RNA–Protein interactions for RNA: ENST00000507194.1

ATP2C1-211, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 3

Gene ATP2C1, Length 651 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-211ENST00000507194 AEBP2Q6ZN18 517 aaPredicted RBP25.18■■□□□ 1.62
ATP2C1-211ENST00000507194 CHIC1Q5VXU3 224 aa25.04■■□□□ 1.6
ATP2C1-211ENST00000507194 PHF23Q9BUL5 403 aaPredicted RBP22.04■■□□□ 1.12
ATP2C1-211ENST00000507194 SENP3Q9H4L4 574 aaPredicted RBP21.37■■□□□ 1.01
ATP2C1-211ENST00000507194 PLPPR3Q6T4P5 718 aa20.58■□□□□ 0.89
ATP2C1-211ENST00000507194 FOXD1Q16676 465 aa19.75■□□□□ 0.75
ATP2C1-211ENST00000507194 ADRA2BP18089 450 aa19.4■□□□□ 0.7
ATP2C1-211ENST00000507194 PPP6R1Q9UPN7 881 aa19.32■□□□□ 0.68
ATP2C1-211ENST00000507194 PIAS4Q8N2W9 510 aaPredicted RBP18.81■□□□□ 0.6
ATP2C1-211ENST00000507194 KCNA4P22459 653 aa18.26■□□□□ 0.51
ATP2C1-211ENST00000507194 PPP4R3CPQ6ZMV5 832 aa18.19■□□□□ 0.5
ATP2C1-211ENST00000507194 MSH5O43196 834 aa18.07■□□□□ 0.48
ATP2C1-211ENST00000507194 NCBP3Q53F19 620 aaKnown RBP17.89■□□□□ 0.45
ATP2C1-211ENST00000507194 SCAF1Q9H7N4 1312 aaKnown RBP17.78■□□□□ 0.44
ATP2C1-211ENST00000507194 EHMT2Q96KQ7 1210 aa17.6■□□□□ 0.41
ATP2C1-211ENST00000507194 CNKSR2Q8WXI2 1034 aa17.57■□□□□ 0.4
ATP2C1-211ENST00000507194 NPM3O75607 178 aaKnown RBP17.56■□□□□ 0.4
ATP2C1-211ENST00000507194 SLC4A1APQ9BWU0 796 aaKnown RBP17.52■□□□□ 0.4
ATP2C1-211ENST00000507194 MAPK8IP2Q13387 824 aaPredicted RBP17.46■□□□□ 0.39
ATP2C1-211ENST00000507194 RNF216Q9NWF9 866 aaPredicted RBP17.1■□□□□ 0.33
ATP2C1-211ENST00000507194 DMRT2Q9Y5R5 561 aa17.09■□□□□ 0.33
ATP2C1-211ENST00000507194 CSRNP3Q8WYN3 585 aa17.05■□□□□ 0.32
ATP2C1-211ENST00000507194 HOXD11P31277 338 aaPredicted RBP16.87■□□□□ 0.29
ATP2C1-211ENST00000507194 DNAJC5BQ9UF47 199 aa16.81■□□□□ 0.28
ATP2C1-211ENST00000507194 ZBTB22O15209 634 aa16.76■□□□□ 0.27
ATP2C1-211ENST00000507194 FOXD4L1Q9NU39 408 aa16.69■□□□□ 0.26
ATP2C1-211ENST00000507194 DCAF8L1A6NGE4 600 aa16.53■□□□□ 0.24
ATP2C1-211ENST00000507194 SLC4A2P04920 1241 aa16.43■□□□□ 0.22
ATP2C1-211ENST00000507194 MYCNP04198 464 aaPredicted RBP16.24■□□□□ 0.19
ATP2C1-211ENST00000507194 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.24■□□□□ 0.19
ATP2C1-211ENST00000507194 ATXN8OSP0DMR3 200 aa16.02■□□□□ 0.16
ATP2C1-211ENST00000507194 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.93■□□□□ 0.14
ATP2C1-211ENST00000507194 HNRNPUL2Q1KMD3 747 aaKnown RBP15.93■□□□□ 0.14
ATP2C1-211ENST00000507194 U3KPZ7 1027 aaPredicted RBP15.92■□□□□ 0.14
ATP2C1-211ENST00000507194 SAMD1Q6SPF0 538 aaPredicted RBP15.89■□□□□ 0.13
ATP2C1-211ENST00000507194 ATF5Q9Y2D1 282 aaPredicted RBP15.74■□□□□ 0.11
ATP2C1-211ENST00000507194 APLP2Q06481 763 aa15.69■□□□□ 0.1
ATP2C1-211ENST00000507194 POTEDQ86YR6 584 aa15.67■□□□□ 0.1
ATP2C1-211ENST00000507194 FKBP8Q14318 412 aa15.49■□□□□ 0.07
ATP2C1-211ENST00000507194 ZNF219Q9P2Y4 722 aaPredicted RBP15.49■□□□□ 0.07
ATP2C1-211ENST00000507194 RNF39Q9H2S5 420 aa15.48■□□□□ 0.07
ATP2C1-211ENST00000507194 TRHP20396 242 aaPredicted RBP15.42■□□□□ 0.06
ATP2C1-211ENST00000507194 CAPN15O75808 1086 aa15.39■□□□□ 0.05
ATP2C1-211ENST00000507194 SPINK5Q9NQ38 1064 aaPredicted RBP15.38■□□□□ 0.05
ATP2C1-211ENST00000507194 C1QBPQ07021 282 aaKnown RBP15.35■□□□□ 0.05
ATP2C1-211ENST00000507194 POLA2Q14181 598 aa15.21■□□□□ 0.03
ATP2C1-211ENST00000507194 FBLN2P98095 1184 aa15.17■□□□□ 0.02
ATP2C1-211ENST00000507194 ABCB7O75027 752 aa15.12■□□□□ 0.01
ATP2C1-211ENST00000507194 MKRN4PQ13434 485 aaPredicted RBP15.06■□□□□ 0
ATP2C1-211ENST00000507194 SPDYE4A6NLX3 237 aa15.03■□□□□ -0
ATP2C1-211ENST00000507194 ZBTB12Q9Y330 459 aaPredicted RBP14.99□□□□□ -0.01
ATP2C1-211ENST00000507194 DSG3P32926 999 aa14.9□□□□□ -0.02
ATP2C1-211ENST00000507194 CACNB1Q02641 598 aaPredicted RBP14.88□□□□□ -0.03
ATP2C1-211ENST00000507194 AMER1Q5JTC6 1135 aaPredicted RBP14.86□□□□□ -0.03
ATP2C1-211ENST00000507194 RTN4Q9NQC3 1192 aaKnown RBP14.82□□□□□ -0.04
ATP2C1-211ENST00000507194 FBXO3Q9UK99 471 aa14.8□□□□□ -0.04
ATP2C1-211ENST00000507194 OSCARQ8IYS5 282 aa14.68□□□□□ -0.06
ATP2C1-211ENST00000507194 PROM2Q8N271 834 aa14.68□□□□□ -0.06
ATP2C1-211ENST00000507194 ZNF692Q9BU19 519 aaPredicted RBP14.66□□□□□ -0.06
ATP2C1-211ENST00000507194 SPDYE2BA6NHP3 402 aa14.59□□□□□ -0.07
ATP2C1-211ENST00000507194 SPDYE6P0CI01 402 aa14.59□□□□□ -0.07
ATP2C1-211ENST00000507194 SPDYE2Q495Y8 402 aa14.59□□□□□ -0.07
ATP2C1-211ENST00000507194 VASPP50552 380 aaPredicted RBP14.56□□□□□ -0.08
ATP2C1-211ENST00000507194 PABPN1Q86U42 306 aaKnown RBP eCLIP14.48□□□□□ -0.09
ATP2C1-211ENST00000507194 SSUH2Q9Y2M2 353 aa14.47□□□□□ -0.09
ATP2C1-211ENST00000507194 IFNLR1Q8IU57 520 aaPredicted RBP14.36□□□□□ -0.11
ATP2C1-211ENST00000507194 STAG3Q9UJ98 1225 aa14.36□□□□□ -0.11
ATP2C1-211ENST00000507194 KLHL34Q8N239 644 aa14.33□□□□□ -0.12
ATP2C1-211ENST00000507194 PLCD3Q8N3E9 789 aa14.31□□□□□ -0.12
ATP2C1-211ENST00000507194 MIER1Q8N108 512 aa14.26□□□□□ -0.13
ATP2C1-211ENST00000507194 RBM42Q9BTD8 480 aaKnown RBP14.25□□□□□ -0.13
ATP2C1-211ENST00000507194 PLEKHG5O94827 1062 aa14.2□□□□□ -0.14
ATP2C1-211ENST00000507194 SPOCK2Q92563 424 aa14.18□□□□□ -0.14
ATP2C1-211ENST00000507194 SLC24A1O60721 1099 aa14.15□□□□□ -0.14
ATP2C1-211ENST00000507194 DCAF8L2P0C7V8 631 aa14.14□□□□□ -0.15
ATP2C1-211ENST00000507194 AKT1S1Q96B36 256 aa14.13□□□□□ -0.15
ATP2C1-211ENST00000507194 SPDYE1Q8NFV5 336 aaPredicted RBP14.09□□□□□ -0.15
ATP2C1-211ENST00000507194 CLEC11AQ9Y240 323 aa14.09□□□□□ -0.15
ATP2C1-211ENST00000507194 ZBTB47Q9UFB7 747 aaPredicted RBP14.07□□□□□ -0.16
ATP2C1-211ENST00000507194 PKD2Q13563 968 aa14.03□□□□□ -0.16
ATP2C1-211ENST00000507194 REM2Q8IYK8 340 aaPredicted RBP14□□□□□ -0.17
ATP2C1-211ENST00000507194 PRR29P0C7W0 189 aa13.98□□□□□ -0.17
ATP2C1-211ENST00000507194 ECM2O94769 699 aaPredicted RBP13.97□□□□□ -0.17
ATP2C1-211ENST00000507194 CIZ1Q9ULV3 898 aaPredicted RBP13.96□□□□□ -0.17
ATP2C1-211ENST00000507194 PITPNM1O00562 1244 aa13.84□□□□□ -0.19
ATP2C1-211ENST00000507194 CREBZFQ9NS37 354 aa13.81□□□□□ -0.2
ATP2C1-211ENST00000507194 RGL2O15211 777 aa13.77□□□□□ -0.21
ATP2C1-211ENST00000507194 GSE1Q14687 1217 aa13.77□□□□□ -0.21
ATP2C1-211ENST00000507194 DCAF8Q5TAQ9 597 aa13.77□□□□□ -0.21
ATP2C1-211ENST00000507194 TRIM41Q8WV44 630 aa13.74□□□□□ -0.21
ATP2C1-211ENST00000507194 PLCB2Q00722 1185 aa13.73□□□□□ -0.21
ATP2C1-211ENST00000507194 NUBP1P53384 320 aa13.72□□□□□ -0.21
ATP2C1-211ENST00000507194 FAM212AQ96EL1 285 aa13.71□□□□□ -0.21
ATP2C1-211ENST00000507194 NPM1P06748 294 aaKnown RBP eCLIP13.68□□□□□ -0.22
ATP2C1-211ENST00000507194 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.67□□□□□ -0.22
ATP2C1-211ENST00000507194 MNX1P50219 401 aaPredicted RBP13.65□□□□□ -0.22
ATP2C1-211ENST00000507194 HAP1P54257 671 aaPredicted RBP13.64□□□□□ -0.23
ATP2C1-211ENST00000507194 CHADLQ6NUI6 762 aa13.64□□□□□ -0.23
ATP2C1-211ENST00000507194 CHGAP10645 457 aaKnown RBP13.62□□□□□ -0.23
ATP2C1-211ENST00000507194 BBXQ8WY36 941 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms