RNA–Protein interactions for RNA: ENST00000507815.1

DDX60-203, Transcript of DExD/H-box helicase 60, humanhuman

TSL 2

Gene DDX60, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-203ENST00000507815 AEBP2Q6ZN18 517 aaPredicted RBP27.56■■■□□ 2
DDX60-203ENST00000507815 CHIC1Q5VXU3 224 aa25.88■■□□□ 1.73
DDX60-203ENST00000507815 SENP3Q9H4L4 574 aaPredicted RBP23.58■■□□□ 1.37
DDX60-203ENST00000507815 PHF23Q9BUL5 403 aaPredicted RBP23.23■■□□□ 1.31
DDX60-203ENST00000507815 FOXD1Q16676 465 aa22■■□□□ 1.11
DDX60-203ENST00000507815 POTEDQ86YR6 584 aa20.74■□□□□ 0.91
DDX60-203ENST00000507815 MSH5O43196 834 aa20.73■□□□□ 0.91
DDX60-203ENST00000507815 PLPPR3Q6T4P5 718 aa20.55■□□□□ 0.88
DDX60-203ENST00000507815 PIAS4Q8N2W9 510 aaPredicted RBP20.49■□□□□ 0.87
DDX60-203ENST00000507815 PPP6R1Q9UPN7 881 aa20.33■□□□□ 0.85
DDX60-203ENST00000507815 ADRA2BP18089 450 aa20.25■□□□□ 0.83
DDX60-203ENST00000507815 MAPK8IP2Q13387 824 aaPredicted RBP18.7■□□□□ 0.58
DDX60-203ENST00000507815 DMRT2Q9Y5R5 561 aa18.64■□□□□ 0.57
DDX60-203ENST00000507815 SCAF1Q9H7N4 1312 aaKnown RBP18.56■□□□□ 0.56
DDX60-203ENST00000507815 CACNB1Q02641 598 aaPredicted RBP17.98■□□□□ 0.47
DDX60-203ENST00000507815 PPP4R3CPQ6ZMV5 832 aa17.97■□□□□ 0.47
DDX60-203ENST00000507815 DCAF8L1A6NGE4 600 aa17.91■□□□□ 0.46
DDX60-203ENST00000507815 HOXD11P31277 338 aaPredicted RBP17.84■□□□□ 0.45
DDX60-203ENST00000507815 CNKSR2Q8WXI2 1034 aa17.7■□□□□ 0.42
DDX60-203ENST00000507815 RNF39Q9H2S5 420 aa17.65■□□□□ 0.42
DDX60-203ENST00000507815 RNF216Q9NWF9 866 aaPredicted RBP17.63■□□□□ 0.41
DDX60-203ENST00000507815 C1QBPQ07021 282 aaKnown RBP17.39■□□□□ 0.37
DDX60-203ENST00000507815 DNAJC5BQ9UF47 199 aa17.29■□□□□ 0.36
DDX60-203ENST00000507815 NCBP3Q53F19 620 aaKnown RBP17.2■□□□□ 0.34
DDX60-203ENST00000507815 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.01■□□□□ 0.31
DDX60-203ENST00000507815 NPM3O75607 178 aaKnown RBP16.93■□□□□ 0.3
DDX60-203ENST00000507815 U3KPZ7 1027 aaPredicted RBP16.6■□□□□ 0.25
DDX60-203ENST00000507815 CAPN15O75808 1086 aa16.46■□□□□ 0.23
DDX60-203ENST00000507815 SPINK5Q9NQ38 1064 aaPredicted RBP16.46■□□□□ 0.23
DDX60-203ENST00000507815 DSG3P32926 999 aa16.43■□□□□ 0.22
DDX60-203ENST00000507815 KCNA4P22459 653 aa16.32■□□□□ 0.2
DDX60-203ENST00000507815 SLC4A2P04920 1241 aa16.24■□□□□ 0.19
DDX60-203ENST00000507815 POTEHQ6S545 545 aa16.2■□□□□ 0.18
DDX60-203ENST00000507815 APLP2Q06481 763 aa16.13■□□□□ 0.17
DDX60-203ENST00000507815 TRHP20396 242 aaPredicted RBP16.12■□□□□ 0.17
DDX60-203ENST00000507815 ZNF219Q9P2Y4 722 aaPredicted RBP16.08■□□□□ 0.16
DDX60-203ENST00000507815 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.05■□□□□ 0.16
DDX60-203ENST00000507815 HNRNPUL2Q1KMD3 747 aaKnown RBP16.05■□□□□ 0.16
DDX60-203ENST00000507815 ABCB7O75027 752 aa16.03■□□□□ 0.16
DDX60-203ENST00000507815 SAMD1Q6SPF0 538 aaPredicted RBP15.93■□□□□ 0.14
DDX60-203ENST00000507815 RBM42Q9BTD8 480 aaKnown RBP15.7■□□□□ 0.1
DDX60-203ENST00000507815 MYCNP04198 464 aaPredicted RBP15.67■□□□□ 0.1
DDX60-203ENST00000507815 POLA2Q14181 598 aa15.61■□□□□ 0.09
DDX60-203ENST00000507815 CHRDL2Q6WN34 429 aa15.46■□□□□ 0.07
DDX60-203ENST00000507815 SLC4A1APQ9BWU0 796 aaKnown RBP15.36■□□□□ 0.05
DDX60-203ENST00000507815 FOXD4L1Q9NU39 408 aa15.34■□□□□ 0.05
DDX60-203ENST00000507815 ATF5Q9Y2D1 282 aaPredicted RBP15.32■□□□□ 0.04
DDX60-203ENST00000507815 ZBTB12Q9Y330 459 aaPredicted RBP15.27■□□□□ 0.04
DDX60-203ENST00000507815 AKT1S1Q96B36 256 aa15.26■□□□□ 0.03
DDX60-203ENST00000507815 REM2Q8IYK8 340 aaPredicted RBP15.12■□□□□ 0.01
DDX60-203ENST00000507815 OSCARQ8IYS5 282 aa15.12■□□□□ 0.01
DDX60-203ENST00000507815 SP7Q8TDD2 431 aaPredicted RBP15.04■□□□□ -0
DDX60-203ENST00000507815 PIP4P2Q8N4L2 257 aa15.02■□□□□ -0
DDX60-203ENST00000507815 ZBTB22O15209 634 aa14.99□□□□□ -0.01
DDX60-203ENST00000507815 PITPNM1O00562 1244 aa14.95□□□□□ -0.02
DDX60-203ENST00000507815 ATXN8OSP0DMR3 200 aa14.9□□□□□ -0.02
DDX60-203ENST00000507815 FXR2P51116 673 aaKnown RBP eCLIP14.89□□□□□ -0.03
DDX60-203ENST00000507815 HAX1O00165 279 aa14.85□□□□□ -0.03
DDX60-203ENST00000507815 SPDYE2BA6NHP3 402 aa14.78□□□□□ -0.04
DDX60-203ENST00000507815 SPDYE6P0CI01 402 aa14.78□□□□□ -0.04
DDX60-203ENST00000507815 SPDYE2Q495Y8 402 aa14.78□□□□□ -0.04
DDX60-203ENST00000507815 FBLN2P98095 1184 aa14.77□□□□□ -0.05
DDX60-203ENST00000507815 EVX2Q03828 476 aa14.62□□□□□ -0.07
DDX60-203ENST00000507815 MKRN4PQ13434 485 aaPredicted RBP14.6□□□□□ -0.07
DDX60-203ENST00000507815 SPDYE1Q8NFV5 336 aaPredicted RBP14.6□□□□□ -0.07
DDX60-203ENST00000507815 CLEC11AQ9Y240 323 aa14.59□□□□□ -0.07
DDX60-203ENST00000507815 PRKAR2AP13861 404 aaKnown RBP14.57□□□□□ -0.08
DDX60-203ENST00000507815 ZNF692Q9BU19 519 aaPredicted RBP14.55□□□□□ -0.08
DDX60-203ENST00000507815 SSUH2Q9Y2M2 353 aa14.53□□□□□ -0.08
DDX60-203ENST00000507815 C19orf67A6NJJ6 358 aa14.42□□□□□ -0.1
DDX60-203ENST00000507815 CHADLQ6NUI6 762 aa14.33□□□□□ -0.12
DDX60-203ENST00000507815 PABPN1Q86U42 306 aaKnown RBP eCLIP14.32□□□□□ -0.12
DDX60-203ENST00000507815 PRR29P0C7W0 189 aa14.31□□□□□ -0.12
DDX60-203ENST00000507815 GABBR2O75899 941 aa14.29□□□□□ -0.12
DDX60-203ENST00000507815 LHX8Q68G74 356 aa14.11□□□□□ -0.15
DDX60-203ENST00000507815 FARP1Q9Y4F1 1045 aaPredicted RBP14.1□□□□□ -0.15
DDX60-203ENST00000507815 CD44P16070 742 aaKnown RBP14.09□□□□□ -0.15
DDX60-203ENST00000507815 CSRNP3Q8WYN3 585 aa14.03□□□□□ -0.16
DDX60-203ENST00000507815 CLCN6P51797 869 aa13.98□□□□□ -0.17
DDX60-203ENST00000507815 POTEIP0CG38 1075 aa13.97□□□□□ -0.17
DDX60-203ENST00000507815 STAG3Q9UJ98 1225 aa13.88□□□□□ -0.19
DDX60-203ENST00000507815 CREBZFQ9NS37 354 aa13.86□□□□□ -0.19
DDX60-203ENST00000507815 ZNF579Q8NAF0 562 aaKnown RBP13.85□□□□□ -0.19
DDX60-203ENST00000507815 DCBLD2Q96PD2 775 aa13.85□□□□□ -0.19
DDX60-203ENST00000507815 ZRANB1Q9UGI0 708 aa13.84□□□□□ -0.19
DDX60-203ENST00000507815 SPDYE4A6NLX3 237 aa13.77□□□□□ -0.21
DDX60-203ENST00000507815 GALR2O43603 387 aaPredicted RBP13.7□□□□□ -0.22
DDX60-203ENST00000507815 EHMT2Q96KQ7 1210 aa13.69□□□□□ -0.22
DDX60-203ENST00000507815 PAK3O75914 559 aaPredicted RBP13.68□□□□□ -0.22
DDX60-203ENST00000507815 NPM1P06748 294 aaKnown RBP eCLIP13.62□□□□□ -0.23
DDX60-203ENST00000507815 PHF12Q96QT6 1004 aa13.61□□□□□ -0.23
DDX60-203ENST00000507815 MNX1P50219 401 aaPredicted RBP13.58□□□□□ -0.24
DDX60-203ENST00000507815 OTUD5Q96G74 571 aa13.52□□□□□ -0.25
DDX60-203ENST00000507815 POTEB2H3BUK9 544 aa13.5□□□□□ -0.25
DDX60-203ENST00000507815 PELP1Q8IZL8 1130 aaKnown RBP13.46□□□□□ -0.25
DDX60-203ENST00000507815 PLSCR2Q9NRY7 297 aa13.46□□□□□ -0.25
DDX60-203ENST00000507815 MS4A3Q96HJ5 214 aa13.42□□□□□ -0.26
DDX60-203ENST00000507815 ASTLQ6HA08 431 aaPredicted RBP13.4□□□□□ -0.26
DDX60-203ENST00000507815 PROM2Q8N271 834 aa13.37□□□□□ -0.27
DDX60-203ENST00000507815 ATMINO43313 823 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms