RNA–Protein interactions for RNA: ENST00000507977.1

RAB3C-203, Transcript of RAB3C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB3C, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-203ENST00000507977 AEBP2Q6ZN18 517 aaPredicted RBP28.79■■■□□ 2.2
RAB3C-203ENST00000507977 CHIC1Q5VXU3 224 aa27.06■■□□□ 1.92
RAB3C-203ENST00000507977 SENP3Q9H4L4 574 aaPredicted RBP24.52■■□□□ 1.52
RAB3C-203ENST00000507977 PHF23Q9BUL5 403 aaPredicted RBP24.19■■□□□ 1.46
RAB3C-203ENST00000507977 FOXD1Q16676 465 aa22.93■■□□□ 1.26
RAB3C-203ENST00000507977 MSH5O43196 834 aa21.49■■□□□ 1.03
RAB3C-203ENST00000507977 PLPPR3Q6T4P5 718 aa21.48■■□□□ 1.03
RAB3C-203ENST00000507977 POTEDQ86YR6 584 aa21.43■■□□□ 1.02
RAB3C-203ENST00000507977 PIAS4Q8N2W9 510 aaPredicted RBP21.33■■□□□ 1.01
RAB3C-203ENST00000507977 PPP6R1Q9UPN7 881 aa21.28■■□□□ 1
RAB3C-203ENST00000507977 ADRA2BP18089 450 aa21.17■□□□□ 0.98
RAB3C-203ENST00000507977 MAPK8IP2Q13387 824 aaPredicted RBP19.53■□□□□ 0.72
RAB3C-203ENST00000507977 DMRT2Q9Y5R5 561 aa19.44■□□□□ 0.7
RAB3C-203ENST00000507977 SCAF1Q9H7N4 1312 aaKnown RBP19.28■□□□□ 0.68
RAB3C-203ENST00000507977 PPP4R3CPQ6ZMV5 832 aa18.81■□□□□ 0.6
RAB3C-203ENST00000507977 HOXD11P31277 338 aaPredicted RBP18.63■□□□□ 0.57
RAB3C-203ENST00000507977 DCAF8L1A6NGE4 600 aa18.58■□□□□ 0.56
RAB3C-203ENST00000507977 CACNB1Q02641 598 aaPredicted RBP18.58■□□□□ 0.56
RAB3C-203ENST00000507977 CNKSR2Q8WXI2 1034 aa18.5■□□□□ 0.55
RAB3C-203ENST00000507977 RNF216Q9NWF9 866 aaPredicted RBP18.4■□□□□ 0.54
RAB3C-203ENST00000507977 RNF39Q9H2S5 420 aa18.36■□□□□ 0.53
RAB3C-203ENST00000507977 C1QBPQ07021 282 aaKnown RBP18.05■□□□□ 0.48
RAB3C-203ENST00000507977 DNAJC5BQ9UF47 199 aa18.02■□□□□ 0.48
RAB3C-203ENST00000507977 NCBP3Q53F19 620 aaKnown RBP17.96■□□□□ 0.47
RAB3C-203ENST00000507977 NPM3O75607 178 aaKnown RBP17.79■□□□□ 0.44
RAB3C-203ENST00000507977 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.7■□□□□ 0.42
RAB3C-203ENST00000507977 U3KPZ7 1027 aaPredicted RBP17.37■□□□□ 0.37
RAB3C-203ENST00000507977 KCNA4P22459 653 aa17.24■□□□□ 0.35
RAB3C-203ENST00000507977 SPINK5Q9NQ38 1064 aaPredicted RBP17.18■□□□□ 0.34
RAB3C-203ENST00000507977 DSG3P32926 999 aa17.11■□□□□ 0.33
RAB3C-203ENST00000507977 CAPN15O75808 1086 aa17.1■□□□□ 0.33
RAB3C-203ENST00000507977 SLC4A2P04920 1241 aa17.08■□□□□ 0.32
RAB3C-203ENST00000507977 TRHP20396 242 aaPredicted RBP16.78■□□□□ 0.28
RAB3C-203ENST00000507977 APLP2Q06481 763 aa16.73■□□□□ 0.27
RAB3C-203ENST00000507977 POTEHQ6S545 545 aa16.73■□□□□ 0.27
RAB3C-203ENST00000507977 ZNF219Q9P2Y4 722 aaPredicted RBP16.73■□□□□ 0.27
RAB3C-203ENST00000507977 ABCB7O75027 752 aa16.72■□□□□ 0.27
RAB3C-203ENST00000507977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.7■□□□□ 0.26
RAB3C-203ENST00000507977 HNRNPUL2Q1KMD3 747 aaKnown RBP16.7■□□□□ 0.26
RAB3C-203ENST00000507977 SAMD1Q6SPF0 538 aaPredicted RBP16.62■□□□□ 0.25
RAB3C-203ENST00000507977 MYCNP04198 464 aaPredicted RBP16.41■□□□□ 0.22
RAB3C-203ENST00000507977 POLA2Q14181 598 aa16.29■□□□□ 0.2
RAB3C-203ENST00000507977 RBM42Q9BTD8 480 aaKnown RBP16.27■□□□□ 0.2
RAB3C-203ENST00000507977 SLC4A1APQ9BWU0 796 aaKnown RBP16.18■□□□□ 0.18
RAB3C-203ENST00000507977 FOXD4L1Q9NU39 408 aa16.13■□□□□ 0.17
RAB3C-203ENST00000507977 ATF5Q9Y2D1 282 aaPredicted RBP16.12■□□□□ 0.17
RAB3C-203ENST00000507977 CHRDL2Q6WN34 429 aa16.06■□□□□ 0.16
RAB3C-203ENST00000507977 ZBTB12Q9Y330 459 aaPredicted RBP15.9■□□□□ 0.14
RAB3C-203ENST00000507977 ZBTB22O15209 634 aa15.89■□□□□ 0.13
RAB3C-203ENST00000507977 AKT1S1Q96B36 256 aa15.87■□□□□ 0.13
RAB3C-203ENST00000507977 OSCARQ8IYS5 282 aa15.8■□□□□ 0.12
RAB3C-203ENST00000507977 REM2Q8IYK8 340 aaPredicted RBP15.75■□□□□ 0.11
RAB3C-203ENST00000507977 ATXN8OSP0DMR3 200 aa15.64■□□□□ 0.09
RAB3C-203ENST00000507977 PIP4P2Q8N4L2 257 aa15.63■□□□□ 0.09
RAB3C-203ENST00000507977 PITPNM1O00562 1244 aa15.59■□□□□ 0.09
RAB3C-203ENST00000507977 SP7Q8TDD2 431 aaPredicted RBP15.56■□□□□ 0.08
RAB3C-203ENST00000507977 FXR2P51116 673 aaKnown RBP eCLIP15.5■□□□□ 0.07
RAB3C-203ENST00000507977 SPDYE2BA6NHP3 402 aa15.42■□□□□ 0.06
RAB3C-203ENST00000507977 SPDYE6P0CI01 402 aa15.42■□□□□ 0.06
RAB3C-203ENST00000507977 SPDYE2Q495Y8 402 aa15.42■□□□□ 0.06
RAB3C-203ENST00000507977 FBLN2P98095 1184 aa15.4■□□□□ 0.06
RAB3C-203ENST00000507977 MKRN4PQ13434 485 aaPredicted RBP15.37■□□□□ 0.05
RAB3C-203ENST00000507977 HAX1O00165 279 aa15.36■□□□□ 0.05
RAB3C-203ENST00000507977 EVX2Q03828 476 aa15.25■□□□□ 0.03
RAB3C-203ENST00000507977 SSUH2Q9Y2M2 353 aa15.23■□□□□ 0.03
RAB3C-203ENST00000507977 SPDYE1Q8NFV5 336 aaPredicted RBP15.2■□□□□ 0.02
RAB3C-203ENST00000507977 ZNF692Q9BU19 519 aaPredicted RBP15.18■□□□□ 0.02
RAB3C-203ENST00000507977 CLEC11AQ9Y240 323 aa15.17■□□□□ 0.02
RAB3C-203ENST00000507977 PRKAR2AP13861 404 aaKnown RBP15.16■□□□□ 0.02
RAB3C-203ENST00000507977 C19orf67A6NJJ6 358 aa15.01□□□□□ -0.01
RAB3C-203ENST00000507977 PABPN1Q86U42 306 aaKnown RBP eCLIP14.97□□□□□ -0.01
RAB3C-203ENST00000507977 CHADLQ6NUI6 762 aa14.96□□□□□ -0.01
RAB3C-203ENST00000507977 CSRNP3Q8WYN3 585 aa14.91□□□□□ -0.02
RAB3C-203ENST00000507977 PRR29P0C7W0 189 aa14.88□□□□□ -0.03
RAB3C-203ENST00000507977 GABBR2O75899 941 aa14.84□□□□□ -0.03
RAB3C-203ENST00000507977 FARP1Q9Y4F1 1045 aaPredicted RBP14.7□□□□□ -0.06
RAB3C-203ENST00000507977 CD44P16070 742 aaKnown RBP14.66□□□□□ -0.06
RAB3C-203ENST00000507977 LHX8Q68G74 356 aa14.58□□□□□ -0.08
RAB3C-203ENST00000507977 POTEIP0CG38 1075 aa14.57□□□□□ -0.08
RAB3C-203ENST00000507977 EHMT2Q96KQ7 1210 aa14.54□□□□□ -0.08
RAB3C-203ENST00000507977 CREBZFQ9NS37 354 aa14.52□□□□□ -0.09
RAB3C-203ENST00000507977 CLCN6P51797 869 aa14.47□□□□□ -0.09
RAB3C-203ENST00000507977 SPDYE4A6NLX3 237 aa14.46□□□□□ -0.09
RAB3C-203ENST00000507977 STAG3Q9UJ98 1225 aa14.46□□□□□ -0.09
RAB3C-203ENST00000507977 ZNF579Q8NAF0 562 aaKnown RBP14.44□□□□□ -0.1
RAB3C-203ENST00000507977 ZRANB1Q9UGI0 708 aa14.41□□□□□ -0.1
RAB3C-203ENST00000507977 DCBLD2Q96PD2 775 aa14.34□□□□□ -0.11
RAB3C-203ENST00000507977 GALR2O43603 387 aaPredicted RBP14.3□□□□□ -0.12
RAB3C-203ENST00000507977 MNX1P50219 401 aaPredicted RBP14.28□□□□□ -0.12
RAB3C-203ENST00000507977 PHF12Q96QT6 1004 aa14.22□□□□□ -0.13
RAB3C-203ENST00000507977 PAK3O75914 559 aaPredicted RBP14.19□□□□□ -0.14
RAB3C-203ENST00000507977 NPM1P06748 294 aaKnown RBP eCLIP14.17□□□□□ -0.14
RAB3C-203ENST00000507977 PROM2Q8N271 834 aa14.13□□□□□ -0.15
RAB3C-203ENST00000507977 POTEB2H3BUK9 544 aa14.09□□□□□ -0.15
RAB3C-203ENST00000507977 PELP1Q8IZL8 1130 aaKnown RBP14.07□□□□□ -0.16
RAB3C-203ENST00000507977 OTUD5Q96G74 571 aa14.06□□□□□ -0.16
RAB3C-203ENST00000507977 MS4A3Q96HJ5 214 aa14.03□□□□□ -0.16
RAB3C-203ENST00000507977 ASTLQ6HA08 431 aaPredicted RBP13.97□□□□□ -0.17
RAB3C-203ENST00000507977 ATMINO43313 823 aaPredicted RBP13.94□□□□□ -0.18
RAB3C-203ENST00000507977 TSPYL2Q9H2G4 693 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 447.3 ms