RNA–Protein interactions for RNA: ENST00000507196.1

CENPC-204, Transcript of centromere protein C, humanhuman

TSL 2

Gene CENPC, Length 508 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPC-204ENST00000507196 AEBP2Q6ZN18 517 aaPredicted RBP23.5■■□□□ 1.35
CENPC-204ENST00000507196 CHIC1Q5VXU3 224 aa22.58■■□□□ 1.21
CENPC-204ENST00000507196 SENP3Q9H4L4 574 aaPredicted RBP19.92■□□□□ 0.78
CENPC-204ENST00000507196 PHF23Q9BUL5 403 aaPredicted RBP19.87■□□□□ 0.77
CENPC-204ENST00000507196 FOXD1Q16676 465 aa18.58■□□□□ 0.56
CENPC-204ENST00000507196 PLPPR3Q6T4P5 718 aa18.16■□□□□ 0.5
CENPC-204ENST00000507196 PPP6R1Q9UPN7 881 aa17.65■□□□□ 0.42
CENPC-204ENST00000507196 ADRA2BP18089 450 aa17.59■□□□□ 0.41
CENPC-204ENST00000507196 PIAS4Q8N2W9 510 aaPredicted RBP17.4■□□□□ 0.38
CENPC-204ENST00000507196 MSH5O43196 834 aa17.2■□□□□ 0.34
CENPC-204ENST00000507196 POTEDQ86YR6 584 aa16.3■□□□□ 0.2
CENPC-204ENST00000507196 MAPK8IP2Q13387 824 aaPredicted RBP16.08■□□□□ 0.16
CENPC-204ENST00000507196 SCAF1Q9H7N4 1312 aaKnown RBP16.02■□□□□ 0.16
CENPC-204ENST00000507196 PPP4R3CPQ6ZMV5 832 aa15.98■□□□□ 0.15
CENPC-204ENST00000507196 DMRT2Q9Y5R5 561 aa15.87■□□□□ 0.13
CENPC-204ENST00000507196 CNKSR2Q8WXI2 1034 aa15.59■□□□□ 0.09
CENPC-204ENST00000507196 HOXD11P31277 338 aaPredicted RBP15.42■□□□□ 0.06
CENPC-204ENST00000507196 NCBP3Q53F19 620 aaKnown RBP15.41■□□□□ 0.06
CENPC-204ENST00000507196 RNF216Q9NWF9 866 aaPredicted RBP15.37■□□□□ 0.05
CENPC-204ENST00000507196 NPM3O75607 178 aaKnown RBP15.25■□□□□ 0.03
CENPC-204ENST00000507196 KCNA4P22459 653 aa15.25■□□□□ 0.03
CENPC-204ENST00000507196 DCAF8L1A6NGE4 600 aa15.17■□□□□ 0.02
CENPC-204ENST00000507196 DNAJC5BQ9UF47 199 aa14.85□□□□□ -0.03
CENPC-204ENST00000507196 RNF39Q9H2S5 420 aa14.75□□□□□ -0.05
CENPC-204ENST00000507196 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.65□□□□□ -0.062e-6■■□□□ 12
CENPC-204ENST00000507196 CACNB1Q02641 598 aaPredicted RBP14.58□□□□□ -0.08
CENPC-204ENST00000507196 C1QBPQ07021 282 aaKnown RBP14.53□□□□□ -0.08
CENPC-204ENST00000507196 SLC4A2P04920 1241 aa14.51□□□□□ -0.09
CENPC-204ENST00000507196 U3KPZ7 1027 aaPredicted RBP14.43□□□□□ -0.1
CENPC-204ENST00000507196 SLC4A1APQ9BWU0 796 aaKnown RBP14.42□□□□□ -0.1
CENPC-204ENST00000507196 SPINK5Q9NQ38 1064 aaPredicted RBP14.13□□□□□ -0.15
CENPC-204ENST00000507196 FOXD4L1Q9NU39 408 aa14.09□□□□□ -0.15
CENPC-204ENST00000507196 MYCNP04198 464 aaPredicted RBP14.06□□□□□ -0.16
CENPC-204ENST00000507196 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.05□□□□□ -0.16
CENPC-204ENST00000507196 ZBTB22O15209 634 aa14.05□□□□□ -0.16
CENPC-204ENST00000507196 HNRNPUL2Q1KMD3 747 aaKnown RBP14.05□□□□□ -0.16
CENPC-204ENST00000507196 CAPN15O75808 1086 aa14.04□□□□□ -0.16
CENPC-204ENST00000507196 SAMD1Q6SPF0 538 aaPredicted RBP14□□□□□ -0.17
CENPC-204ENST00000507196 APLP2Q06481 763 aa13.96□□□□□ -0.17
CENPC-204ENST00000507196 DSG3P32926 999 aa13.93□□□□□ -0.18
CENPC-204ENST00000507196 TRHP20396 242 aaPredicted RBP13.9□□□□□ -0.18
CENPC-204ENST00000507196 ZNF219Q9P2Y4 722 aaPredicted RBP13.86□□□□□ -0.19
CENPC-204ENST00000507196 ATF5Q9Y2D1 282 aaPredicted RBP13.78□□□□□ -0.2
CENPC-204ENST00000507196 ABCB7O75027 752 aa13.77□□□□□ -0.21
CENPC-204ENST00000507196 CSRNP3Q8WYN3 585 aa13.68□□□□□ -0.22
CENPC-204ENST00000507196 POLA2Q14181 598 aa13.63□□□□□ -0.23
CENPC-204ENST00000507196 EHMT2Q96KQ7 1210 aa13.63□□□□□ -0.23
CENPC-204ENST00000507196 ATXN8OSP0DMR3 200 aa13.62□□□□□ -0.23
CENPC-204ENST00000507196 ZBTB12Q9Y330 459 aaPredicted RBP13.31□□□□□ -0.28
CENPC-204ENST00000507196 RBM42Q9BTD8 480 aaKnown RBP13.21□□□□□ -0.29
CENPC-204ENST00000507196 MKRN4PQ13434 485 aaPredicted RBP13.16□□□□□ -0.3
CENPC-204ENST00000507196 OSCARQ8IYS5 282 aa13.16□□□□□ -0.3
CENPC-204ENST00000507196 FBLN2P98095 1184 aa13.13□□□□□ -0.31
CENPC-204ENST00000507196 AKT1S1Q96B36 256 aa13.01□□□□□ -0.33
CENPC-204ENST00000507196 SPDYE2BA6NHP3 402 aa12.96□□□□□ -0.33
CENPC-204ENST00000507196 SPDYE6P0CI01 402 aa12.96□□□□□ -0.33
CENPC-204ENST00000507196 SPDYE2Q495Y8 402 aa12.96□□□□□ -0.33
CENPC-204ENST00000507196 REM2Q8IYK8 340 aaPredicted RBP12.91□□□□□ -0.34
CENPC-204ENST00000507196 ZNF692Q9BU19 519 aaPredicted RBP12.87□□□□□ -0.35
CENPC-204ENST00000507196 SSUH2Q9Y2M2 353 aa12.85□□□□□ -0.35
CENPC-204ENST00000507196 CHRDL2Q6WN34 429 aa12.84□□□□□ -0.35
CENPC-204ENST00000507196 POTEHQ6S545 545 aa12.82□□□□□ -0.36
CENPC-204ENST00000507196 PITPNM1O00562 1244 aa12.76□□□□□ -0.37
CENPC-204ENST00000507196 PABPN1Q86U42 306 aaKnown RBP eCLIP12.69□□□□□ -0.38
CENPC-204ENST00000507196 SPDYE4A6NLX3 237 aa12.65□□□□□ -0.38
CENPC-204ENST00000507196 SPDYE1Q8NFV5 336 aaPredicted RBP12.64□□□□□ -0.39
CENPC-204ENST00000507196 CLEC11AQ9Y240 323 aa12.62□□□□□ -0.39
CENPC-204ENST00000507196 PIP4P2Q8N4L2 257 aa12.61□□□□□ -0.39
CENPC-204ENST00000507196 FXR2P51116 673 aaKnown RBP eCLIP12.6□□□□□ -0.39
CENPC-204ENST00000507196 PRR29P0C7W0 189 aa12.46□□□□□ -0.41
CENPC-204ENST00000507196 PRKAR2AP13861 404 aaKnown RBP12.43□□□□□ -0.42
CENPC-204ENST00000507196 PROM2Q8N271 834 aa12.42□□□□□ -0.42
CENPC-204ENST00000507196 CHADLQ6NUI6 762 aa12.38□□□□□ -0.43
CENPC-204ENST00000507196 STAG3Q9UJ98 1225 aa12.37□□□□□ -0.43
CENPC-204ENST00000507196 FKBP8Q14318 412 aa12.35□□□□□ -0.43
CENPC-204ENST00000507196 HAX1O00165 279 aa12.29□□□□□ -0.44
CENPC-204ENST00000507196 CREBZFQ9NS37 354 aa12.26□□□□□ -0.45
CENPC-204ENST00000507196 EVX2Q03828 476 aa12.23□□□□□ -0.45
CENPC-204ENST00000507196 FARP1Q9Y4F1 1045 aaPredicted RBP12.22□□□□□ -0.45
CENPC-204ENST00000507196 C19orf67A6NJJ6 358 aa12.18□□□□□ -0.46
CENPC-204ENST00000507196 SP7Q8TDD2 431 aaPredicted RBP12.16□□□□□ -0.46
CENPC-204ENST00000507196 MNX1P50219 401 aaPredicted RBP12.11□□□□□ -0.47
CENPC-204ENST00000507196 CD44P16070 742 aaKnown RBP12.05□□□□□ -0.48
CENPC-204ENST00000507196 MIER1Q8N108 512 aa12.03□□□□□ -0.48
CENPC-204ENST00000507196 NPM1P06748 294 aaKnown RBP eCLIP11.98□□□□□ -0.49
CENPC-204ENST00000507196 FBXO3Q9UK99 471 aa11.96□□□□□ -0.49
CENPC-204ENST00000507196 PLCD3Q8N3E9 789 aa11.95□□□□□ -0.5
CENPC-204ENST00000507196 ZRANB1Q9UGI0 708 aa11.93□□□□□ -0.5
CENPC-204ENST00000507196 GABBR2O75899 941 aa11.92□□□□□ -0.5
CENPC-204ENST00000507196 PLEKHG5O94827 1062 aa11.92□□□□□ -0.5
CENPC-204ENST00000507196 ZNF579Q8NAF0 562 aaKnown RBP11.88□□□□□ -0.51
CENPC-204ENST00000507196 PAK3O75914 559 aaPredicted RBP11.85□□□□□ -0.51
CENPC-204ENST00000507196 VASPP50552 380 aaPredicted RBP11.84□□□□□ -0.51
CENPC-204ENST00000507196 TSPYL2Q9H2G4 693 aaPredicted RBP11.82□□□□□ -0.52
CENPC-204ENST00000507196 RASEFQ8IZ41 740 aa11.81□□□□□ -0.52
CENPC-204ENST00000507196 PHF12Q96QT6 1004 aa11.81□□□□□ -0.52
CENPC-204ENST00000507196 ZBTB47Q9UFB7 747 aaPredicted RBP11.81□□□□□ -0.52
CENPC-204ENST00000507196 CLCN6P51797 869 aa11.79□□□□□ -0.52
CENPC-204ENST00000507196 NUBP1P53384 320 aa11.79□□□□□ -0.52
CENPC-204ENST00000507196 CCDC61Q9Y6R9 512 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms