RNA–Protein interactions for RNA: ENST00000506987.1

SRP19-205, Transcript of signal recognition particle 19, humanhuman

TSL 2

Gene SRP19, Length 727 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP19-205ENST00000506987 AEBP2Q6ZN18 517 aaPredicted RBP23.94■■□□□ 1.42
SRP19-205ENST00000506987 CHIC1Q5VXU3 224 aa22.46■■□□□ 1.19
SRP19-205ENST00000506987 SENP3Q9H4L4 574 aaPredicted RBP20.4■□□□□ 0.86
SRP19-205ENST00000506987 PHF23Q9BUL5 403 aaPredicted RBP20.11■□□□□ 0.81
SRP19-205ENST00000506987 FOXD1Q16676 465 aa19.08■□□□□ 0.64
SRP19-205ENST00000506987 POTEDQ86YR6 584 aa17.92■□□□□ 0.46
SRP19-205ENST00000506987 MSH5O43196 834 aa17.9■□□□□ 0.46
SRP19-205ENST00000506987 PLPPR3Q6T4P5 718 aa17.81■□□□□ 0.44
SRP19-205ENST00000506987 PIAS4Q8N2W9 510 aaPredicted RBP17.72■□□□□ 0.43
SRP19-205ENST00000506987 PPP6R1Q9UPN7 881 aa17.68■□□□□ 0.42
SRP19-205ENST00000506987 ADRA2BP18089 450 aa17.57■□□□□ 0.4
SRP19-205ENST00000506987 MAPK8IP2Q13387 824 aaPredicted RBP16.22■□□□□ 0.19
SRP19-205ENST00000506987 DMRT2Q9Y5R5 561 aa16.16■□□□□ 0.18
SRP19-205ENST00000506987 SCAF1Q9H7N4 1312 aaKnown RBP16.02■□□□□ 0.16
SRP19-205ENST00000506987 PPP4R3CPQ6ZMV5 832 aa15.58■□□□□ 0.08
SRP19-205ENST00000506987 HOXD11P31277 338 aaPredicted RBP15.49■□□□□ 0.07
SRP19-205ENST00000506987 CACNB1Q02641 598 aaPredicted RBP15.48■□□□□ 0.07
SRP19-205ENST00000506987 DCAF8L1A6NGE4 600 aa15.42■□□□□ 0.06
SRP19-205ENST00000506987 CNKSR2Q8WXI2 1034 aa15.34■□□□□ 0.05
SRP19-205ENST00000506987 RNF39Q9H2S5 420 aa15.3■□□□□ 0.04
SRP19-205ENST00000506987 RNF216Q9NWF9 866 aaPredicted RBP15.28■□□□□ 0.04
SRP19-205ENST00000506987 C1QBPQ07021 282 aaKnown RBP15.03■□□□□ -0
SRP19-205ENST00000506987 DNAJC5BQ9UF47 199 aa15.01□□□□□ -0.01
SRP19-205ENST00000506987 NCBP3Q53F19 620 aaKnown RBP14.86□□□□□ -0.03
SRP19-205ENST00000506987 NPM3O75607 178 aaKnown RBP14.72□□□□□ -0.05
SRP19-205ENST00000506987 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.67□□□□□ -0.06
SRP19-205ENST00000506987 KCNA4P22459 653 aa14.55□□□□□ -0.08
SRP19-205ENST00000506987 U3KPZ7 1027 aaPredicted RBP14.41□□□□□ -0.1
SRP19-205ENST00000506987 SPINK5Q9NQ38 1064 aaPredicted RBP14.27□□□□□ -0.13
SRP19-205ENST00000506987 DSG3P32926 999 aa14.23□□□□□ -0.13
SRP19-205ENST00000506987 CAPN15O75808 1086 aa14.19□□□□□ -0.14
SRP19-205ENST00000506987 SLC4A2P04920 1241 aa14.14□□□□□ -0.15
SRP19-205ENST00000506987 POTEHQ6S545 545 aa13.98□□□□□ -0.17
SRP19-205ENST00000506987 TRHP20396 242 aaPredicted RBP13.91□□□□□ -0.18
SRP19-205ENST00000506987 ZNF219Q9P2Y4 722 aaPredicted RBP13.89□□□□□ -0.19
SRP19-205ENST00000506987 APLP2Q06481 763 aa13.88□□□□□ -0.19
SRP19-205ENST00000506987 ABCB7O75027 752 aa13.86□□□□□ -0.19
SRP19-205ENST00000506987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.85□□□□□ -0.19
SRP19-205ENST00000506987 HNRNPUL2Q1KMD3 747 aaKnown RBP13.85□□□□□ -0.19
SRP19-205ENST00000506987 SAMD1Q6SPF0 538 aaPredicted RBP13.77□□□□□ -0.21
SRP19-205ENST00000506987 SLC4A1APQ9BWU0 796 aaKnown RBP13.75□□□□□ -0.21
SRP19-205ENST00000506987 MYCNP04198 464 aaPredicted RBP13.58□□□□□ -0.24
SRP19-205ENST00000506987 RBM42Q9BTD8 480 aaKnown RBP13.53□□□□□ -0.24
SRP19-205ENST00000506987 POLA2Q14181 598 aa13.51□□□□□ -0.25
SRP19-205ENST00000506987 ZBTB22O15209 634 aa13.4□□□□□ -0.26
SRP19-205ENST00000506987 FOXD4L1Q9NU39 408 aa13.39□□□□□ -0.27
SRP19-205ENST00000506987 CHRDL2Q6WN34 429 aa13.37□□□□□ -0.27
SRP19-205ENST00000506987 ATF5Q9Y2D1 282 aaPredicted RBP13.34□□□□□ -0.27
SRP19-205ENST00000506987 AKT1S1Q96B36 256 aa13.19□□□□□ -0.3
SRP19-205ENST00000506987 ZBTB12Q9Y330 459 aaPredicted RBP13.19□□□□□ -0.3
SRP19-205ENST00000506987 EHMT2Q96KQ7 1210 aa13.13□□□□□ -0.31
SRP19-205ENST00000506987 REM2Q8IYK8 340 aaPredicted RBP13.09□□□□□ -0.31
SRP19-205ENST00000506987 OSCARQ8IYS5 282 aa13.09□□□□□ -0.31
SRP19-205ENST00000506987 CSRNP3Q8WYN3 585 aa13.09□□□□□ -0.31
SRP19-205ENST00000506987 PIP4P2Q8N4L2 257 aa13.01□□□□□ -0.33
SRP19-205ENST00000506987 SP7Q8TDD2 431 aaPredicted RBP12.99□□□□□ -0.33
SRP19-205ENST00000506987 PITPNM1O00562 1244 aa12.96□□□□□ -0.33
SRP19-205ENST00000506987 ATXN8OSP0DMR3 200 aa12.94□□□□□ -0.34
SRP19-205ENST00000506987 FXR2P51116 673 aaKnown RBP eCLIP12.9□□□□□ -0.34
SRP19-205ENST00000506987 SPDYE2BA6NHP3 402 aa12.79□□□□□ -0.36
SRP19-205ENST00000506987 HAX1O00165 279 aa12.79□□□□□ -0.36
SRP19-205ENST00000506987 SPDYE6P0CI01 402 aa12.79□□□□□ -0.36
SRP19-205ENST00000506987 SPDYE2Q495Y8 402 aa12.79□□□□□ -0.36
SRP19-205ENST00000506987 FBLN2P98095 1184 aa12.75□□□□□ -0.37
SRP19-205ENST00000506987 MKRN4PQ13434 485 aaPredicted RBP12.72□□□□□ -0.37
SRP19-205ENST00000506987 EVX2Q03828 476 aa12.7□□□□□ -0.38
SRP19-205ENST00000506987 SSUH2Q9Y2M2 353 aa12.63□□□□□ -0.39
SRP19-205ENST00000506987 SPDYE1Q8NFV5 336 aaPredicted RBP12.61□□□□□ -0.39
SRP19-205ENST00000506987 PRKAR2AP13861 404 aaKnown RBP12.59□□□□□ -0.39
SRP19-205ENST00000506987 ZNF692Q9BU19 519 aaPredicted RBP12.57□□□□□ -0.4
SRP19-205ENST00000506987 CLEC11AQ9Y240 323 aa12.57□□□□□ -0.4
SRP19-205ENST00000506987 C19orf67A6NJJ6 358 aa12.49□□□□□ -0.41
SRP19-205ENST00000506987 CHADLQ6NUI6 762 aa12.4□□□□□ -0.42
SRP19-205ENST00000506987 PABPN1Q86U42 306 aaKnown RBP eCLIP12.39□□□□□ -0.43
SRP19-205ENST00000506987 GABBR2O75899 941 aa12.35□□□□□ -0.43
SRP19-205ENST00000506987 PRR29P0C7W0 189 aa12.34□□□□□ -0.43
SRP19-205ENST00000506987 FARP1Q9Y4F1 1045 aaPredicted RBP12.2□□□□□ -0.46
SRP19-205ENST00000506987 CD44P16070 742 aaKnown RBP12.17□□□□□ -0.46
SRP19-205ENST00000506987 LHX8Q68G74 356 aa12.17□□□□□ -0.46
SRP19-205ENST00000506987 POTEIP0CG38 1075 aa12.14□□□□□ -0.47
SRP19-205ENST00000506987 CLCN6P51797 869 aa12.06□□□□□ -0.48
SRP19-205ENST00000506987 SPDYE4A6NLX3 237 aa12.04□□□□□ -0.48
SRP19-205ENST00000506987 CREBZFQ9NS37 354 aa12.03□□□□□ -0.48
SRP19-205ENST00000506987 ZNF579Q8NAF0 562 aaKnown RBP12□□□□□ -0.49
SRP19-205ENST00000506987 STAG3Q9UJ98 1225 aa11.98□□□□□ -0.49
SRP19-205ENST00000506987 ZRANB1Q9UGI0 708 aa11.95□□□□□ -0.5
SRP19-205ENST00000506987 DCBLD2Q96PD2 775 aa11.91□□□□□ -0.5
SRP19-205ENST00000506987 GALR2O43603 387 aaPredicted RBP11.87□□□□□ -0.51
SRP19-205ENST00000506987 MNX1P50219 401 aaPredicted RBP11.85□□□□□ -0.51
SRP19-205ENST00000506987 FKBP8Q14318 412 aa11.84□□□□□ -0.51
SRP19-205ENST00000506987 PHF12Q96QT6 1004 aa11.79□□□□□ -0.52
SRP19-205ENST00000506987 PROM2Q8N271 834 aa11.77□□□□□ -0.53
SRP19-205ENST00000506987 PAK3O75914 559 aaPredicted RBP11.76□□□□□ -0.53
SRP19-205ENST00000506987 POTEB2H3BUK9 544 aa11.74□□□□□ -0.53
SRP19-205ENST00000506987 NPM1P06748 294 aaKnown RBP eCLIP11.74□□□□□ -0.53
SRP19-205ENST00000506987 OTUD5Q96G74 571 aa11.72□□□□□ -0.53
SRP19-205ENST00000506987 PELP1Q8IZL8 1130 aaKnown RBP11.69□□□□□ -0.54
SRP19-205ENST00000506987 ASTLQ6HA08 431 aaPredicted RBP11.62□□□□□ -0.55
SRP19-205ENST00000506987 MS4A3Q96HJ5 214 aa11.62□□□□□ -0.55
SRP19-205ENST00000506987 ATMINO43313 823 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms