RNA–Protein interactions for RNA: ENST00000506661.2

HOPX-208, Transcript of HOP homeobox, humanhuman

Gene HOPX, Length 2,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOPX-208ENST00000506661 CHIC1Q5VXU3 224 aa19.07■□□□□ 0.64
HOPX-208ENST00000506661 AEBP2Q6ZN18 517 aaPredicted RBP19.05■□□□□ 0.64
HOPX-208ENST00000506661 SLC24A1O60721 1099 aa17.58■□□□□ 0.4
HOPX-208ENST00000506661 PHF23Q9BUL5 403 aaPredicted RBP17.03■□□□□ 0.32
HOPX-208ENST00000506661 EHMT2Q96KQ7 1210 aa16.27■□□□□ 0.2
HOPX-208ENST00000506661 DAXXQ9UER7 740 aaPredicted RBP15.96■□□□□ 0.14
HOPX-208ENST00000506661 PLPPR3Q6T4P5 718 aa15.91■□□□□ 0.14
HOPX-208ENST00000506661 SENP3Q9H4L4 574 aaPredicted RBP15.83■□□□□ 0.12
HOPX-208ENST00000506661 NISCHQ9Y2I1 1504 aa15.81■□□□□ 0.12
HOPX-208ENST00000506661 RTN4Q9NQC3 1192 aaKnown RBP15.79■□□□□ 0.12
HOPX-208ENST00000506661 NCBP3Q53F19 620 aaKnown RBP15.63■□□□□ 0.09
HOPX-208ENST00000506661 MYT1Q01538 1121 aa15.47■□□□□ 0.07
HOPX-208ENST00000506661 TTBK1Q5TCY1 1321 aaPredicted RBP15.39■□□□□ 0.05
HOPX-208ENST00000506661 AMER1Q5JTC6 1135 aaPredicted RBP15.34■□□□□ 0.05
HOPX-208ENST00000506661 PRKCSHP14314 528 aaPredicted RBP15.32■□□□□ 0.04
HOPX-208ENST00000506661 APLP2Q06481 763 aa15.25■□□□□ 0.03
HOPX-208ENST00000506661 PELP1Q8IZL8 1130 aaKnown RBP15.19■□□□□ 0.02
HOPX-208ENST00000506661 KCNA4P22459 653 aa15.18■□□□□ 0.02
HOPX-208ENST00000506661 ERICH6Q7L0X2 663 aa15.08■□□□□ 0
HOPX-208ENST00000506661 CSRNP3Q8WYN3 585 aa15.07■□□□□ 0
HOPX-208ENST00000506661 POTEDQ86YR6 584 aa15.06■□□□□ 0
HOPX-208ENST00000506661 ADRA2BP18089 450 aa15.03■□□□□ -0
HOPX-208ENST00000506661 FOXD1Q16676 465 aa15.03■□□□□ -0
HOPX-208ENST00000506661 ARXQ96QS3 562 aa15.01□□□□□ -0.01
HOPX-208ENST00000506661 TIMELESSQ9UNS1 1208 aa14.94□□□□□ -0.02
HOPX-208ENST00000506661 PPP6R1Q9UPN7 881 aa14.86□□□□□ -0.03
HOPX-208ENST00000506661 TULP1O00294 542 aaPredicted RBP14.69□□□□□ -0.06
HOPX-208ENST00000506661 TAOK2Q9UL54 1235 aa14.65□□□□□ -0.06
HOPX-208ENST00000506661 RANGAP1P46060 587 aaPredicted RBP14.63□□□□□ -0.07
HOPX-208ENST00000506661 HOMEZQ8IX15 550 aa14.53□□□□□ -0.08
HOPX-208ENST00000506661 KLHL34Q8N239 644 aa14.45□□□□□ -0.1
HOPX-208ENST00000506661 TPRNQ4KMQ1 711 aa14.42□□□□□ -0.1
HOPX-208ENST00000506661 BCANQ96GW7 911 aa14.41□□□□□ -0.1
HOPX-208ENST00000506661 EIF5BO60841 1220 aaKnown RBP14.37□□□□□ -0.11
HOPX-208ENST00000506661 PODXL2Q9NZ53 605 aa14.33□□□□□ -0.12
HOPX-208ENST00000506661 SLC4A1APQ9BWU0 796 aaKnown RBP14.2□□□□□ -0.14
HOPX-208ENST00000506661 GTF3C3Q9Y5Q9 886 aa14.18□□□□□ -0.14
HOPX-208ENST00000506661 PLCB2Q00722 1185 aa14.16□□□□□ -0.14
HOPX-208ENST00000506661 MSH5O43196 834 aa14.06□□□□□ -0.16
HOPX-208ENST00000506661 PIAS4Q8N2W9 510 aaPredicted RBP14.05□□□□□ -0.16
HOPX-208ENST00000506661 HAP1P54257 671 aaPredicted RBP14.03□□□□□ -0.16
HOPX-208ENST00000506661 PPP4R3CPQ6ZMV5 832 aa14.03□□□□□ -0.16
HOPX-208ENST00000506661 CCDC180Q9P1Z9 1646 aa14.01□□□□□ -0.17
HOPX-208ENST00000506661 NPM2Q86SE8 214 aaKnown RBP13.99□□□□□ -0.17
HOPX-208ENST00000506661 PLEKHG5O94827 1062 aa13.99□□□□□ -0.17
HOPX-208ENST00000506661 HRCP23327 699 aa13.94□□□□□ -0.18
HOPX-208ENST00000506661 TMEM132AQ24JP5 1023 aa13.86□□□□□ -0.19
HOPX-208ENST00000506661 C14orf37Q86TY3 774 aa13.85□□□□□ -0.19
HOPX-208ENST00000506661 ABCC9O60706 1549 aa13.83□□□□□ -0.2
HOPX-208ENST00000506661 SHROOM4Q9ULL8 1493 aa13.82□□□□□ -0.2
HOPX-208ENST00000506661 BCL11AQ9H165 835 aa13.75□□□□□ -0.21
HOPX-208ENST00000506661 SUPT5HO00267 1087 aaKnown RBP13.73□□□□□ -0.21
HOPX-208ENST00000506661 ZBTB22O15209 634 aa13.73□□□□□ -0.21
HOPX-208ENST00000506661 NPM3O75607 178 aaKnown RBP13.73□□□□□ -0.21
HOPX-208ENST00000506661 MYO15BQ96JP2 1530 aa13.72□□□□□ -0.21
HOPX-208ENST00000506661 FBXO3Q9UK99 471 aa13.7□□□□□ -0.22
HOPX-208ENST00000506661 TRIM26Q12899 539 aaPredicted RBP13.7□□□□□ -0.22
HOPX-208ENST00000506661 VSIG10Q8N0Z9 540 aa13.64□□□□□ -0.23
HOPX-208ENST00000506661 DNAJC5Q9H3Z4 198 aa13.63□□□□□ -0.23
HOPX-208ENST00000506661 PCGF6Q9BYE7 350 aa13.61□□□□□ -0.23
HOPX-208ENST00000506661 PPARGC1BQ86YN6 1023 aaKnown RBP13.61□□□□□ -0.23
HOPX-208ENST00000506661 LOC105371045A0A1W2PR82 267 aa13.58□□□□□ -0.24
HOPX-208ENST00000506661 KDM2AQ9Y2K7 1162 aa13.57□□□□□ -0.24
HOPX-208ENST00000506661 UBTFP17480 764 aaKnown RBP13.5□□□□□ -0.25
HOPX-208ENST00000506661 RB1CC1Q8TDY2 1594 aa13.5□□□□□ -0.25
HOPX-208ENST00000506661 DNAJC5BQ9UF47 199 aa13.49□□□□□ -0.25
HOPX-208ENST00000506661 ZCCHC6Q5VYS8 1495 aaKnown RBP13.47□□□□□ -0.25
HOPX-208ENST00000506661 FKBP8Q14318 412 aa13.47□□□□□ -0.25
HOPX-208ENST00000506661 FBLN2P98095 1184 aa13.46□□□□□ -0.26
HOPX-208ENST00000506661 FAM9AQ8IZU1 332 aaPredicted RBP13.45□□□□□ -0.26
HOPX-208ENST00000506661 DCAF1Q9Y4B6 1507 aa13.44□□□□□ -0.26
HOPX-208ENST00000506661 CNKSR2Q8WXI2 1034 aa13.39□□□□□ -0.27
HOPX-208ENST00000506661 DCAF8L2P0C7V8 631 aa13.37□□□□□ -0.27
HOPX-208ENST00000506661 PDIA4P13667 645 aaKnown RBP13.33□□□□□ -0.28
HOPX-208ENST00000506661 MAPK8IP2Q13387 824 aaPredicted RBP13.31□□□□□ -0.28
HOPX-208ENST00000506661 NACADO15069 1562 aa13.29□□□□□ -0.28
HOPX-208ENST00000506661 CHMP4AQ9BY43 222 aa13.26□□□□□ -0.29
HOPX-208ENST00000506661 SCAF1Q9H7N4 1312 aaKnown RBP13.21□□□□□ -0.3
HOPX-208ENST00000506661 UBE2Q2Q8WVN8 375 aa13.18□□□□□ -0.3
HOPX-208ENST00000506661 SAMD1Q6SPF0 538 aaPredicted RBP13.14□□□□□ -0.31
HOPX-208ENST00000506661 CDK11BP21127 795 aaKnown RBP13.12□□□□□ -0.31
HOPX-208ENST00000506661 CDK11AQ9UQ88 783 aaPredicted RBP13.12□□□□□ -0.31
HOPX-208ENST00000506661 ZEB1P37275 1124 aaPredicted RBP13.1□□□□□ -0.31
HOPX-208ENST00000506661 FOXD4L1Q9NU39 408 aa13.1□□□□□ -0.31
HOPX-208ENST00000506661 CUX2O14529 1486 aa13.1□□□□□ -0.31
HOPX-208ENST00000506661 IGSF3O75054 1194 aa13.08□□□□□ -0.32
HOPX-208ENST00000506661 PDE4CQ08493 712 aa13.06□□□□□ -0.32
HOPX-208ENST00000506661 DHX37Q8IY37 1157 aaKnown RBP13.05□□□□□ -0.32
HOPX-208ENST00000506661 UNC13AQ9UPW8 1703 aa13□□□□□ -0.33
HOPX-208ENST00000506661 BRD2P25440 801 aaKnown RBP12.96□□□□□ -0.34
HOPX-208ENST00000506661 RNF216Q9NWF9 866 aaPredicted RBP12.95□□□□□ -0.34
HOPX-208ENST00000506661 NBR1Q14596 966 aa12.94□□□□□ -0.34
HOPX-208ENST00000506661 CCDC9Q9Y3X0 531 aaKnown RBP12.92□□□□□ -0.34
HOPX-208ENST00000506661 HSP90B1P14625 803 aaKnown RBP12.89□□□□□ -0.35
HOPX-208ENST00000506661 NEFLP07196 543 aa12.88□□□□□ -0.35
HOPX-208ENST00000506661 PAXIP1Q6ZW49 1069 aaPredicted RBP12.88□□□□□ -0.35
HOPX-208ENST00000506661 TAF7LQ5H9L4 462 aa12.87□□□□□ -0.35
HOPX-208ENST00000506661 PKNOX2Q96KN3 472 aa12.87□□□□□ -0.35
HOPX-208ENST00000506661 BICRAQ9NZM4 1560 aa12.86□□□□□ -0.35
HOPX-208ENST00000506661 CFAP44Q96MT7 982 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms