RNA–Protein interactions for RNA: ENST00000506547.5

PRDM8-204, Transcript of PR/SET domain 8, humanhuman

TSL 5

Gene PRDM8, Length 395 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8-204ENST00000506547 AEBP2Q6ZN18 517 aaPredicted RBP23.28■■□□□ 1.32
PRDM8-204ENST00000506547 CHIC1Q5VXU3 224 aa22.07■■□□□ 1.12
PRDM8-204ENST00000506547 SENP3Q9H4L4 574 aaPredicted RBP20.15■□□□□ 0.82
PRDM8-204ENST00000506547 PHF23Q9BUL5 403 aaPredicted RBP19.78■□□□□ 0.76
PRDM8-204ENST00000506547 FOXD1Q16676 465 aa18.64■□□□□ 0.57
PRDM8-204ENST00000506547 MSH5O43196 834 aa17.71■□□□□ 0.43
PRDM8-204ENST00000506547 PLPPR3Q6T4P5 718 aa17.67■□□□□ 0.42
PRDM8-204ENST00000506547 PIAS4Q8N2W9 510 aaPredicted RBP17.52■□□□□ 0.4
PRDM8-204ENST00000506547 POTEDQ86YR6 584 aa17.44■□□□□ 0.38
PRDM8-204ENST00000506547 ADRA2BP18089 450 aa17.24■□□□□ 0.35
PRDM8-204ENST00000506547 PPP6R1Q9UPN7 881 aa17.21■□□□□ 0.35
PRDM8-204ENST00000506547 SCAF1Q9H7N4 1312 aaKnown RBP16.05■□□□□ 0.16
PRDM8-204ENST00000506547 DMRT2Q9Y5R5 561 aa15.86■□□□□ 0.13
PRDM8-204ENST00000506547 MAPK8IP2Q13387 824 aaPredicted RBP15.85■□□□□ 0.13
PRDM8-204ENST00000506547 DCAF8L1A6NGE4 600 aa15.44■□□□□ 0.06
PRDM8-204ENST00000506547 PPP4R3CPQ6ZMV5 832 aa15.4■□□□□ 0.06
PRDM8-204ENST00000506547 CACNB1Q02641 598 aaPredicted RBP15.35■□□□□ 0.05
PRDM8-204ENST00000506547 CNKSR2Q8WXI2 1034 aa15.2■□□□□ 0.02
PRDM8-204ENST00000506547 HOXD11P31277 338 aaPredicted RBP15.17■□□□□ 0.02
PRDM8-204ENST00000506547 RNF216Q9NWF9 866 aaPredicted RBP15.08■□□□□ 0
PRDM8-204ENST00000506547 RNF39Q9H2S5 420 aa14.96□□□□□ -0.01
PRDM8-204ENST00000506547 NCBP3Q53F19 620 aaKnown RBP14.94□□□□□ -0.02
PRDM8-204ENST00000506547 C1QBPQ07021 282 aaKnown RBP14.85□□□□□ -0.03
PRDM8-204ENST00000506547 DNAJC5BQ9UF47 199 aa14.73□□□□□ -0.05
PRDM8-204ENST00000506547 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.66□□□□□ -0.06
PRDM8-204ENST00000506547 NPM3O75607 178 aaKnown RBP14.48□□□□□ -0.09
PRDM8-204ENST00000506547 CAPN15O75808 1086 aa14.15□□□□□ -0.14
PRDM8-204ENST00000506547 U3KPZ7 1027 aaPredicted RBP14.11□□□□□ -0.15
PRDM8-204ENST00000506547 APLP2Q06481 763 aa14.06□□□□□ -0.16
PRDM8-204ENST00000506547 KCNA4P22459 653 aa14.02□□□□□ -0.17
PRDM8-204ENST00000506547 SPINK5Q9NQ38 1064 aaPredicted RBP13.98□□□□□ -0.17
PRDM8-204ENST00000506547 DSG3P32926 999 aa13.95□□□□□ -0.18
PRDM8-204ENST00000506547 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.94□□□□□ -0.18
PRDM8-204ENST00000506547 HNRNPUL2Q1KMD3 747 aaKnown RBP13.94□□□□□ -0.18
PRDM8-204ENST00000506547 TRHP20396 242 aaPredicted RBP13.87□□□□□ -0.19
PRDM8-204ENST00000506547 ZNF219Q9P2Y4 722 aaPredicted RBP13.86□□□□□ -0.19
PRDM8-204ENST00000506547 SLC4A2P04920 1241 aa13.79□□□□□ -0.2
PRDM8-204ENST00000506547 SAMD1Q6SPF0 538 aaPredicted RBP13.78□□□□□ -0.2
PRDM8-204ENST00000506547 ABCB7O75027 752 aa13.71□□□□□ -0.21
PRDM8-204ENST00000506547 POTEHQ6S545 545 aa13.71□□□□□ -0.21
PRDM8-204ENST00000506547 MYCNP04198 464 aaPredicted RBP13.52□□□□□ -0.25
PRDM8-204ENST00000506547 RBM42Q9BTD8 480 aaKnown RBP13.52□□□□□ -0.25
PRDM8-204ENST00000506547 POLA2Q14181 598 aa13.4□□□□□ -0.26
PRDM8-204ENST00000506547 SLC4A1APQ9BWU0 796 aaKnown RBP13.33□□□□□ -0.28
PRDM8-204ENST00000506547 ZBTB12Q9Y330 459 aaPredicted RBP13.25□□□□□ -0.29
PRDM8-204ENST00000506547 FOXD4L1Q9NU39 408 aa13.24□□□□□ -0.29
PRDM8-204ENST00000506547 CHRDL2Q6WN34 429 aa13.19□□□□□ -0.3
PRDM8-204ENST00000506547 AKT1S1Q96B36 256 aa13.08□□□□□ -0.32
PRDM8-204ENST00000506547 ATF5Q9Y2D1 282 aaPredicted RBP13.01□□□□□ -0.33
PRDM8-204ENST00000506547 OSCARQ8IYS5 282 aa12.93□□□□□ -0.34
PRDM8-204ENST00000506547 REM2Q8IYK8 340 aaPredicted RBP12.9□□□□□ -0.34
PRDM8-204ENST00000506547 ATXN8OSP0DMR3 200 aa12.89□□□□□ -0.35
PRDM8-204ENST00000506547 FBLN2P98095 1184 aa12.85□□□□□ -0.35
PRDM8-204ENST00000506547 SP7Q8TDD2 431 aaPredicted RBP12.78□□□□□ -0.36
PRDM8-204ENST00000506547 PIP4P2Q8N4L2 257 aa12.77□□□□□ -0.37
PRDM8-204ENST00000506547 ZBTB22O15209 634 aa12.76□□□□□ -0.37
PRDM8-204ENST00000506547 HAX1O00165 279 aa12.75□□□□□ -0.37
PRDM8-204ENST00000506547 PITPNM1O00562 1244 aa12.73□□□□□ -0.37
PRDM8-204ENST00000506547 SPDYE2BA6NHP3 402 aa12.72□□□□□ -0.37
PRDM8-204ENST00000506547 SPDYE6P0CI01 402 aa12.72□□□□□ -0.37
PRDM8-204ENST00000506547 SPDYE2Q495Y8 402 aa12.72□□□□□ -0.37
PRDM8-204ENST00000506547 FXR2P51116 673 aaKnown RBP eCLIP12.64□□□□□ -0.39
PRDM8-204ENST00000506547 CLEC11AQ9Y240 323 aa12.61□□□□□ -0.39
PRDM8-204ENST00000506547 SPDYE1Q8NFV5 336 aaPredicted RBP12.59□□□□□ -0.39
PRDM8-204ENST00000506547 ZNF692Q9BU19 519 aaPredicted RBP12.58□□□□□ -0.4
PRDM8-204ENST00000506547 PRKAR2AP13861 404 aaKnown RBP12.49□□□□□ -0.41
PRDM8-204ENST00000506547 MKRN4PQ13434 485 aaPredicted RBP12.4□□□□□ -0.42
PRDM8-204ENST00000506547 SSUH2Q9Y2M2 353 aa12.4□□□□□ -0.42
PRDM8-204ENST00000506547 PRR29P0C7W0 189 aa12.37□□□□□ -0.43
PRDM8-204ENST00000506547 PABPN1Q86U42 306 aaKnown RBP eCLIP12.34□□□□□ -0.43
PRDM8-204ENST00000506547 EVX2Q03828 476 aa12.29□□□□□ -0.44
PRDM8-204ENST00000506547 C19orf67A6NJJ6 358 aa12.25□□□□□ -0.45
PRDM8-204ENST00000506547 CHADLQ6NUI6 762 aa12.24□□□□□ -0.45
PRDM8-204ENST00000506547 GABBR2O75899 941 aa12.15□□□□□ -0.46
PRDM8-204ENST00000506547 CD44P16070 742 aaKnown RBP12.09□□□□□ -0.47
PRDM8-204ENST00000506547 CSRNP3Q8WYN3 585 aa12.09□□□□□ -0.47
PRDM8-204ENST00000506547 STAG3Q9UJ98 1225 aa12.08□□□□□ -0.48
PRDM8-204ENST00000506547 FARP1Q9Y4F1 1045 aaPredicted RBP12.08□□□□□ -0.48
PRDM8-204ENST00000506547 CLCN6P51797 869 aa12.07□□□□□ -0.48
PRDM8-204ENST00000506547 LHX8Q68G74 356 aa12.01□□□□□ -0.49
PRDM8-204ENST00000506547 EHMT2Q96KQ7 1210 aa11.99□□□□□ -0.49
PRDM8-204ENST00000506547 DCBLD2Q96PD2 775 aa11.96□□□□□ -0.49
PRDM8-204ENST00000506547 PAK3O75914 559 aaPredicted RBP11.94□□□□□ -0.5
PRDM8-204ENST00000506547 SPDYE4A6NLX3 237 aa11.93□□□□□ -0.5
PRDM8-204ENST00000506547 ZRANB1Q9UGI0 708 aa11.91□□□□□ -0.5
PRDM8-204ENST00000506547 NPM1P06748 294 aaKnown RBP eCLIP11.85□□□□□ -0.51
PRDM8-204ENST00000506547 CREBZFQ9NS37 354 aa11.83□□□□□ -0.52
PRDM8-204ENST00000506547 ZNF579Q8NAF0 562 aaKnown RBP11.82□□□□□ -0.52
PRDM8-204ENST00000506547 POTEIP0CG38 1075 aa11.74□□□□□ -0.53
PRDM8-204ENST00000506547 PLEKHG5O94827 1062 aa11.68□□□□□ -0.54
PRDM8-204ENST00000506547 GALR2O43603 387 aaPredicted RBP11.66□□□□□ -0.54
PRDM8-204ENST00000506547 PHF12Q96QT6 1004 aa11.63□□□□□ -0.55
PRDM8-204ENST00000506547 TSPYL2Q9H2G4 693 aaPredicted RBP11.54□□□□□ -0.56
PRDM8-204ENST00000506547 MNX1P50219 401 aaPredicted RBP11.52□□□□□ -0.57
PRDM8-204ENST00000506547 MIER1Q8N108 512 aa11.5□□□□□ -0.57
PRDM8-204ENST00000506547 PLSCR2Q9NRY7 297 aa11.49□□□□□ -0.57
PRDM8-204ENST00000506547 C7P10643 843 aa11.47□□□□□ -0.57
PRDM8-204ENST00000506547 SLC39A7Q92504 469 aa11.47□□□□□ -0.57
PRDM8-204ENST00000506547 MS4A3Q96HJ5 214 aa11.46□□□□□ -0.57
PRDM8-204ENST00000506547 MAMSTRQ6ZN01 415 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms