RNA–Protein interactions for RNA: ENST00000507478.1

GIN1-202, Transcript of gypsy retrotransposon integrase 1, humanhuman

TSL 2

Gene GIN1, Length 462 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1-202ENST00000507478 AEBP2Q6ZN18 517 aaPredicted RBP30.02■■■□□ 2.4
GIN1-202ENST00000507478 CHIC1Q5VXU3 224 aa28.38■■■□□ 2.13
GIN1-202ENST00000507478 SENP3Q9H4L4 574 aaPredicted RBP25.74■■□□□ 1.71
GIN1-202ENST00000507478 PHF23Q9BUL5 403 aaPredicted RBP25.38■■□□□ 1.65
GIN1-202ENST00000507478 FOXD1Q16676 465 aa23.96■■□□□ 1.43
GIN1-202ENST00000507478 PLPPR3Q6T4P5 718 aa22.65■■□□□ 1.22
GIN1-202ENST00000507478 MSH5O43196 834 aa22.57■■□□□ 1.2
GIN1-202ENST00000507478 PIAS4Q8N2W9 510 aaPredicted RBP22.41■■□□□ 1.18
GIN1-202ENST00000507478 POTEDQ86YR6 584 aa22.28■■□□□ 1.16
GIN1-202ENST00000507478 PPP6R1Q9UPN7 881 aa22.25■■□□□ 1.15
GIN1-202ENST00000507478 ADRA2BP18089 450 aa22.21■■□□□ 1.15
GIN1-202ENST00000507478 MAPK8IP2Q13387 824 aaPredicted RBP20.45■□□□□ 0.86
GIN1-202ENST00000507478 SCAF1Q9H7N4 1312 aaKnown RBP20.44■□□□□ 0.86
GIN1-202ENST00000507478 DMRT2Q9Y5R5 561 aa20.35■□□□□ 0.85
GIN1-202ENST00000507478 PPP4R3CPQ6ZMV5 832 aa19.82■□□□□ 0.76
GIN1-202ENST00000507478 DCAF8L1A6NGE4 600 aa19.66■□□□□ 0.74
GIN1-202ENST00000507478 CACNB1Q02641 598 aaPredicted RBP19.52■□□□□ 0.72
GIN1-202ENST00000507478 HOXD11P31277 338 aaPredicted RBP19.51■□□□□ 0.71
GIN1-202ENST00000507478 CNKSR2Q8WXI2 1034 aa19.5■□□□□ 0.71
GIN1-202ENST00000507478 RNF216Q9NWF9 866 aaPredicted RBP19.35■□□□□ 0.69
GIN1-202ENST00000507478 RNF39Q9H2S5 420 aa19.18■□□□□ 0.66
GIN1-202ENST00000507478 NCBP3Q53F19 620 aaKnown RBP19.08■□□□□ 0.64
GIN1-202ENST00000507478 C1QBPQ07021 282 aaKnown RBP18.95■□□□□ 0.62
GIN1-202ENST00000507478 DNAJC5BQ9UF47 199 aa18.88■□□□□ 0.61
GIN1-202ENST00000507478 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.71■□□□□ 0.59
GIN1-202ENST00000507478 NPM3O75607 178 aaKnown RBP18.69■□□□□ 0.58
GIN1-202ENST00000507478 KCNA4P22459 653 aa18.17■□□□□ 0.5
GIN1-202ENST00000507478 U3KPZ7 1027 aaPredicted RBP18.17■□□□□ 0.5
GIN1-202ENST00000507478 CAPN15O75808 1086 aa18.06■□□□□ 0.48
GIN1-202ENST00000507478 SPINK5Q9NQ38 1064 aaPredicted RBP17.99■□□□□ 0.47
GIN1-202ENST00000507478 DSG3P32926 999 aa17.91■□□□□ 0.46
GIN1-202ENST00000507478 SLC4A2P04920 1241 aa17.86■□□□□ 0.45
GIN1-202ENST00000507478 APLP2Q06481 763 aa17.8■□□□□ 0.44
GIN1-202ENST00000507478 TRHP20396 242 aaPredicted RBP17.73■□□□□ 0.43
GIN1-202ENST00000507478 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.72■□□□□ 0.43
GIN1-202ENST00000507478 HNRNPUL2Q1KMD3 747 aaKnown RBP17.72■□□□□ 0.43
GIN1-202ENST00000507478 ZNF219Q9P2Y4 722 aaPredicted RBP17.65■□□□□ 0.42
GIN1-202ENST00000507478 ABCB7O75027 752 aa17.58■□□□□ 0.4
GIN1-202ENST00000507478 SAMD1Q6SPF0 538 aaPredicted RBP17.58■□□□□ 0.4
GIN1-202ENST00000507478 POTEHQ6S545 545 aa17.46■□□□□ 0.39
GIN1-202ENST00000507478 MYCNP04198 464 aaPredicted RBP17.33■□□□□ 0.36
GIN1-202ENST00000507478 POLA2Q14181 598 aa17.19■□□□□ 0.34
GIN1-202ENST00000507478 RBM42Q9BTD8 480 aaKnown RBP17.17■□□□□ 0.34
GIN1-202ENST00000507478 SLC4A1APQ9BWU0 796 aaKnown RBP17.17■□□□□ 0.34
GIN1-202ENST00000507478 FOXD4L1Q9NU39 408 aa17.04■□□□□ 0.32
GIN1-202ENST00000507478 ATF5Q9Y2D1 282 aaPredicted RBP16.88■□□□□ 0.29
GIN1-202ENST00000507478 ZBTB12Q9Y330 459 aaPredicted RBP16.84■□□□□ 0.29
GIN1-202ENST00000507478 CHRDL2Q6WN34 429 aa16.83■□□□□ 0.28
GIN1-202ENST00000507478 AKT1S1Q96B36 256 aa16.71■□□□□ 0.27
GIN1-202ENST00000507478 ZBTB22O15209 634 aa16.62■□□□□ 0.25
GIN1-202ENST00000507478 OSCARQ8IYS5 282 aa16.58■□□□□ 0.24
GIN1-202ENST00000507478 ATXN8OSP0DMR3 200 aa16.55■□□□□ 0.24
GIN1-202ENST00000507478 REM2Q8IYK8 340 aaPredicted RBP16.54■□□□□ 0.24
GIN1-202ENST00000507478 FBLN2P98095 1184 aa16.38■□□□□ 0.21
GIN1-202ENST00000507478 PIP4P2Q8N4L2 257 aa16.37■□□□□ 0.21
GIN1-202ENST00000507478 PITPNM1O00562 1244 aa16.33■□□□□ 0.2
GIN1-202ENST00000507478 SP7Q8TDD2 431 aaPredicted RBP16.28■□□□□ 0.2
GIN1-202ENST00000507478 SPDYE2BA6NHP3 402 aa16.26■□□□□ 0.19
GIN1-202ENST00000507478 SPDYE6P0CI01 402 aa16.26■□□□□ 0.19
GIN1-202ENST00000507478 SPDYE2Q495Y8 402 aa16.26■□□□□ 0.19
GIN1-202ENST00000507478 FXR2P51116 673 aaKnown RBP eCLIP16.23■□□□□ 0.19
GIN1-202ENST00000507478 HAX1O00165 279 aa16.22■□□□□ 0.19
GIN1-202ENST00000507478 ZNF692Q9BU19 519 aaPredicted RBP16.1■□□□□ 0.17
GIN1-202ENST00000507478 CLEC11AQ9Y240 323 aa16.09■□□□□ 0.17
GIN1-202ENST00000507478 MKRN4PQ13434 485 aaPredicted RBP16.08■□□□□ 0.16
GIN1-202ENST00000507478 SPDYE1Q8NFV5 336 aaPredicted RBP16.06■□□□□ 0.16
GIN1-202ENST00000507478 PRKAR2AP13861 404 aaKnown RBP15.97■□□□□ 0.15
GIN1-202ENST00000507478 SSUH2Q9Y2M2 353 aa15.96■□□□□ 0.15
GIN1-202ENST00000507478 EVX2Q03828 476 aa15.87■□□□□ 0.13
GIN1-202ENST00000507478 PABPN1Q86U42 306 aaKnown RBP eCLIP15.82■□□□□ 0.12
GIN1-202ENST00000507478 PRR29P0C7W0 189 aa15.79■□□□□ 0.12
GIN1-202ENST00000507478 CSRNP3Q8WYN3 585 aa15.75■□□□□ 0.11
GIN1-202ENST00000507478 C19orf67A6NJJ6 358 aa15.72■□□□□ 0.11
GIN1-202ENST00000507478 CHADLQ6NUI6 762 aa15.72■□□□□ 0.11
GIN1-202ENST00000507478 GABBR2O75899 941 aa15.56■□□□□ 0.08
GIN1-202ENST00000507478 EHMT2Q96KQ7 1210 aa15.52■□□□□ 0.08
GIN1-202ENST00000507478 FARP1Q9Y4F1 1045 aaPredicted RBP15.48■□□□□ 0.07
GIN1-202ENST00000507478 CD44P16070 742 aaKnown RBP15.44■□□□□ 0.06
GIN1-202ENST00000507478 STAG3Q9UJ98 1225 aa15.39■□□□□ 0.05
GIN1-202ENST00000507478 SPDYE4A6NLX3 237 aa15.33■□□□□ 0.04
GIN1-202ENST00000507478 CLCN6P51797 869 aa15.32■□□□□ 0.04
GIN1-202ENST00000507478 LHX8Q68G74 356 aa15.3■□□□□ 0.04
GIN1-202ENST00000507478 CREBZFQ9NS37 354 aa15.25■□□□□ 0.03
GIN1-202ENST00000507478 ZRANB1Q9UGI0 708 aa15.22■□□□□ 0.03
GIN1-202ENST00000507478 DCBLD2Q96PD2 775 aa15.19■□□□□ 0.02
GIN1-202ENST00000507478 POTEIP0CG38 1075 aa15.16■□□□□ 0.02
GIN1-202ENST00000507478 ZNF579Q8NAF0 562 aaKnown RBP15.14■□□□□ 0.01
GIN1-202ENST00000507478 PAK3O75914 559 aaPredicted RBP15.12■□□□□ 0.01
GIN1-202ENST00000507478 NPM1P06748 294 aaKnown RBP eCLIP15.08■□□□□ 0
GIN1-202ENST00000507478 GALR2O43603 387 aaPredicted RBP14.98□□□□□ -0.01
GIN1-202ENST00000507478 PHF12Q96QT6 1004 aa14.93□□□□□ -0.02
GIN1-202ENST00000507478 MNX1P50219 401 aaPredicted RBP14.91□□□□□ -0.02
GIN1-202ENST00000507478 PROM2Q8N271 834 aa14.8□□□□□ -0.04
GIN1-202ENST00000507478 PLEKHG5O94827 1062 aa14.78□□□□□ -0.04
GIN1-202ENST00000507478 TSPYL2Q9H2G4 693 aaPredicted RBP14.78□□□□□ -0.04
GIN1-202ENST00000507478 MIER1Q8N108 512 aa14.72□□□□□ -0.05
GIN1-202ENST00000507478 MS4A3Q96HJ5 214 aa14.72□□□□□ -0.05
GIN1-202ENST00000507478 PELP1Q8IZL8 1130 aaKnown RBP14.69□□□□□ -0.06
GIN1-202ENST00000507478 OTUD5Q96G74 571 aa14.68□□□□□ -0.06
GIN1-202ENST00000507478 POTEB2H3BUK9 544 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms