RNA–Protein interactions for RNA: ENST00000506214.1

TMA16-203, Transcript of translation machinery associated 16 homolog, humanhuman

TSL 2

Gene TMA16, Length 843 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMA16-203ENST00000506214 AEBP2Q6ZN18 517 aaPredicted RBP30.79■■■□□ 2.52
TMA16-203ENST00000506214 CHIC1Q5VXU3 224 aa28.94■■■□□ 2.22
TMA16-203ENST00000506214 SENP3Q9H4L4 574 aaPredicted RBP26.17■■□□□ 1.78
TMA16-203ENST00000506214 PHF23Q9BUL5 403 aaPredicted RBP25.82■■□□□ 1.72
TMA16-203ENST00000506214 FOXD1Q16676 465 aa24.49■■□□□ 1.51
TMA16-203ENST00000506214 PLPPR3Q6T4P5 718 aa22.95■■□□□ 1.26
TMA16-203ENST00000506214 MSH5O43196 834 aa22.92■■□□□ 1.26
TMA16-203ENST00000506214 POTEDQ86YR6 584 aa22.84■■□□□ 1.25
TMA16-203ENST00000506214 PIAS4Q8N2W9 510 aaPredicted RBP22.76■■□□□ 1.23
TMA16-203ENST00000506214 PPP6R1Q9UPN7 881 aa22.76■■□□□ 1.23
TMA16-203ENST00000506214 ADRA2BP18089 450 aa22.62■■□□□ 1.21
TMA16-203ENST00000506214 MAPK8IP2Q13387 824 aaPredicted RBP20.86■□□□□ 0.93
TMA16-203ENST00000506214 DMRT2Q9Y5R5 561 aa20.76■□□□□ 0.91
TMA16-203ENST00000506214 SCAF1Q9H7N4 1312 aaKnown RBP20.56■□□□□ 0.88
TMA16-203ENST00000506214 PPP4R3CPQ6ZMV5 832 aa20.12■□□□□ 0.81
TMA16-203ENST00000506214 HOXD11P31277 338 aaPredicted RBP19.93■□□□□ 0.78
TMA16-203ENST00000506214 DCAF8L1A6NGE4 600 aa19.78■□□□□ 0.76
TMA16-203ENST00000506214 CACNB1Q02641 598 aaPredicted RBP19.78■□□□□ 0.76
TMA16-203ENST00000506214 CNKSR2Q8WXI2 1034 aa19.77■□□□□ 0.76
TMA16-203ENST00000506214 RNF216Q9NWF9 866 aaPredicted RBP19.68■□□□□ 0.74
TMA16-203ENST00000506214 RNF39Q9H2S5 420 aa19.61■□□□□ 0.73
TMA16-203ENST00000506214 DNAJC5BQ9UF47 199 aa19.28■□□□□ 0.68
TMA16-203ENST00000506214 C1QBPQ07021 282 aaKnown RBP19.25■□□□□ 0.67
TMA16-203ENST00000506214 NCBP3Q53F19 620 aaKnown RBP19.18■□□□□ 0.66
TMA16-203ENST00000506214 NPM3O75607 178 aaKnown RBP19.03■□□□□ 0.64
TMA16-203ENST00000506214 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.86■□□□□ 0.616e-6■■■□□ 15.7
TMA16-203ENST00000506214 KCNA4P22459 653 aa18.61■□□□□ 0.57
TMA16-203ENST00000506214 U3KPZ7 1027 aaPredicted RBP18.56■□□□□ 0.56
TMA16-203ENST00000506214 SPINK5Q9NQ38 1064 aaPredicted RBP18.35■□□□□ 0.53
TMA16-203ENST00000506214 SLC4A2P04920 1241 aa18.28■□□□□ 0.52
TMA16-203ENST00000506214 DSG3P32926 999 aa18.28■□□□□ 0.52
TMA16-203ENST00000506214 CAPN15O75808 1086 aa18.23■□□□□ 0.51
TMA16-203ENST00000506214 SLC4A1APQ9BWU0 796 aaKnown RBP17.93■□□□□ 0.46
TMA16-203ENST00000506214 TRHP20396 242 aaPredicted RBP17.89■□□□□ 0.45
TMA16-203ENST00000506214 ZNF219Q9P2Y4 722 aaPredicted RBP17.86■□□□□ 0.45
TMA16-203ENST00000506214 APLP2Q06481 763 aa17.84■□□□□ 0.45
TMA16-203ENST00000506214 ABCB7O75027 752 aa17.83■□□□□ 0.44
TMA16-203ENST00000506214 POTEHQ6S545 545 aa17.82■□□□□ 0.44
TMA16-203ENST00000506214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.81■□□□□ 0.44
TMA16-203ENST00000506214 HNRNPUL2Q1KMD3 747 aaKnown RBP17.81■□□□□ 0.44
TMA16-203ENST00000506214 SAMD1Q6SPF0 538 aaPredicted RBP17.74■□□□□ 0.43
TMA16-203ENST00000506214 MYCNP04198 464 aaPredicted RBP17.55■□□□□ 0.4
TMA16-203ENST00000506214 POLA2Q14181 598 aa17.39■□□□□ 0.37
TMA16-203ENST00000506214 EHMT2Q96KQ7 1210 aa17.39■□□□□ 0.37
TMA16-203ENST00000506214 RBM42Q9BTD8 480 aaKnown RBP17.35■□□□□ 0.37
TMA16-203ENST00000506214 FOXD4L1Q9NU39 408 aa17.31■□□□□ 0.36
TMA16-203ENST00000506214 ATF5Q9Y2D1 282 aaPredicted RBP17.27■□□□□ 0.36
TMA16-203ENST00000506214 CHRDL2Q6WN34 429 aa17.12■□□□□ 0.33
TMA16-203ENST00000506214 CSRNP3Q8WYN3 585 aa17.09■□□□□ 0.33
TMA16-203ENST00000506214 ZBTB22O15209 634 aa17.04■□□□□ 0.32
TMA16-203ENST00000506214 ZBTB12Q9Y330 459 aaPredicted RBP16.97■□□□□ 0.31
TMA16-203ENST00000506214 AKT1S1Q96B36 256 aa16.94■□□□□ 0.3
TMA16-203ENST00000506214 OSCARQ8IYS5 282 aa16.88■□□□□ 0.29
TMA16-203ENST00000506214 ATXN8OSP0DMR3 200 aa16.83■□□□□ 0.28
TMA16-203ENST00000506214 REM2Q8IYK8 340 aaPredicted RBP16.81■□□□□ 0.28
TMA16-203ENST00000506214 PIP4P2Q8N4L2 257 aa16.69■□□□□ 0.26
TMA16-203ENST00000506214 PITPNM1O00562 1244 aa16.65■□□□□ 0.26
TMA16-203ENST00000506214 SP7Q8TDD2 431 aaPredicted RBP16.59■□□□□ 0.25
TMA16-203ENST00000506214 FXR2P51116 673 aaKnown RBP eCLIP16.57■□□□□ 0.24
TMA16-203ENST00000506214 SPDYE2BA6NHP3 402 aa16.47■□□□□ 0.23
TMA16-203ENST00000506214 SPDYE6P0CI01 402 aa16.47■□□□□ 0.23
TMA16-203ENST00000506214 SPDYE2Q495Y8 402 aa16.47■□□□□ 0.23
TMA16-203ENST00000506214 MKRN4PQ13434 485 aaPredicted RBP16.46■□□□□ 0.23
TMA16-203ENST00000506214 FBLN2P98095 1184 aa16.44■□□□□ 0.22
TMA16-203ENST00000506214 HAX1O00165 279 aa16.35■□□□□ 0.21
TMA16-203ENST00000506214 SSUH2Q9Y2M2 353 aa16.3■□□□□ 0.2
TMA16-203ENST00000506214 EVX2Q03828 476 aa16.28■□□□□ 0.2
TMA16-203ENST00000506214 SPDYE1Q8NFV5 336 aaPredicted RBP16.21■□□□□ 0.19
TMA16-203ENST00000506214 ZNF692Q9BU19 519 aaPredicted RBP16.2■□□□□ 0.18
TMA16-203ENST00000506214 PRKAR2AP13861 404 aaKnown RBP16.17■□□□□ 0.18
TMA16-203ENST00000506214 CLEC11AQ9Y240 323 aa16.16■□□□□ 0.18
TMA16-203ENST00000506214 C19orf67A6NJJ6 358 aa16.04■□□□□ 0.16
TMA16-203ENST00000506214 PABPN1Q86U42 306 aaKnown RBP eCLIP15.99■□□□□ 0.15
TMA16-203ENST00000506214 CHADLQ6NUI6 762 aa15.96■□□□□ 0.15
TMA16-203ENST00000506214 PRR29P0C7W0 189 aa15.87■□□□□ 0.13
TMA16-203ENST00000506214 GABBR2O75899 941 aa15.83■□□□□ 0.12
TMA16-203ENST00000506214 FARP1Q9Y4F1 1045 aaPredicted RBP15.7■□□□□ 0.1
TMA16-203ENST00000506214 CD44P16070 742 aaKnown RBP15.64■□□□□ 0.09
TMA16-203ENST00000506214 FKBP8Q14318 412 aa15.58■□□□□ 0.08
TMA16-203ENST00000506214 POTEIP0CG38 1075 aa15.57■□□□□ 0.08
TMA16-203ENST00000506214 SPDYE4A6NLX3 237 aa15.55■□□□□ 0.08
TMA16-203ENST00000506214 LHX8Q68G74 356 aa15.54■□□□□ 0.08
TMA16-203ENST00000506214 CREBZFQ9NS37 354 aa15.53■□□□□ 0.08
TMA16-203ENST00000506214 ZNF579Q8NAF0 562 aaKnown RBP15.44■□□□□ 0.06
TMA16-203ENST00000506214 STAG3Q9UJ98 1225 aa15.44■□□□□ 0.06
TMA16-203ENST00000506214 CLCN6P51797 869 aa15.43■□□□□ 0.06
TMA16-203ENST00000506214 ZRANB1Q9UGI0 708 aa15.37■□□□□ 0.05
TMA16-203ENST00000506214 FBXO3Q9UK99 471 aa15.3■□□□□ 0.04
TMA16-203ENST00000506214 MNX1P50219 401 aaPredicted RBP15.29■□□□□ 0.04
TMA16-203ENST00000506214 GALR2O43603 387 aaPredicted RBP15.27■□□□□ 0.04
TMA16-203ENST00000506214 DCBLD2Q96PD2 775 aa15.26■□□□□ 0.03
TMA16-203ENST00000506214 PHF12Q96QT6 1004 aa15.19■□□□□ 0.02
TMA16-203ENST00000506214 PROM2Q8N271 834 aa15.18■□□□□ 0.02
TMA16-203ENST00000506214 PAK3O75914 559 aaPredicted RBP15.11■□□□□ 0.01
TMA16-203ENST00000506214 NPM1P06748 294 aaKnown RBP eCLIP15.11■□□□□ 0.01
TMA16-203ENST00000506214 POTEB2H3BUK9 544 aa15.06■□□□□ 0
TMA16-203ENST00000506214 PLEKHG5O94827 1062 aa15.03■□□□□ -0
TMA16-203ENST00000506214 PELP1Q8IZL8 1130 aaKnown RBP15.03■□□□□ -0
TMA16-203ENST00000506214 OTUD5Q96G74 571 aa15.01□□□□□ -0.01
TMA16-203ENST00000506214 MS4A3Q96HJ5 214 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms