RNA–Protein interactions for RNA: ENST00000506993.1

SGMS2-208, Transcript of sphingomyelin synthase 2, humanhuman

TSL 3

Gene SGMS2, Length 570 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2-208ENST00000506993 AEBP2Q6ZN18 517 aaPredicted RBP25.48■■□□□ 1.67
SGMS2-208ENST00000506993 CHIC1Q5VXU3 224 aa24.71■■□□□ 1.55
SGMS2-208ENST00000506993 SENP3Q9H4L4 574 aaPredicted RBP21.69■■□□□ 1.06
SGMS2-208ENST00000506993 PHF23Q9BUL5 403 aaPredicted RBP21.68■■□□□ 1.06
SGMS2-208ENST00000506993 FOXD1Q16676 465 aa20.12■□□□□ 0.81
SGMS2-208ENST00000506993 PLPPR3Q6T4P5 718 aa19.98■□□□□ 0.79
SGMS2-208ENST00000506993 PPP6R1Q9UPN7 881 aa19.17■□□□□ 0.66
SGMS2-208ENST00000506993 ADRA2BP18089 450 aa19.14■□□□□ 0.65
SGMS2-208ENST00000506993 PIAS4Q8N2W9 510 aaPredicted RBP18.94■□□□□ 0.62
SGMS2-208ENST00000506993 MSH5O43196 834 aa18.67■□□□□ 0.58
SGMS2-208ENST00000506993 PPP4R3CPQ6ZMV5 832 aa17.56■□□□□ 0.4
SGMS2-208ENST00000506993 SCAF1Q9H7N4 1312 aaKnown RBP17.55■□□□□ 0.4
SGMS2-208ENST00000506993 MAPK8IP2Q13387 824 aaPredicted RBP17.41■□□□□ 0.38
SGMS2-208ENST00000506993 POTEDQ86YR6 584 aa17.4■□□□□ 0.38
SGMS2-208ENST00000506993 DMRT2Q9Y5R5 561 aa17.28■□□□□ 0.36
SGMS2-208ENST00000506993 CNKSR2Q8WXI2 1034 aa17.13■□□□□ 0.33
SGMS2-208ENST00000506993 NCBP3Q53F19 620 aaKnown RBP17.05■□□□□ 0.32
SGMS2-208ENST00000506993 KCNA4P22459 653 aa16.91■□□□□ 0.3
SGMS2-208ENST00000506993 RNF216Q9NWF9 866 aaPredicted RBP16.85■□□□□ 0.29
SGMS2-208ENST00000506993 HOXD11P31277 338 aaPredicted RBP16.84■□□□□ 0.29
SGMS2-208ENST00000506993 NPM3O75607 178 aaKnown RBP16.8■□□□□ 0.28
SGMS2-208ENST00000506993 DCAF8L1A6NGE4 600 aa16.49■□□□□ 0.23
SGMS2-208ENST00000506993 DNAJC5BQ9UF47 199 aa16.4■□□□□ 0.22
SGMS2-208ENST00000506993 SLC4A1APQ9BWU0 796 aaKnown RBP16.07■□□□□ 0.16
SGMS2-208ENST00000506993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.01■□□□□ 0.15
SGMS2-208ENST00000506993 RNF39Q9H2S5 420 aa15.96■□□□□ 0.15
SGMS2-208ENST00000506993 SLC4A2P04920 1241 aa15.9■□□□□ 0.14
SGMS2-208ENST00000506993 C1QBPQ07021 282 aaKnown RBP15.77■□□□□ 0.12
SGMS2-208ENST00000506993 U3KPZ7 1027 aaPredicted RBP15.76■□□□□ 0.11
SGMS2-208ENST00000506993 CACNB1Q02641 598 aaPredicted RBP15.67■□□□□ 0.1
SGMS2-208ENST00000506993 FOXD4L1Q9NU39 408 aa15.66■□□□□ 0.1
SGMS2-208ENST00000506993 ZBTB22O15209 634 aa15.56■□□□□ 0.08
SGMS2-208ENST00000506993 MYCNP04198 464 aaPredicted RBP15.55■□□□□ 0.08
SGMS2-208ENST00000506993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.5■□□□□ 0.07
SGMS2-208ENST00000506993 HNRNPUL2Q1KMD3 747 aaKnown RBP15.5■□□□□ 0.07
SGMS2-208ENST00000506993 SAMD1Q6SPF0 538 aaPredicted RBP15.44■□□□□ 0.06
SGMS2-208ENST00000506993 APLP2Q06481 763 aa15.41■□□□□ 0.06
SGMS2-208ENST00000506993 EHMT2Q96KQ7 1210 aa15.35■□□□□ 0.05
SGMS2-208ENST00000506993 SPINK5Q9NQ38 1064 aaPredicted RBP15.35■□□□□ 0.05
SGMS2-208ENST00000506993 CAPN15O75808 1086 aa15.3■□□□□ 0.04
SGMS2-208ENST00000506993 CSRNP3Q8WYN3 585 aa15.29■□□□□ 0.04
SGMS2-208ENST00000506993 ZNF219Q9P2Y4 722 aaPredicted RBP15.22■□□□□ 0.03
SGMS2-208ENST00000506993 TRHP20396 242 aaPredicted RBP15.17■□□□□ 0.02
SGMS2-208ENST00000506993 ATXN8OSP0DMR3 200 aa15.13■□□□□ 0.01
SGMS2-208ENST00000506993 DSG3P32926 999 aa15.11■□□□□ 0.01
SGMS2-208ENST00000506993 ATF5Q9Y2D1 282 aaPredicted RBP15.1■□□□□ 0.01
SGMS2-208ENST00000506993 ABCB7O75027 752 aa14.99□□□□□ -0.01
SGMS2-208ENST00000506993 POLA2Q14181 598 aa14.88□□□□□ -0.03
SGMS2-208ENST00000506993 ZBTB12Q9Y330 459 aaPredicted RBP14.68□□□□□ -0.06
SGMS2-208ENST00000506993 FBLN2P98095 1184 aa14.51□□□□□ -0.09
SGMS2-208ENST00000506993 MKRN4PQ13434 485 aaPredicted RBP14.45□□□□□ -0.1
SGMS2-208ENST00000506993 RBM42Q9BTD8 480 aaKnown RBP14.44□□□□□ -0.1
SGMS2-208ENST00000506993 OSCARQ8IYS5 282 aa14.41□□□□□ -0.1
SGMS2-208ENST00000506993 SPDYE2BA6NHP3 402 aa14.25□□□□□ -0.13
SGMS2-208ENST00000506993 SPDYE6P0CI01 402 aa14.25□□□□□ -0.13
SGMS2-208ENST00000506993 SPDYE2Q495Y8 402 aa14.25□□□□□ -0.13
SGMS2-208ENST00000506993 NISCHQ9Y2I1 1504 aa14.21□□□□□ -0.13
SGMS2-208ENST00000506993 AKT1S1Q96B36 256 aa14.2□□□□□ -0.14
SGMS2-208ENST00000506993 ZNF692Q9BU19 519 aaPredicted RBP14.13□□□□□ -0.15
SGMS2-208ENST00000506993 SSUH2Q9Y2M2 353 aa14.13□□□□□ -0.15
SGMS2-208ENST00000506993 REM2Q8IYK8 340 aaPredicted RBP14.04□□□□□ -0.16
SGMS2-208ENST00000506993 SPDYE4A6NLX3 237 aa14.03□□□□□ -0.16
SGMS2-208ENST00000506993 PABPN1Q86U42 306 aaKnown RBP eCLIP13.94□□□□□ -0.18
SGMS2-208ENST00000506993 PITPNM1O00562 1244 aa13.9□□□□□ -0.18
SGMS2-208ENST00000506993 CHRDL2Q6WN34 429 aa13.89□□□□□ -0.19
SGMS2-208ENST00000506993 SPDYE1Q8NFV5 336 aaPredicted RBP13.87□□□□□ -0.19
SGMS2-208ENST00000506993 FKBP8Q14318 412 aa13.84□□□□□ -0.19
SGMS2-208ENST00000506993 PROM2Q8N271 834 aa13.81□□□□□ -0.2
SGMS2-208ENST00000506993 CLEC11AQ9Y240 323 aa13.79□□□□□ -0.2
SGMS2-208ENST00000506993 POTEHQ6S545 545 aa13.69□□□□□ -0.22
SGMS2-208ENST00000506993 STAG3Q9UJ98 1225 aa13.69□□□□□ -0.22
SGMS2-208ENST00000506993 FXR2P51116 673 aaKnown RBP eCLIP13.68□□□□□ -0.22
SGMS2-208ENST00000506993 PIP4P2Q8N4L2 257 aa13.66□□□□□ -0.22
SGMS2-208ENST00000506993 PRR29P0C7W0 189 aa13.64□□□□□ -0.23
SGMS2-208ENST00000506993 PRKAR2AP13861 404 aaKnown RBP13.53□□□□□ -0.24
SGMS2-208ENST00000506993 CHADLQ6NUI6 762 aa13.47□□□□□ -0.25
SGMS2-208ENST00000506993 CREBZFQ9NS37 354 aa13.44□□□□□ -0.26
SGMS2-208ENST00000506993 FBXO3Q9UK99 471 aa13.43□□□□□ -0.26
SGMS2-208ENST00000506993 FARP1Q9Y4F1 1045 aaPredicted RBP13.34□□□□□ -0.27
SGMS2-208ENST00000506993 PLEKHG5O94827 1062 aa13.29□□□□□ -0.28
SGMS2-208ENST00000506993 MIER1Q8N108 512 aa13.29□□□□□ -0.28
SGMS2-208ENST00000506993 MNX1P50219 401 aaPredicted RBP13.27□□□□□ -0.29
SGMS2-208ENST00000506993 PLCD3Q8N3E9 789 aa13.27□□□□□ -0.29
SGMS2-208ENST00000506993 HAX1O00165 279 aa13.25□□□□□ -0.29
SGMS2-208ENST00000506993 VASPP50552 380 aaPredicted RBP13.25□□□□□ -0.29
SGMS2-208ENST00000506993 C19orf67A6NJJ6 358 aa13.22□□□□□ -0.29
SGMS2-208ENST00000506993 NPM1P06748 294 aaKnown RBP eCLIP13.22□□□□□ -0.29
SGMS2-208ENST00000506993 ZBTB47Q9UFB7 747 aaPredicted RBP13.18□□□□□ -0.3
SGMS2-208ENST00000506993 CD44P16070 742 aaKnown RBP13.15□□□□□ -0.3
SGMS2-208ENST00000506993 EVX2Q03828 476 aa13.12□□□□□ -0.31
SGMS2-208ENST00000506993 SP7Q8TDD2 431 aaPredicted RBP13.08□□□□□ -0.32
SGMS2-208ENST00000506993 PAK3O75914 559 aaPredicted RBP13.05□□□□□ -0.32
SGMS2-208ENST00000506993 IFNLR1Q8IU57 520 aaPredicted RBP13.03□□□□□ -0.32
SGMS2-208ENST00000506993 KLHL34Q8N239 644 aa13.03□□□□□ -0.32
SGMS2-208ENST00000506993 ZRANB1Q9UGI0 708 aa13.03□□□□□ -0.32
SGMS2-208ENST00000506993 NUBP1P53384 320 aa13.01□□□□□ -0.33
SGMS2-208ENST00000506993 RASEFQ8IZ41 740 aa13□□□□□ -0.33
SGMS2-208ENST00000506993 ZNF579Q8NAF0 562 aaKnown RBP12.99□□□□□ -0.33
SGMS2-208ENST00000506993 TSPYL2Q9H2G4 693 aaPredicted RBP12.96□□□□□ -0.33
SGMS2-208ENST00000506993 FAM212AQ96EL1 285 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms