RNA–Protein interactions for RNA: ENST00000507632.2

CDH18-206, Transcript of cadherin 18, humanhuman

TSL 4

Gene CDH18, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH18-206ENST00000507632 AEBP2Q6ZN18 517 aaPredicted RBP25.06■■□□□ 1.6
CDH18-206ENST00000507632 CHIC1Q5VXU3 224 aa23.81■■□□□ 1.4
CDH18-206ENST00000507632 SENP3Q9H4L4 574 aaPredicted RBP21.3■■□□□ 1
CDH18-206ENST00000507632 PHF23Q9BUL5 403 aaPredicted RBP21.06■□□□□ 0.96
CDH18-206ENST00000507632 FOXD1Q16676 465 aa19.89■□□□□ 0.77
CDH18-206ENST00000507632 PLPPR3Q6T4P5 718 aa19.03■□□□□ 0.64
CDH18-206ENST00000507632 PPP6R1Q9UPN7 881 aa18.67■□□□□ 0.58
CDH18-206ENST00000507632 ADRA2BP18089 450 aa18.62■□□□□ 0.57
CDH18-206ENST00000507632 PIAS4Q8N2W9 510 aaPredicted RBP18.6■□□□□ 0.57
CDH18-206ENST00000507632 MSH5O43196 834 aa18.53■□□□□ 0.56
CDH18-206ENST00000507632 POTEDQ86YR6 584 aa18.21■□□□□ 0.51
CDH18-206ENST00000507632 MAPK8IP2Q13387 824 aaPredicted RBP17.09■□□□□ 0.33
CDH18-206ENST00000507632 SCAF1Q9H7N4 1312 aaKnown RBP16.95■□□□□ 0.3
CDH18-206ENST00000507632 DMRT2Q9Y5R5 561 aa16.91■□□□□ 0.3
CDH18-206ENST00000507632 PPP4R3CPQ6ZMV5 832 aa16.72■□□□□ 0.27
CDH18-206ENST00000507632 CNKSR2Q8WXI2 1034 aa16.37■□□□□ 0.21
CDH18-206ENST00000507632 HOXD11P31277 338 aaPredicted RBP16.3■□□□□ 0.2
CDH18-206ENST00000507632 DCAF8L1A6NGE4 600 aa16.26■□□□□ 0.19
CDH18-206ENST00000507632 RNF216Q9NWF9 866 aaPredicted RBP16.2■□□□□ 0.18
CDH18-206ENST00000507632 NCBP3Q53F19 620 aaKnown RBP16.05■□□□□ 0.16
CDH18-206ENST00000507632 CACNB1Q02641 598 aaPredicted RBP15.92■□□□□ 0.14
CDH18-206ENST00000507632 NPM3O75607 178 aaKnown RBP15.88■□□□□ 0.13
CDH18-206ENST00000507632 RNF39Q9H2S5 420 aa15.85■□□□□ 0.13
CDH18-206ENST00000507632 DNAJC5BQ9UF47 199 aa15.67■□□□□ 0.1
CDH18-206ENST00000507632 KCNA4P22459 653 aa15.65■□□□□ 0.1
CDH18-206ENST00000507632 C1QBPQ07021 282 aaKnown RBP15.58■□□□□ 0.08
CDH18-206ENST00000507632 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.56■□□□□ 0.08
CDH18-206ENST00000507632 U3KPZ7 1027 aaPredicted RBP15.25■□□□□ 0.03
CDH18-206ENST00000507632 SLC4A2P04920 1241 aa15.15■□□□□ 0.02
CDH18-206ENST00000507632 SPINK5Q9NQ38 1064 aaPredicted RBP15.04■□□□□ -0
CDH18-206ENST00000507632 CAPN15O75808 1086 aa14.99□□□□□ -0.01
CDH18-206ENST00000507632 DSG3P32926 999 aa14.88□□□□□ -0.03
CDH18-206ENST00000507632 TRHP20396 242 aaPredicted RBP14.78□□□□□ -0.04
CDH18-206ENST00000507632 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.77□□□□□ -0.05
CDH18-206ENST00000507632 HNRNPUL2Q1KMD3 747 aaKnown RBP14.77□□□□□ -0.05
CDH18-206ENST00000507632 SLC4A1APQ9BWU0 796 aaKnown RBP14.76□□□□□ -0.05
CDH18-206ENST00000507632 APLP2Q06481 763 aa14.74□□□□□ -0.05
CDH18-206ENST00000507632 SAMD1Q6SPF0 538 aaPredicted RBP14.71□□□□□ -0.05
CDH18-206ENST00000507632 ZNF219Q9P2Y4 722 aaPredicted RBP14.69□□□□□ -0.06
CDH18-206ENST00000507632 ABCB7O75027 752 aa14.67□□□□□ -0.06
CDH18-206ENST00000507632 MYCNP04198 464 aaPredicted RBP14.66□□□□□ -0.06
CDH18-206ENST00000507632 FOXD4L1Q9NU39 408 aa14.54□□□□□ -0.08
CDH18-206ENST00000507632 ZBTB22O15209 634 aa14.41□□□□□ -0.1
CDH18-206ENST00000507632 POLA2Q14181 598 aa14.38□□□□□ -0.11
CDH18-206ENST00000507632 ATF5Q9Y2D1 282 aaPredicted RBP14.38□□□□□ -0.11
CDH18-206ENST00000507632 POTEHQ6S545 545 aa14.25□□□□□ -0.13
CDH18-206ENST00000507632 RBM42Q9BTD8 480 aaKnown RBP14.14□□□□□ -0.15
CDH18-206ENST00000507632 ATXN8OSP0DMR3 200 aa14.05□□□□□ -0.16
CDH18-206ENST00000507632 ZBTB12Q9Y330 459 aaPredicted RBP14.03□□□□□ -0.16
CDH18-206ENST00000507632 OSCARQ8IYS5 282 aa13.93□□□□□ -0.18
CDH18-206ENST00000507632 CHRDL2Q6WN34 429 aa13.85□□□□□ -0.19
CDH18-206ENST00000507632 AKT1S1Q96B36 256 aa13.85□□□□□ -0.19
CDH18-206ENST00000507632 CSRNP3Q8WYN3 585 aa13.78□□□□□ -0.2
CDH18-206ENST00000507632 REM2Q8IYK8 340 aaPredicted RBP13.75□□□□□ -0.21
CDH18-206ENST00000507632 FBLN2P98095 1184 aa13.74□□□□□ -0.21
CDH18-206ENST00000507632 MKRN4PQ13434 485 aaPredicted RBP13.7□□□□□ -0.22
CDH18-206ENST00000507632 EHMT2Q96KQ7 1210 aa13.67□□□□□ -0.22
CDH18-206ENST00000507632 SPDYE2BA6NHP3 402 aa13.62□□□□□ -0.23
CDH18-206ENST00000507632 SPDYE6P0CI01 402 aa13.62□□□□□ -0.23
CDH18-206ENST00000507632 SPDYE2Q495Y8 402 aa13.62□□□□□ -0.23
CDH18-206ENST00000507632 PITPNM1O00562 1244 aa13.61□□□□□ -0.23
CDH18-206ENST00000507632 PIP4P2Q8N4L2 257 aa13.55□□□□□ -0.24
CDH18-206ENST00000507632 ZNF692Q9BU19 519 aaPredicted RBP13.5□□□□□ -0.25
CDH18-206ENST00000507632 SSUH2Q9Y2M2 353 aa13.46□□□□□ -0.25
CDH18-206ENST00000507632 FXR2P51116 673 aaKnown RBP eCLIP13.45□□□□□ -0.26
CDH18-206ENST00000507632 CLEC11AQ9Y240 323 aa13.4□□□□□ -0.26
CDH18-206ENST00000507632 SPDYE1Q8NFV5 336 aaPredicted RBP13.37□□□□□ -0.27
CDH18-206ENST00000507632 PABPN1Q86U42 306 aaKnown RBP eCLIP13.31□□□□□ -0.28
CDH18-206ENST00000507632 SP7Q8TDD2 431 aaPredicted RBP13.29□□□□□ -0.28
CDH18-206ENST00000507632 HAX1O00165 279 aa13.28□□□□□ -0.28
CDH18-206ENST00000507632 PRKAR2AP13861 404 aaKnown RBP13.26□□□□□ -0.29
CDH18-206ENST00000507632 PRR29P0C7W0 189 aa13.16□□□□□ -0.3
CDH18-206ENST00000507632 EVX2Q03828 476 aa13.16□□□□□ -0.3
CDH18-206ENST00000507632 CHADLQ6NUI6 762 aa13.15□□□□□ -0.3
CDH18-206ENST00000507632 SPDYE4A6NLX3 237 aa13.06□□□□□ -0.32
CDH18-206ENST00000507632 C19orf67A6NJJ6 358 aa13.02□□□□□ -0.33
CDH18-206ENST00000507632 FARP1Q9Y4F1 1045 aaPredicted RBP12.92□□□□□ -0.34
CDH18-206ENST00000507632 STAG3Q9UJ98 1225 aa12.9□□□□□ -0.34
CDH18-206ENST00000507632 CREBZFQ9NS37 354 aa12.86□□□□□ -0.35
CDH18-206ENST00000507632 CD44P16070 742 aaKnown RBP12.84□□□□□ -0.35
CDH18-206ENST00000507632 GABBR2O75899 941 aa12.83□□□□□ -0.36
CDH18-206ENST00000507632 PROM2Q8N271 834 aa12.73□□□□□ -0.37
CDH18-206ENST00000507632 ZRANB1Q9UGI0 708 aa12.67□□□□□ -0.38
CDH18-206ENST00000507632 MNX1P50219 401 aaPredicted RBP12.65□□□□□ -0.38
CDH18-206ENST00000507632 ZNF579Q8NAF0 562 aaKnown RBP12.62□□□□□ -0.39
CDH18-206ENST00000507632 NPM1P06748 294 aaKnown RBP eCLIP12.58□□□□□ -0.4
CDH18-206ENST00000507632 POTEIP0CG38 1075 aa12.58□□□□□ -0.4
CDH18-206ENST00000507632 CLCN6P51797 869 aa12.56□□□□□ -0.4
CDH18-206ENST00000507632 PAK3O75914 559 aaPredicted RBP12.54□□□□□ -0.4
CDH18-206ENST00000507632 PHF12Q96QT6 1004 aa12.52□□□□□ -0.41
CDH18-206ENST00000507632 GALR2O43603 387 aaPredicted RBP12.51□□□□□ -0.41
CDH18-206ENST00000507632 FKBP8Q14318 412 aa12.5□□□□□ -0.41
CDH18-206ENST00000507632 LHX8Q68G74 356 aa12.48□□□□□ -0.41
CDH18-206ENST00000507632 DCBLD2Q96PD2 775 aa12.48□□□□□ -0.41
CDH18-206ENST00000507632 MIER1Q8N108 512 aa12.46□□□□□ -0.41
CDH18-206ENST00000507632 TSPYL2Q9H2G4 693 aaPredicted RBP12.42□□□□□ -0.42
CDH18-206ENST00000507632 PLEKHG5O94827 1062 aa12.4□□□□□ -0.42
CDH18-206ENST00000507632 PLCD3Q8N3E9 789 aa12.36□□□□□ -0.43
CDH18-206ENST00000507632 MS4A3Q96HJ5 214 aa12.34□□□□□ -0.43
CDH18-206ENST00000507632 CCDC61Q9Y6R9 512 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms