RNA–Protein interactions for RNA: ENST00000508058.1

ZCCHC4-205, Transcript of zinc finger CCHC-type containing 4, humanhuman

TSL 4

Gene ZCCHC4, Length 527 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC4-205ENST00000508058 AEBP2Q6ZN18 517 aaPredicted RBP22.42■■□□□ 1.18
ZCCHC4-205ENST00000508058 CHIC1Q5VXU3 224 aa21.14■□□□□ 0.97
ZCCHC4-205ENST00000508058 SENP3Q9H4L4 574 aaPredicted RBP19.14■□□□□ 0.65
ZCCHC4-205ENST00000508058 PHF23Q9BUL5 403 aaPredicted RBP18.87■□□□□ 0.61
ZCCHC4-205ENST00000508058 FOXD1Q16676 465 aa17.86■□□□□ 0.45
ZCCHC4-205ENST00000508058 PLPPR3Q6T4P5 718 aa16.81■□□□□ 0.28
ZCCHC4-205ENST00000508058 MSH5O43196 834 aa16.76■□□□□ 0.27
ZCCHC4-205ENST00000508058 PIAS4Q8N2W9 510 aaPredicted RBP16.65■□□□□ 0.26
ZCCHC4-205ENST00000508058 POTEDQ86YR6 584 aa16.63■□□□□ 0.25
ZCCHC4-205ENST00000508058 PPP6R1Q9UPN7 881 aa16.59■□□□□ 0.25
ZCCHC4-205ENST00000508058 ADRA2BP18089 450 aa16.52■□□□□ 0.24
ZCCHC4-205ENST00000508058 MAPK8IP2Q13387 824 aaPredicted RBP15.22■□□□□ 0.03
ZCCHC4-205ENST00000508058 DMRT2Q9Y5R5 561 aa15.16■□□□□ 0.02
ZCCHC4-205ENST00000508058 SCAF1Q9H7N4 1312 aaKnown RBP15.1■□□□□ 0.01
ZCCHC4-205ENST00000508058 PPP4R3CPQ6ZMV5 832 aa14.72□□□□□ -0.05
ZCCHC4-205ENST00000508058 HOXD11P31277 338 aaPredicted RBP14.54□□□□□ -0.08
ZCCHC4-205ENST00000508058 DCAF8L1A6NGE4 600 aa14.53□□□□□ -0.08
ZCCHC4-205ENST00000508058 CACNB1Q02641 598 aaPredicted RBP14.48□□□□□ -0.09
ZCCHC4-205ENST00000508058 CNKSR2Q8WXI2 1034 aa14.48□□□□□ -0.09
ZCCHC4-205ENST00000508058 RNF216Q9NWF9 866 aaPredicted RBP14.38□□□□□ -0.11
ZCCHC4-205ENST00000508058 RNF39Q9H2S5 420 aa14.29□□□□□ -0.12
ZCCHC4-205ENST00000508058 KCNA4P22459 653 aa14.15□□□□□ -0.14
ZCCHC4-205ENST00000508058 NCBP3Q53F19 620 aaKnown RBP14.09□□□□□ -0.15
ZCCHC4-205ENST00000508058 C1QBPQ07021 282 aaKnown RBP14.07□□□□□ -0.16
ZCCHC4-205ENST00000508058 DNAJC5BQ9UF47 199 aa14.06□□□□□ -0.16
ZCCHC4-205ENST00000508058 NPM3O75607 178 aaKnown RBP13.97□□□□□ -0.17
ZCCHC4-205ENST00000508058 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.84□□□□□ -0.19
ZCCHC4-205ENST00000508058 U3KPZ7 1027 aaPredicted RBP13.55□□□□□ -0.24
ZCCHC4-205ENST00000508058 SPINK5Q9NQ38 1064 aaPredicted RBP13.4□□□□□ -0.26
ZCCHC4-205ENST00000508058 CAPN15O75808 1086 aa13.37□□□□□ -0.27
ZCCHC4-205ENST00000508058 SLC4A1APQ9BWU0 796 aaKnown RBP13.37□□□□□ -0.27
ZCCHC4-205ENST00000508058 DSG3P32926 999 aa13.34□□□□□ -0.27
ZCCHC4-205ENST00000508058 SLC4A2P04920 1241 aa13.33□□□□□ -0.28
ZCCHC4-205ENST00000508058 APLP2Q06481 763 aa13.13□□□□□ -0.31
ZCCHC4-205ENST00000508058 TRHP20396 242 aaPredicted RBP13.12□□□□□ -0.31
ZCCHC4-205ENST00000508058 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.09□□□□□ -0.31
ZCCHC4-205ENST00000508058 HNRNPUL2Q1KMD3 747 aaKnown RBP13.09□□□□□ -0.31
ZCCHC4-205ENST00000508058 ZNF219Q9P2Y4 722 aaPredicted RBP13.09□□□□□ -0.31
ZCCHC4-205ENST00000508058 ZBTB22O15209 634 aa13.07□□□□□ -0.32
ZCCHC4-205ENST00000508058 ABCB7O75027 752 aa13.06□□□□□ -0.32
ZCCHC4-205ENST00000508058 SAMD1Q6SPF0 538 aaPredicted RBP13.01□□□□□ -0.33
ZCCHC4-205ENST00000508058 POTEHQ6S545 545 aa13□□□□□ -0.33
ZCCHC4-205ENST00000508058 FOXD4L1Q9NU39 408 aa12.97□□□□□ -0.33
ZCCHC4-205ENST00000508058 EHMT2Q96KQ7 1210 aa12.88□□□□□ -0.35
ZCCHC4-205ENST00000508058 MYCNP04198 464 aaPredicted RBP12.87□□□□□ -0.35
ZCCHC4-205ENST00000508058 CSRNP3Q8WYN3 585 aa12.83□□□□□ -0.36
ZCCHC4-205ENST00000508058 POLA2Q14181 598 aa12.74□□□□□ -0.37
ZCCHC4-205ENST00000508058 RBM42Q9BTD8 480 aaKnown RBP12.72□□□□□ -0.37
ZCCHC4-205ENST00000508058 ATF5Q9Y2D1 282 aaPredicted RBP12.65□□□□□ -0.38
ZCCHC4-205ENST00000508058 CHRDL2Q6WN34 429 aa12.51□□□□□ -0.41
ZCCHC4-205ENST00000508058 ATXN8OSP0DMR3 200 aa12.49□□□□□ -0.41
ZCCHC4-205ENST00000508058 ZBTB12Q9Y330 459 aaPredicted RBP12.46□□□□□ -0.41
ZCCHC4-205ENST00000508058 AKT1S1Q96B36 256 aa12.4□□□□□ -0.42
ZCCHC4-205ENST00000508058 OSCARQ8IYS5 282 aa12.35□□□□□ -0.43
ZCCHC4-205ENST00000508058 REM2Q8IYK8 340 aaPredicted RBP12.29□□□□□ -0.44
ZCCHC4-205ENST00000508058 PIP4P2Q8N4L2 257 aa12.18□□□□□ -0.46
ZCCHC4-205ENST00000508058 PITPNM1O00562 1244 aa12.16□□□□□ -0.46
ZCCHC4-205ENST00000508058 SP7Q8TDD2 431 aaPredicted RBP12.12□□□□□ -0.47
ZCCHC4-205ENST00000508058 FBLN2P98095 1184 aa12.09□□□□□ -0.47
ZCCHC4-205ENST00000508058 FXR2P51116 673 aaKnown RBP eCLIP12.08□□□□□ -0.48
ZCCHC4-205ENST00000508058 MKRN4PQ13434 485 aaPredicted RBP12.08□□□□□ -0.48
ZCCHC4-205ENST00000508058 SPDYE2BA6NHP3 402 aa12.07□□□□□ -0.48
ZCCHC4-205ENST00000508058 SPDYE6P0CI01 402 aa12.07□□□□□ -0.48
ZCCHC4-205ENST00000508058 SPDYE2Q495Y8 402 aa12.07□□□□□ -0.48
ZCCHC4-205ENST00000508058 HAX1O00165 279 aa11.99□□□□□ -0.49
ZCCHC4-205ENST00000508058 ZNF692Q9BU19 519 aaPredicted RBP11.9□□□□□ -0.5
ZCCHC4-205ENST00000508058 SSUH2Q9Y2M2 353 aa11.9□□□□□ -0.5
ZCCHC4-205ENST00000508058 SPDYE1Q8NFV5 336 aaPredicted RBP11.89□□□□□ -0.51
ZCCHC4-205ENST00000508058 CLEC11AQ9Y240 323 aa11.89□□□□□ -0.51
ZCCHC4-205ENST00000508058 PRKAR2AP13861 404 aaKnown RBP11.85□□□□□ -0.51
ZCCHC4-205ENST00000508058 EVX2Q03828 476 aa11.85□□□□□ -0.51
ZCCHC4-205ENST00000508058 PABPN1Q86U42 306 aaKnown RBP eCLIP11.73□□□□□ -0.53
ZCCHC4-205ENST00000508058 C19orf67A6NJJ6 358 aa11.7□□□□□ -0.54
ZCCHC4-205ENST00000508058 CHADLQ6NUI6 762 aa11.68□□□□□ -0.54
ZCCHC4-205ENST00000508058 PRR29P0C7W0 189 aa11.66□□□□□ -0.54
ZCCHC4-205ENST00000508058 SPDYE4A6NLX3 237 aa11.65□□□□□ -0.54
ZCCHC4-205ENST00000508058 GABBR2O75899 941 aa11.57□□□□□ -0.56
ZCCHC4-205ENST00000508058 FKBP8Q14318 412 aa11.55□□□□□ -0.56
ZCCHC4-205ENST00000508058 PROM2Q8N271 834 aa11.48□□□□□ -0.57
ZCCHC4-205ENST00000508058 FARP1Q9Y4F1 1045 aaPredicted RBP11.48□□□□□ -0.57
ZCCHC4-205ENST00000508058 CD44P16070 742 aaKnown RBP11.46□□□□□ -0.57
ZCCHC4-205ENST00000508058 LHX8Q68G74 356 aa11.36□□□□□ -0.59
ZCCHC4-205ENST00000508058 STAG3Q9UJ98 1225 aa11.36□□□□□ -0.59
ZCCHC4-205ENST00000508058 CREBZFQ9NS37 354 aa11.35□□□□□ -0.59
ZCCHC4-205ENST00000508058 POTEIP0CG38 1075 aa11.33□□□□□ -0.6
ZCCHC4-205ENST00000508058 CLCN6P51797 869 aa11.32□□□□□ -0.6
ZCCHC4-205ENST00000508058 ZNF579Q8NAF0 562 aaKnown RBP11.28□□□□□ -0.6
ZCCHC4-205ENST00000508058 ZRANB1Q9UGI0 708 aa11.27□□□□□ -0.61
ZCCHC4-205ENST00000508058 DCBLD2Q96PD2 775 aa11.22□□□□□ -0.61
ZCCHC4-205ENST00000508058 GALR2O43603 387 aaPredicted RBP11.16□□□□□ -0.62
ZCCHC4-205ENST00000508058 PAK3O75914 559 aaPredicted RBP11.14□□□□□ -0.63
ZCCHC4-205ENST00000508058 MNX1P50219 401 aaPredicted RBP11.13□□□□□ -0.63
ZCCHC4-205ENST00000508058 NPM1P06748 294 aaKnown RBP eCLIP11.12□□□□□ -0.63
ZCCHC4-205ENST00000508058 PHF12Q96QT6 1004 aa11.11□□□□□ -0.63
ZCCHC4-205ENST00000508058 FBXO3Q9UK99 471 aa11.08□□□□□ -0.64
ZCCHC4-205ENST00000508058 MIER1Q8N108 512 aa11.04□□□□□ -0.64
ZCCHC4-205ENST00000508058 VASPP50552 380 aaPredicted RBP11.02□□□□□ -0.65
ZCCHC4-205ENST00000508058 PLCD3Q8N3E9 789 aa10.99□□□□□ -0.65
ZCCHC4-205ENST00000508058 POTEB2H3BUK9 544 aa10.96□□□□□ -0.65
ZCCHC4-205ENST00000508058 MS4A3Q96HJ5 214 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms