RNA–Protein interactions for RNA: ENST00000506257.1

SV2C-203, Transcript of synaptic vesicle glycoprotein 2C, humanhuman

TSL 3

Gene SV2C, Length 437 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2C-203ENST00000506257 AEBP2Q6ZN18 517 aaPredicted RBP28.36■■■□□ 2.13
SV2C-203ENST00000506257 CHIC1Q5VXU3 224 aa27.37■■□□□ 1.97
SV2C-203ENST00000506257 SENP3Q9H4L4 574 aaPredicted RBP24.18■■□□□ 1.46
SV2C-203ENST00000506257 PHF23Q9BUL5 403 aaPredicted RBP24■■□□□ 1.43
SV2C-203ENST00000506257 FOXD1Q16676 465 aa22.45■■□□□ 1.18
SV2C-203ENST00000506257 PLPPR3Q6T4P5 718 aa22.09■■□□□ 1.13
SV2C-203ENST00000506257 PPP6R1Q9UPN7 881 aa21.31■■□□□ 1
SV2C-203ENST00000506257 ADRA2BP18089 450 aa21.28■■□□□ 1
SV2C-203ENST00000506257 PIAS4Q8N2W9 510 aaPredicted RBP21.1■□□□□ 0.97
SV2C-203ENST00000506257 MSH5O43196 834 aa20.89■□□□□ 0.93
SV2C-203ENST00000506257 POTEDQ86YR6 584 aa19.64■□□□□ 0.73
SV2C-203ENST00000506257 SCAF1Q9H7N4 1312 aaKnown RBP19.53■□□□□ 0.72
SV2C-203ENST00000506257 MAPK8IP2Q13387 824 aaPredicted RBP19.42■□□□□ 0.7
SV2C-203ENST00000506257 PPP4R3CPQ6ZMV5 832 aa19.4■□□□□ 0.7
SV2C-203ENST00000506257 DMRT2Q9Y5R5 561 aa19.22■□□□□ 0.67
SV2C-203ENST00000506257 CNKSR2Q8WXI2 1034 aa18.96■□□□□ 0.63
SV2C-203ENST00000506257 NCBP3Q53F19 620 aaKnown RBP18.83■□□□□ 0.6
SV2C-203ENST00000506257 HOXD11P31277 338 aaPredicted RBP18.68■□□□□ 0.58
SV2C-203ENST00000506257 RNF216Q9NWF9 866 aaPredicted RBP18.67■□□□□ 0.58
SV2C-203ENST00000506257 KCNA4P22459 653 aa18.51■□□□□ 0.55
SV2C-203ENST00000506257 NPM3O75607 178 aaKnown RBP18.5■□□□□ 0.55
SV2C-203ENST00000506257 DCAF8L1A6NGE4 600 aa18.45■□□□□ 0.54
SV2C-203ENST00000506257 DNAJC5BQ9UF47 199 aa18.01■□□□□ 0.47
SV2C-203ENST00000506257 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.84■□□□□ 0.45
SV2C-203ENST00000506257 RNF39Q9H2S5 420 aa17.83■□□□□ 0.44
SV2C-203ENST00000506257 CACNB1Q02641 598 aaPredicted RBP17.68■□□□□ 0.42
SV2C-203ENST00000506257 C1QBPQ07021 282 aaKnown RBP17.64■□□□□ 0.41
SV2C-203ENST00000506257 SLC4A1APQ9BWU0 796 aaKnown RBP17.59■□□□□ 0.41
SV2C-203ENST00000506257 SLC4A2P04920 1241 aa17.54■□□□□ 0.4
SV2C-203ENST00000506257 U3KPZ7 1027 aaPredicted RBP17.46■□□□□ 0.39
SV2C-203ENST00000506257 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.18■□□□□ 0.34
SV2C-203ENST00000506257 HNRNPUL2Q1KMD3 747 aaKnown RBP17.18■□□□□ 0.34
SV2C-203ENST00000506257 FOXD4L1Q9NU39 408 aa17.17■□□□□ 0.34
SV2C-203ENST00000506257 MYCNP04198 464 aaPredicted RBP17.12■□□□□ 0.33
SV2C-203ENST00000506257 APLP2Q06481 763 aa17.1■□□□□ 0.33
SV2C-203ENST00000506257 SAMD1Q6SPF0 538 aaPredicted RBP17.09■□□□□ 0.33
SV2C-203ENST00000506257 SPINK5Q9NQ38 1064 aaPredicted RBP17.09■□□□□ 0.33
SV2C-203ENST00000506257 CAPN15O75808 1086 aa17.07■□□□□ 0.32
SV2C-203ENST00000506257 ZBTB22O15209 634 aa16.99■□□□□ 0.31
SV2C-203ENST00000506257 TRHP20396 242 aaPredicted RBP16.91■□□□□ 0.3
SV2C-203ENST00000506257 ZNF219Q9P2Y4 722 aaPredicted RBP16.89■□□□□ 0.29
SV2C-203ENST00000506257 DSG3P32926 999 aa16.85■□□□□ 0.29
SV2C-203ENST00000506257 ABCB7O75027 752 aa16.69■□□□□ 0.26
SV2C-203ENST00000506257 ATF5Q9Y2D1 282 aaPredicted RBP16.65■□□□□ 0.26
SV2C-203ENST00000506257 EHMT2Q96KQ7 1210 aa16.64■□□□□ 0.25
SV2C-203ENST00000506257 CSRNP3Q8WYN3 585 aa16.63■□□□□ 0.25
SV2C-203ENST00000506257 ATXN8OSP0DMR3 200 aa16.61■□□□□ 0.25
SV2C-203ENST00000506257 POLA2Q14181 598 aa16.54■□□□□ 0.24
SV2C-203ENST00000506257 ZBTB12Q9Y330 459 aaPredicted RBP16.26■□□□□ 0.19
SV2C-203ENST00000506257 RBM42Q9BTD8 480 aaKnown RBP16.11■□□□□ 0.17
SV2C-203ENST00000506257 FBLN2P98095 1184 aa16.05■□□□□ 0.16
SV2C-203ENST00000506257 OSCARQ8IYS5 282 aa15.97■□□□□ 0.15
SV2C-203ENST00000506257 MKRN4PQ13434 485 aaPredicted RBP15.9■□□□□ 0.14
SV2C-203ENST00000506257 AKT1S1Q96B36 256 aa15.82■□□□□ 0.12
SV2C-203ENST00000506257 SPDYE2BA6NHP3 402 aa15.78■□□□□ 0.12
SV2C-203ENST00000506257 SPDYE6P0CI01 402 aa15.78■□□□□ 0.12
SV2C-203ENST00000506257 SPDYE2Q495Y8 402 aa15.78■□□□□ 0.12
SV2C-203ENST00000506257 ZNF692Q9BU19 519 aaPredicted RBP15.68■□□□□ 0.1
SV2C-203ENST00000506257 REM2Q8IYK8 340 aaPredicted RBP15.65■□□□□ 0.1
SV2C-203ENST00000506257 SSUH2Q9Y2M2 353 aa15.58■□□□□ 0.08
SV2C-203ENST00000506257 CHRDL2Q6WN34 429 aa15.56■□□□□ 0.08
SV2C-203ENST00000506257 POTEHQ6S545 545 aa15.5■□□□□ 0.07
SV2C-203ENST00000506257 PITPNM1O00562 1244 aa15.46■□□□□ 0.07
SV2C-203ENST00000506257 PABPN1Q86U42 306 aaKnown RBP eCLIP15.44■□□□□ 0.06
SV2C-203ENST00000506257 SPDYE4A6NLX3 237 aa15.42■□□□□ 0.06
SV2C-203ENST00000506257 SPDYE1Q8NFV5 336 aaPredicted RBP15.42■□□□□ 0.06
SV2C-203ENST00000506257 CLEC11AQ9Y240 323 aa15.36■□□□□ 0.05
SV2C-203ENST00000506257 PIP4P2Q8N4L2 257 aa15.27■□□□□ 0.04
SV2C-203ENST00000506257 FXR2P51116 673 aaKnown RBP eCLIP15.26■□□□□ 0.03
SV2C-203ENST00000506257 PRR29P0C7W0 189 aa15.18■□□□□ 0.02
SV2C-203ENST00000506257 STAG3Q9UJ98 1225 aa15.14■□□□□ 0.01
SV2C-203ENST00000506257 PRKAR2AP13861 404 aaKnown RBP15.09■□□□□ 0.01
SV2C-203ENST00000506257 FKBP8Q14318 412 aa15.08■□□□□ 0
SV2C-203ENST00000506257 PROM2Q8N271 834 aa15.07■□□□□ 0
SV2C-203ENST00000506257 CHADLQ6NUI6 762 aa14.99□□□□□ -0.01
SV2C-203ENST00000506257 HAX1O00165 279 aa14.92□□□□□ -0.02
SV2C-203ENST00000506257 CREBZFQ9NS37 354 aa14.86□□□□□ -0.03
SV2C-203ENST00000506257 FARP1Q9Y4F1 1045 aaPredicted RBP14.83□□□□□ -0.04
SV2C-203ENST00000506257 C19orf67A6NJJ6 358 aa14.74□□□□□ -0.05
SV2C-203ENST00000506257 SP7Q8TDD2 431 aaPredicted RBP14.72□□□□□ -0.05
SV2C-203ENST00000506257 EVX2Q03828 476 aa14.71□□□□□ -0.05
SV2C-203ENST00000506257 MIER1Q8N108 512 aa14.69□□□□□ -0.06
SV2C-203ENST00000506257 PLEKHG5O94827 1062 aa14.68□□□□□ -0.06
SV2C-203ENST00000506257 FBXO3Q9UK99 471 aa14.68□□□□□ -0.06
SV2C-203ENST00000506257 NPM1P06748 294 aaKnown RBP eCLIP14.66□□□□□ -0.06
SV2C-203ENST00000506257 CD44P16070 742 aaKnown RBP14.63□□□□□ -0.07
SV2C-203ENST00000506257 MNX1P50219 401 aaPredicted RBP14.63□□□□□ -0.07
SV2C-203ENST00000506257 PLCD3Q8N3E9 789 aa14.62□□□□□ -0.07
SV2C-203ENST00000506257 PAK3O75914 559 aaPredicted RBP14.51□□□□□ -0.09
SV2C-203ENST00000506257 ZRANB1Q9UGI0 708 aa14.51□□□□□ -0.09
SV2C-203ENST00000506257 ZBTB47Q9UFB7 747 aaPredicted RBP14.5□□□□□ -0.09
SV2C-203ENST00000506257 VASPP50552 380 aaPredicted RBP14.44□□□□□ -0.1
SV2C-203ENST00000506257 GABBR2O75899 941 aa14.43□□□□□ -0.1
SV2C-203ENST00000506257 ZNF579Q8NAF0 562 aaKnown RBP14.42□□□□□ -0.1
SV2C-203ENST00000506257 CLCN6P51797 869 aa14.4□□□□□ -0.1
SV2C-203ENST00000506257 TSPYL2Q9H2G4 693 aaPredicted RBP14.38□□□□□ -0.11
SV2C-203ENST00000506257 KLHL34Q8N239 644 aa14.33□□□□□ -0.12
SV2C-203ENST00000506257 RASEFQ8IZ41 740 aa14.32□□□□□ -0.12
SV2C-203ENST00000506257 NUBP1P53384 320 aa14.3□□□□□ -0.12
SV2C-203ENST00000506257 PHF12Q96QT6 1004 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms