RNA–Protein interactions for RNA: ENST00000506279.1

LVRN-206, Transcript of laeverin, humanhuman

TSL 4

Gene LVRN, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LVRN-206ENST00000506279 AEBP2Q6ZN18 517 aaPredicted RBP24.6■■□□□ 1.53
LVRN-206ENST00000506279 CHIC1Q5VXU3 224 aa23.52■■□□□ 1.36
LVRN-206ENST00000506279 SENP3Q9H4L4 574 aaPredicted RBP20.93■□□□□ 0.94
LVRN-206ENST00000506279 PHF23Q9BUL5 403 aaPredicted RBP20.7■□□□□ 0.9
LVRN-206ENST00000506279 FOXD1Q16676 465 aa19.5■□□□□ 0.71
LVRN-206ENST00000506279 PLPPR3Q6T4P5 718 aa18.89■□□□□ 0.61
LVRN-206ENST00000506279 PPP6R1Q9UPN7 881 aa18.4■□□□□ 0.54
LVRN-206ENST00000506279 ADRA2BP18089 450 aa18.37■□□□□ 0.53
LVRN-206ENST00000506279 PIAS4Q8N2W9 510 aaPredicted RBP18.31■□□□□ 0.52
LVRN-206ENST00000506279 MSH5O43196 834 aa18.15■□□□□ 0.5
LVRN-206ENST00000506279 POTEDQ86YR6 584 aa17.42■□□□□ 0.38
LVRN-206ENST00000506279 MAPK8IP2Q13387 824 aaPredicted RBP16.82■□□□□ 0.28
LVRN-206ENST00000506279 SCAF1Q9H7N4 1312 aaKnown RBP16.75■□□□□ 0.27
LVRN-206ENST00000506279 DMRT2Q9Y5R5 561 aa16.62■□□□□ 0.25
LVRN-206ENST00000506279 PPP4R3CPQ6ZMV5 832 aa16.6■□□□□ 0.25
LVRN-206ENST00000506279 CNKSR2Q8WXI2 1034 aa16.22■□□□□ 0.19
LVRN-206ENST00000506279 HOXD11P31277 338 aaPredicted RBP16.06■□□□□ 0.16
LVRN-206ENST00000506279 DCAF8L1A6NGE4 600 aa16.04■□□□□ 0.16
LVRN-206ENST00000506279 NCBP3Q53F19 620 aaKnown RBP16.01■□□□□ 0.15
LVRN-206ENST00000506279 RNF216Q9NWF9 866 aaPredicted RBP16.01■□□□□ 0.15
LVRN-206ENST00000506279 NPM3O75607 178 aaKnown RBP15.79■□□□□ 0.12
LVRN-206ENST00000506279 KCNA4P22459 653 aa15.69■□□□□ 0.1
LVRN-206ENST00000506279 CACNB1Q02641 598 aaPredicted RBP15.51■□□□□ 0.07
LVRN-206ENST00000506279 RNF39Q9H2S5 420 aa15.51■□□□□ 0.07
LVRN-206ENST00000506279 DNAJC5BQ9UF47 199 aa15.4■□□□□ 0.06
LVRN-206ENST00000506279 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.38■□□□□ 0.05
LVRN-206ENST00000506279 C1QBPQ07021 282 aaKnown RBP15.28■□□□□ 0.04
LVRN-206ENST00000506279 U3KPZ7 1027 aaPredicted RBP15.05■□□□□ -0
LVRN-206ENST00000506279 SLC4A2P04920 1241 aa15.02■□□□□ -0
LVRN-206ENST00000506279 SLC4A1APQ9BWU0 796 aaKnown RBP14.85□□□□□ -0.03
LVRN-206ENST00000506279 SPINK5Q9NQ38 1064 aaPredicted RBP14.8□□□□□ -0.04
LVRN-206ENST00000506279 CAPN15O75808 1086 aa14.79□□□□□ -0.04
LVRN-206ENST00000506279 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.67□□□□□ -0.06
LVRN-206ENST00000506279 HNRNPUL2Q1KMD3 747 aaKnown RBP14.67□□□□□ -0.06
LVRN-206ENST00000506279 APLP2Q06481 763 aa14.62□□□□□ -0.07
LVRN-206ENST00000506279 TRHP20396 242 aaPredicted RBP14.61□□□□□ -0.07
LVRN-206ENST00000506279 SAMD1Q6SPF0 538 aaPredicted RBP14.61□□□□□ -0.07
LVRN-206ENST00000506279 DSG3P32926 999 aa14.6□□□□□ -0.07
LVRN-206ENST00000506279 MYCNP04198 464 aaPredicted RBP14.59□□□□□ -0.07
LVRN-206ENST00000506279 FOXD4L1Q9NU39 408 aa14.55□□□□□ -0.08
LVRN-206ENST00000506279 ZNF219Q9P2Y4 722 aaPredicted RBP14.52□□□□□ -0.09
LVRN-206ENST00000506279 ABCB7O75027 752 aa14.49□□□□□ -0.09
LVRN-206ENST00000506279 ZBTB22O15209 634 aa14.42□□□□□ -0.1
LVRN-206ENST00000506279 ATF5Q9Y2D1 282 aaPredicted RBP14.27□□□□□ -0.13
LVRN-206ENST00000506279 POLA2Q14181 598 aa14.23□□□□□ -0.13
LVRN-206ENST00000506279 ATXN8OSP0DMR3 200 aa14.03□□□□□ -0.16
LVRN-206ENST00000506279 EHMT2Q96KQ7 1210 aa13.94□□□□□ -0.18
LVRN-206ENST00000506279 CSRNP3Q8WYN3 585 aa13.92□□□□□ -0.18
LVRN-206ENST00000506279 RBM42Q9BTD8 480 aaKnown RBP13.92□□□□□ -0.18
LVRN-206ENST00000506279 ZBTB12Q9Y330 459 aaPredicted RBP13.91□□□□□ -0.18
LVRN-206ENST00000506279 OSCARQ8IYS5 282 aa13.79□□□□□ -0.2
LVRN-206ENST00000506279 FBLN2P98095 1184 aa13.69□□□□□ -0.22
LVRN-206ENST00000506279 POTEHQ6S545 545 aa13.69□□□□□ -0.22
LVRN-206ENST00000506279 AKT1S1Q96B36 256 aa13.63□□□□□ -0.23
LVRN-206ENST00000506279 MKRN4PQ13434 485 aaPredicted RBP13.6□□□□□ -0.23
LVRN-206ENST00000506279 CHRDL2Q6WN34 429 aa13.56□□□□□ -0.24
LVRN-206ENST00000506279 REM2Q8IYK8 340 aaPredicted RBP13.53□□□□□ -0.24
LVRN-206ENST00000506279 SPDYE2BA6NHP3 402 aa13.5□□□□□ -0.25
LVRN-206ENST00000506279 SPDYE6P0CI01 402 aa13.5□□□□□ -0.25
LVRN-206ENST00000506279 SPDYE2Q495Y8 402 aa13.5□□□□□ -0.25
LVRN-206ENST00000506279 ZNF692Q9BU19 519 aaPredicted RBP13.41□□□□□ -0.26
LVRN-206ENST00000506279 PITPNM1O00562 1244 aa13.4□□□□□ -0.26
LVRN-206ENST00000506279 SSUH2Q9Y2M2 353 aa13.34□□□□□ -0.27
LVRN-206ENST00000506279 PIP4P2Q8N4L2 257 aa13.28□□□□□ -0.28
LVRN-206ENST00000506279 CLEC11AQ9Y240 323 aa13.27□□□□□ -0.29
LVRN-206ENST00000506279 SPDYE1Q8NFV5 336 aaPredicted RBP13.24□□□□□ -0.29
LVRN-206ENST00000506279 PABPN1Q86U42 306 aaKnown RBP eCLIP13.23□□□□□ -0.29
LVRN-206ENST00000506279 FXR2P51116 673 aaKnown RBP eCLIP13.21□□□□□ -0.29
LVRN-206ENST00000506279 SPDYE4A6NLX3 237 aa13.08□□□□□ -0.32
LVRN-206ENST00000506279 PRKAR2AP13861 404 aaKnown RBP13.07□□□□□ -0.32
LVRN-206ENST00000506279 PRR29P0C7W0 189 aa13.04□□□□□ -0.32
LVRN-206ENST00000506279 HAX1O00165 279 aa13.02□□□□□ -0.33
LVRN-206ENST00000506279 CHADLQ6NUI6 762 aa12.99□□□□□ -0.33
LVRN-206ENST00000506279 SP7Q8TDD2 431 aaPredicted RBP12.92□□□□□ -0.34
LVRN-206ENST00000506279 STAG3Q9UJ98 1225 aa12.86□□□□□ -0.35
LVRN-206ENST00000506279 EVX2Q03828 476 aa12.85□□□□□ -0.35
LVRN-206ENST00000506279 C19orf67A6NJJ6 358 aa12.77□□□□□ -0.37
LVRN-206ENST00000506279 FARP1Q9Y4F1 1045 aaPredicted RBP12.77□□□□□ -0.37
LVRN-206ENST00000506279 CREBZFQ9NS37 354 aa12.74□□□□□ -0.37
LVRN-206ENST00000506279 PROM2Q8N271 834 aa12.72□□□□□ -0.37
LVRN-206ENST00000506279 CD44P16070 742 aaKnown RBP12.66□□□□□ -0.38
LVRN-206ENST00000506279 FKBP8Q14318 412 aa12.66□□□□□ -0.38
LVRN-206ENST00000506279 GABBR2O75899 941 aa12.56□□□□□ -0.4
LVRN-206ENST00000506279 ZRANB1Q9UGI0 708 aa12.53□□□□□ -0.4
LVRN-206ENST00000506279 MNX1P50219 401 aaPredicted RBP12.52□□□□□ -0.41
LVRN-206ENST00000506279 NPM1P06748 294 aaKnown RBP eCLIP12.51□□□□□ -0.41
LVRN-206ENST00000506279 MIER1Q8N108 512 aa12.47□□□□□ -0.41
LVRN-206ENST00000506279 PAK3O75914 559 aaPredicted RBP12.45□□□□□ -0.42
LVRN-206ENST00000506279 ZNF579Q8NAF0 562 aaKnown RBP12.44□□□□□ -0.42
LVRN-206ENST00000506279 PLEKHG5O94827 1062 aa12.43□□□□□ -0.42
LVRN-206ENST00000506279 PLCD3Q8N3E9 789 aa12.41□□□□□ -0.42
LVRN-206ENST00000506279 PHF12Q96QT6 1004 aa12.38□□□□□ -0.43
LVRN-206ENST00000506279 CLCN6P51797 869 aa12.35□□□□□ -0.43
LVRN-206ENST00000506279 TSPYL2Q9H2G4 693 aaPredicted RBP12.35□□□□□ -0.43
LVRN-206ENST00000506279 GALR2O43603 387 aaPredicted RBP12.32□□□□□ -0.44
LVRN-206ENST00000506279 POTEIP0CG38 1075 aa12.29□□□□□ -0.44
LVRN-206ENST00000506279 DCBLD2Q96PD2 775 aa12.29□□□□□ -0.44
LVRN-206ENST00000506279 FBXO3Q9UK99 471 aa12.28□□□□□ -0.44
LVRN-206ENST00000506279 RASEFQ8IZ41 740 aa12.25□□□□□ -0.45
LVRN-206ENST00000506279 ZBTB47Q9UFB7 747 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms