47
LINC00604-201ENST00000508437 DCAF8L1A6NGE4 600 aa11.98□□□□□ -0.49
LINC00604-201ENST00000508437 DNAJC5BQ9UF47 199 aa11.71□□□□□ -0.53
LINC00604-201ENST00000508437 SLC4A1APQ9BWU0 796 aaKnown RBP11.59□□□□□ -0.55
LINC00604-201ENST00000508437 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.58□□□□□ -0.56
LINC00604-201ENST00000508437 RNF39Q9H2S5 420 aa11.53□□□□□ -0.56
LINC00604-201ENST00000508437 SLC4A2P04920 1241 aa11.48□□□□□ -0.57
LINC00604-201ENST00000508437 U3KPZ7 1027 aaPredicted RBP11.39□□□□□ -0.59
LINC00604-201ENST00000508437 CACNB1Q02641 598 aaPredicted RBP11.37□□□□□ -0.59
LINC00604-201ENST00000508437 C1QBPQ07021 282 aaKnown RBP11.35□□□□□ -0.59
LINC00604-201ENST00000508437 FOXD4L1Q9NU39 408 aa11.26□□□□□ -0.61
LINC00604-201ENST00000508437 ZBTB22O15209 634 aa11.24□□□□□ -0.61
LINC00604-201ENST00000508437 MYCNP04198 464 aaPredicted RBP11.19□□□□□ -0.62
LINC00604-201ENST00000508437 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.13□□□□□ -0.63
LINC00604-201ENST00000508437 HNRNPUL2Q1KMD3 747 aaKnown RBP11.13□□□□□ -0.63
LINC00604-201ENST00000508437 SPINK5Q9NQ38 1064 aaPredicted RBP11.13□□□□□ -0.63
LINC00604-201ENST00000508437 EHMT2Q96KQ7 1210 aa11.11□□□□□ -0.63
LINC00604-201ENST00000508437 SAMD1Q6SPF0 538 aaPredicted RBP11.1□□□□□ -0.63
LINC00604-201ENST00000508437 CAPN15O75808 1086 aa11.09□□□□□ -0.63
LINC00604-201ENST00000508437 APLP2Q06481 763 aa11.05□□□□□ -0.64
LINC00604-201ENST00000508437 CSRNP3Q8WYN3 585 aa11.01□□□□□ -0.65
LINC00604-201ENST00000508437 TRHP20396 242 aaPredicted RBP11□□□□□ -0.65
LINC00604-201ENST00000508437 ZNF219Q9P2Y4 722 aaPredicted RBP10.96□□□□□ -0.65
LINC00604-201ENST00000508437 ATF5Q9Y2D1 282 aaPredicted RBP10.93□□□□□ -0.66
LINC00604-201ENST00000508437 DSG3P32926 999 aa10.92□□□□□ -0.66
LINC00604-201ENST00000508437 ABCB7O75027 752 aa10.88□□□□□ -0.67
LINC00604-201ENST00000508437 ATXN8OSP0DMR3 200 aa10.84□□□□□ -0.67
LINC00604-201ENST00000508437 POLA2Q14181 598 aa10.76□□□□□ -0.69
LINC00604-201ENST00000508437 ZBTB12Q9Y330 459 aaPredicted RBP10.54□□□□□ -0.72
LINC00604-201ENST00000508437 FBLN2P98095 1184 aa10.45□□□□□ -0.74
LINC00604-201ENST00000508437 MKRN4PQ13434 485 aaPredicted RBP10.44□□□□□ -0.74
LINC00604-201ENST00000508437 OSCARQ8IYS5 282 aa10.43□□□□□ -0.74
LINC00604-201ENST00000508437 RBM42Q9BTD8 480 aaKnown RBP10.39□□□□□ -0.75
LINC00604-201ENST00000508437 SPDYE2BA6NHP3 402 aa10.25□□□□□ -0.77
LINC00604-201ENST00000508437 SPDYE6P0CI01 402 aa10.25□□□□□ -0.77
LINC00604-201ENST00000508437 SPDYE2Q495Y8 402 aa10.25□□□□□ -0.77
LINC00604-201ENST00000508437 AKT1S1Q96B36 256 aa10.22□□□□□ -0.77
LINC00604-201ENST00000508437 ZNF692Q9BU19 519 aaPredicted RBP10.2□□□□□ -0.78
LINC00604-201ENST00000508437 SSUH2Q9Y2M2 353 aa10.16□□□□□ -0.78
LINC00604-201ENST00000508437 REM2Q8IYK8 340 aaPredicted RBP10.15□□□□□ -0.78
LINC00604-201ENST00000508437 SPDYE4A6NLX3 237 aa10.11□□□□□ -0.79
LINC00604-201ENST00000508437 PABPN1Q86U42 306 aaKnown RBP eCLIP10.08□□□□□ -0.8
LINC00604-201ENST00000508437 PITPNM1O00562 1244 aa10.05□□□□□ -0.8
LINC00604-201ENST00000508437 CHRDL2Q6WN34 429 aa10.05□□□□□ -0.8
LINC00604-201ENST00000508437 FKBP8Q14318 412 aa9.99□□□□□ -0.81
LINC00604-201ENST00000508437 SPDYE1Q8NFV5 336 aaPredicted RBP9.99□□□□□ -0.81
LINC00604-201ENST00000508437 CLEC11AQ9Y240 323 aa9.99□□□□□ -0.81
LINC00604-201ENST00000508437 POTEHQ6S545 545 aa9.92□□□□□ -0.82
LINC00604-201ENST00000508437 PROM2Q8N271 834 aa9.89□□□□□ -0.83
LINC00604-201ENST00000508437 PIP4P2Q8N4L2 257 aa9.88□□□□□ -0.83
LINC00604-201ENST00000508437 FXR2P51116 673 aaKnown RBP eCLIP9.86□□□□□ -0.83
LINC00604-201ENST00000508437 PRR29P0C7W0 189 aa9.85□□□□□ -0.83
LINC00604-201ENST00000508437 STAG3Q9UJ98 1225 aa9.83□□□□□ -0.84
LINC00604-201ENST00000508437 PRKAR2AP13861 404 aaKnown RBP9.79□□□□□ -0.84
LINC00604-201ENST00000508437 CHADLQ6NUI6 762 aa9.78□□□□□ -0.84
LINC00604-201ENST00000508437 CREBZFQ9NS37 354 aa9.7□□□□□ -0.86
LINC00604-201ENST00000508437 FARP1Q9Y4F1 1045 aaPredicted RBP9.64□□□□□ -0.87
LINC00604-201ENST00000508437 HAX1O00165 279 aa9.62□□□□□ -0.87
LINC00604-201ENST00000508437 FBXO3Q9UK99 471 aa9.62□□□□□ -0.87
LINC00604-201ENST00000508437 MIER1Q8N108 512 aa9.6□□□□□ -0.87
LINC00604-201ENST00000508437 PLCD3Q8N3E9 789 aa9.58□□□□□ -0.88
LINC00604-201ENST00000508437 MNX1P50219 401 aaPredicted RBP9.57□□□□□ -0.88
LINC00604-201ENST00000508437 C19orf67A6NJJ6 358 aa9.54□□□□□ -0.88
LINC00604-201ENST00000508437 PLEKHG5O94827 1062 aa9.54□□□□□ -0.88
LINC00604-201ENST00000508437 VASPP50552 380 aaPredicted RBP9.54□□□□□ -0.88
LINC00604-201ENST00000508437 EVX2Q03828 476 aa9.53□□□□□ -0.88
LINC00604-201ENST00000508437 NPM1P06748 294 aaKnown RBP eCLIP9.51□□□□□ -0.89
LINC00604-201ENST00000508437 CD44P16070 742 aaKnown RBP9.51□□□□□ -0.89
LINC00604-201ENST00000508437 SP7Q8TDD2 431 aaPredicted RBP9.45□□□□□ -0.9
LINC00604-201ENST00000508437 ZBTB47Q9UFB7 747 aaPredicted RBP9.44□□□□□ -0.9
LINC00604-201ENST00000508437 KLHL34Q8N239 644 aa9.42□□□□□ -0.9
LINC00604-201ENST00000508437 ZRANB1Q9UGI0 708 aa9.42□□□□□ -0.9
LINC00604-201ENST00000508437 RASEFQ8IZ41 740 aa9.41□□□□□ -0.9
LINC00604-201ENST00000508437 PAK3O75914 559 aaPredicted RBP9.4□□□□□ -0.9
LINC00604-201ENST00000508437 IFNLR1Q8IU57 520 aaPredicted RBP9.39□□□□□ -0.91
LINC00604-201ENST00000508437 TSPYL2Q9H2G4 693 aaPredicted RBP9.39□□□□□ -0.91
LINC00604-201ENST00000508437 NUBP1P53384 320 aa9.37□□□□□ -0.91
LINC00604-201ENST00000508437 ZNF579Q8NAF0 562 aaKnown RBP9.36□□□□□ -0.91
LINC00604-201ENST00000508437 PHF12Q96QT6 1004 aa9.35□□□□□ -0.91
LINC00604-201ENST00000508437 GABBR2O75899 941 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms