RNA–Protein interactions for RNA: ENST00000506739.1

LINC01085-202, Transcript of long intergenic non-protein coding RNA 1085, humanhuman

TSL 1 (best)

Gene LINC01085, Length 1,184 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01085-202ENST00000506739 AEBP2Q6ZN18 517 aaPredicted RBP23.73■■□□□ 1.39
LINC01085-202ENST00000506739 CHIC1Q5VXU3 224 aa22.65■■□□□ 1.22
LINC01085-202ENST00000506739 SENP3Q9H4L4 574 aaPredicted RBP20.35■□□□□ 0.85
LINC01085-202ENST00000506739 PHF23Q9BUL5 403 aaPredicted RBP20■□□□□ 0.79
LINC01085-202ENST00000506739 FOXD1Q16676 465 aa18.99■□□□□ 0.63
LINC01085-202ENST00000506739 POTEDQ86YR6 584 aa18.26■□□□□ 0.51
LINC01085-202ENST00000506739 PLPPR3Q6T4P5 718 aa18.25■□□□□ 0.51
LINC01085-202ENST00000506739 MSH5O43196 834 aa17.97■□□□□ 0.47
LINC01085-202ENST00000506739 PIAS4Q8N2W9 510 aaPredicted RBP17.67■□□□□ 0.42
LINC01085-202ENST00000506739 ADRA2BP18089 450 aa17.64■□□□□ 0.41
LINC01085-202ENST00000506739 PPP6R1Q9UPN7 881 aa17.63■□□□□ 0.41
LINC01085-202ENST00000506739 SCAF1Q9H7N4 1312 aaKnown RBP16.31■□□□□ 0.2
LINC01085-202ENST00000506739 MAPK8IP2Q13387 824 aaPredicted RBP16.14■□□□□ 0.17
LINC01085-202ENST00000506739 DMRT2Q9Y5R5 561 aa16.05■□□□□ 0.16
LINC01085-202ENST00000506739 PPP4R3CPQ6ZMV5 832 aa15.98■□□□□ 0.15
LINC01085-202ENST00000506739 CACNB1Q02641 598 aaPredicted RBP15.69■□□□□ 0.1
LINC01085-202ENST00000506739 CNKSR2Q8WXI2 1034 aa15.67■□□□□ 0.1
LINC01085-202ENST00000506739 DCAF8L1A6NGE4 600 aa15.52■□□□□ 0.08
LINC01085-202ENST00000506739 NCBP3Q53F19 620 aaKnown RBP15.52■□□□□ 0.08
LINC01085-202ENST00000506739 HOXD11P31277 338 aaPredicted RBP15.5■□□□□ 0.07
LINC01085-202ENST00000506739 RNF216Q9NWF9 866 aaPredicted RBP15.47■□□□□ 0.07
LINC01085-202ENST00000506739 RNF39Q9H2S5 420 aa15.29■□□□□ 0.04
LINC01085-202ENST00000506739 NPM3O75607 178 aaKnown RBP15.16■□□□□ 0.02
LINC01085-202ENST00000506739 C1QBPQ07021 282 aaKnown RBP15.04■□□□□ -0
LINC01085-202ENST00000506739 KCNA4P22459 653 aa14.99□□□□□ -0.01
LINC01085-202ENST00000506739 DNAJC5BQ9UF47 199 aa14.96□□□□□ -0.01
LINC01085-202ENST00000506739 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.89□□□□□ -0.03
LINC01085-202ENST00000506739 U3KPZ7 1027 aaPredicted RBP14.48□□□□□ -0.09
LINC01085-202ENST00000506739 SLC4A2P04920 1241 aa14.38□□□□□ -0.11
LINC01085-202ENST00000506739 CAPN15O75808 1086 aa14.3□□□□□ -0.12
LINC01085-202ENST00000506739 APLP2Q06481 763 aa14.3□□□□□ -0.12
LINC01085-202ENST00000506739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.28□□□□□ -0.12
LINC01085-202ENST00000506739 HNRNPUL2Q1KMD3 747 aaKnown RBP14.28□□□□□ -0.12
LINC01085-202ENST00000506739 SLC4A1APQ9BWU0 796 aaKnown RBP14.27□□□□□ -0.13
LINC01085-202ENST00000506739 POTEHQ6S545 545 aa14.23□□□□□ -0.13
LINC01085-202ENST00000506739 SPINK5Q9NQ38 1064 aaPredicted RBP14.22□□□□□ -0.13
LINC01085-202ENST00000506739 SAMD1Q6SPF0 538 aaPredicted RBP14.17□□□□□ -0.14
LINC01085-202ENST00000506739 DSG3P32926 999 aa14.16□□□□□ -0.14
LINC01085-202ENST00000506739 TRHP20396 242 aaPredicted RBP14.11□□□□□ -0.15
LINC01085-202ENST00000506739 ZNF219Q9P2Y4 722 aaPredicted RBP14.1□□□□□ -0.15
LINC01085-202ENST00000506739 MYCNP04198 464 aaPredicted RBP14.09□□□□□ -0.15
LINC01085-202ENST00000506739 FOXD4L1Q9NU39 408 aa14.01□□□□□ -0.17
LINC01085-202ENST00000506739 ABCB7O75027 752 aa13.93□□□□□ -0.18
LINC01085-202ENST00000506739 POLA2Q14181 598 aa13.72□□□□□ -0.21
LINC01085-202ENST00000506739 ZBTB22O15209 634 aa13.71□□□□□ -0.21
LINC01085-202ENST00000506739 ATF5Q9Y2D1 282 aaPredicted RBP13.62□□□□□ -0.23
LINC01085-202ENST00000506739 ATXN8OSP0DMR3 200 aa13.58□□□□□ -0.24
LINC01085-202ENST00000506739 RBM42Q9BTD8 480 aaKnown RBP13.56□□□□□ -0.24
LINC01085-202ENST00000506739 ZBTB12Q9Y330 459 aaPredicted RBP13.55□□□□□ -0.24
LINC01085-202ENST00000506739 CHRDL2Q6WN34 429 aa13.41□□□□□ -0.26
LINC01085-202ENST00000506739 EHMT2Q96KQ7 1210 aa13.29□□□□□ -0.28
LINC01085-202ENST00000506739 FBLN2P98095 1184 aa13.28□□□□□ -0.28
LINC01085-202ENST00000506739 CSRNP3Q8WYN3 585 aa13.27□□□□□ -0.29
LINC01085-202ENST00000506739 OSCARQ8IYS5 282 aa13.26□□□□□ -0.29
LINC01085-202ENST00000506739 AKT1S1Q96B36 256 aa13.22□□□□□ -0.29
LINC01085-202ENST00000506739 SP7Q8TDD2 431 aaPredicted RBP13.14□□□□□ -0.31
LINC01085-202ENST00000506739 SPDYE2BA6NHP3 402 aa13.07□□□□□ -0.32
LINC01085-202ENST00000506739 SPDYE6P0CI01 402 aa13.07□□□□□ -0.32
LINC01085-202ENST00000506739 SPDYE2Q495Y8 402 aa13.07□□□□□ -0.32
LINC01085-202ENST00000506739 REM2Q8IYK8 340 aaPredicted RBP13.06□□□□□ -0.32
LINC01085-202ENST00000506739 MKRN4PQ13434 485 aaPredicted RBP13.01□□□□□ -0.33
LINC01085-202ENST00000506739 PIP4P2Q8N4L2 257 aa12.99□□□□□ -0.33
LINC01085-202ENST00000506739 ZNF692Q9BU19 519 aaPredicted RBP12.97□□□□□ -0.33
LINC01085-202ENST00000506739 PITPNM1O00562 1244 aa12.91□□□□□ -0.34
LINC01085-202ENST00000506739 HAX1O00165 279 aa12.88□□□□□ -0.35
LINC01085-202ENST00000506739 SSUH2Q9Y2M2 353 aa12.85□□□□□ -0.35
LINC01085-202ENST00000506739 FXR2P51116 673 aaKnown RBP eCLIP12.84□□□□□ -0.35
LINC01085-202ENST00000506739 SPDYE1Q8NFV5 336 aaPredicted RBP12.84□□□□□ -0.35
LINC01085-202ENST00000506739 CLEC11AQ9Y240 323 aa12.82□□□□□ -0.36
LINC01085-202ENST00000506739 PABPN1Q86U42 306 aaKnown RBP eCLIP12.75□□□□□ -0.37
LINC01085-202ENST00000506739 EVX2Q03828 476 aa12.66□□□□□ -0.38
LINC01085-202ENST00000506739 PRR29P0C7W0 189 aa12.63□□□□□ -0.39
LINC01085-202ENST00000506739 PRKAR2AP13861 404 aaKnown RBP12.62□□□□□ -0.39
LINC01085-202ENST00000506739 SPDYE4A6NLX3 237 aa12.59□□□□□ -0.39
LINC01085-202ENST00000506739 STAG3Q9UJ98 1225 aa12.51□□□□□ -0.41
LINC01085-202ENST00000506739 CHADLQ6NUI6 762 aa12.47□□□□□ -0.41
LINC01085-202ENST00000506739 C19orf67A6NJJ6 358 aa12.45□□□□□ -0.42
LINC01085-202ENST00000506739 GABBR2O75899 941 aa12.38□□□□□ -0.43
LINC01085-202ENST00000506739 FARP1Q9Y4F1 1045 aaPredicted RBP12.34□□□□□ -0.43
LINC01085-202ENST00000506739 LHX8Q68G74 356 aa12.32□□□□□ -0.44
LINC01085-202ENST00000506739 CD44P16070 742 aaKnown RBP12.25□□□□□ -0.45
LINC01085-202ENST00000506739 CREBZFQ9NS37 354 aa12.24□□□□□ -0.45
LINC01085-202ENST00000506739 PROM2Q8N271 834 aa12.19□□□□□ -0.46
LINC01085-202ENST00000506739 NPM1P06748 294 aaKnown RBP eCLIP12.17□□□□□ -0.46
LINC01085-202ENST00000506739 PAK3O75914 559 aaPredicted RBP12.14□□□□□ -0.47
LINC01085-202ENST00000506739 PLEKHG5O94827 1062 aa12.14□□□□□ -0.47
LINC01085-202ENST00000506739 FKBP8Q14318 412 aa12.12□□□□□ -0.47
LINC01085-202ENST00000506739 CLCN6P51797 869 aa12.1□□□□□ -0.47
LINC01085-202ENST00000506739 ZRANB1Q9UGI0 708 aa12.1□□□□□ -0.47
LINC01085-202ENST00000506739 POTEIP0CG38 1075 aa12.09□□□□□ -0.47
LINC01085-202ENST00000506739 MIER1Q8N108 512 aa12.05□□□□□ -0.48
LINC01085-202ENST00000506739 ZNF579Q8NAF0 562 aaKnown RBP12.02□□□□□ -0.49
LINC01085-202ENST00000506739 MNX1P50219 401 aaPredicted RBP12□□□□□ -0.49
LINC01085-202ENST00000506739 PLCD3Q8N3E9 789 aa12□□□□□ -0.49
LINC01085-202ENST00000506739 DCBLD2Q96PD2 775 aa11.96□□□□□ -0.49
LINC01085-202ENST00000506739 ZBTB47Q9UFB7 747 aaPredicted RBP11.93□□□□□ -0.5
LINC01085-202ENST00000506739 FBXO3Q9UK99 471 aa11.91□□□□□ -0.5
LINC01085-202ENST00000506739 PLSCR2Q9NRY7 297 aa11.9□□□□□ -0.5
LINC01085-202ENST00000506739 PHF12Q96QT6 1004 aa11.89□□□□□ -0.51
LINC01085-202ENST00000506739 TSPYL2Q9H2G4 693 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms