RNA–Protein interactions for RNA: ENST00000506201.1

EXOSC9-205, Transcript of exosome component 9, humanhuman

TSL 2

Gene EXOSC9, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-205ENST00000506201 AEBP2Q6ZN18 517 aaPredicted RBP28.3■■■□□ 2.12
EXOSC9-205ENST00000506201 CHIC1Q5VXU3 224 aa26.71■■□□□ 1.87
EXOSC9-205ENST00000506201 SENP3Q9H4L4 574 aaPredicted RBP24.21■■□□□ 1.47
EXOSC9-205ENST00000506201 PHF23Q9BUL5 403 aaPredicted RBP23.85■■□□□ 1.41
EXOSC9-205ENST00000506201 FOXD1Q16676 465 aa22.56■■□□□ 1.2
EXOSC9-205ENST00000506201 PLPPR3Q6T4P5 718 aa21.26■□□□□ 0.99
EXOSC9-205ENST00000506201 MSH5O43196 834 aa21.23■□□□□ 0.99
EXOSC9-205ENST00000506201 PIAS4Q8N2W9 510 aaPredicted RBP21.05■□□□□ 0.96
EXOSC9-205ENST00000506201 POTEDQ86YR6 584 aa21.03■□□□□ 0.96
EXOSC9-205ENST00000506201 PPP6R1Q9UPN7 881 aa20.93■□□□□ 0.94
EXOSC9-205ENST00000506201 ADRA2BP18089 450 aa20.86■□□□□ 0.93
EXOSC9-205ENST00000506201 MAPK8IP2Q13387 824 aaPredicted RBP19.21■□□□□ 0.67
EXOSC9-205ENST00000506201 DMRT2Q9Y5R5 561 aa19.16■□□□□ 0.66
EXOSC9-205ENST00000506201 SCAF1Q9H7N4 1312 aaKnown RBP19.13■□□□□ 0.65
EXOSC9-205ENST00000506201 PPP4R3CPQ6ZMV5 832 aa18.6■□□□□ 0.57
EXOSC9-205ENST00000506201 DCAF8L1A6NGE4 600 aa18.38■□□□□ 0.53
EXOSC9-205ENST00000506201 HOXD11P31277 338 aaPredicted RBP18.38■□□□□ 0.53
EXOSC9-205ENST00000506201 CACNB1Q02641 598 aaPredicted RBP18.32■□□□□ 0.52
EXOSC9-205ENST00000506201 CNKSR2Q8WXI2 1034 aa18.31■□□□□ 0.52
EXOSC9-205ENST00000506201 RNF216Q9NWF9 866 aaPredicted RBP18.19■□□□□ 0.5
EXOSC9-205ENST00000506201 RNF39Q9H2S5 420 aa18.07■□□□□ 0.48
EXOSC9-205ENST00000506201 NCBP3Q53F19 620 aaKnown RBP17.84■□□□□ 0.45
EXOSC9-205ENST00000506201 C1QBPQ07021 282 aaKnown RBP17.82■□□□□ 0.44
EXOSC9-205ENST00000506201 DNAJC5BQ9UF47 199 aa17.81■□□□□ 0.44
EXOSC9-205ENST00000506201 NPM3O75607 178 aaKnown RBP17.56■□□□□ 0.4
EXOSC9-205ENST00000506201 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.51■□□□□ 0.39
EXOSC9-205ENST00000506201 U3KPZ7 1027 aaPredicted RBP17.12■□□□□ 0.33
EXOSC9-205ENST00000506201 KCNA4P22459 653 aa17.04■□□□□ 0.32
EXOSC9-205ENST00000506201 SPINK5Q9NQ38 1064 aaPredicted RBP16.92■□□□□ 0.3
EXOSC9-205ENST00000506201 CAPN15O75808 1086 aa16.91■□□□□ 0.3
EXOSC9-205ENST00000506201 DSG3P32926 999 aa16.86■□□□□ 0.29
EXOSC9-205ENST00000506201 SLC4A2P04920 1241 aa16.81■□□□□ 0.28
EXOSC9-205ENST00000506201 APLP2Q06481 763 aa16.66■□□□□ 0.26
EXOSC9-205ENST00000506201 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.59■□□□□ 0.25
EXOSC9-205ENST00000506201 TRHP20396 242 aaPredicted RBP16.59■□□□□ 0.25
EXOSC9-205ENST00000506201 HNRNPUL2Q1KMD3 747 aaKnown RBP16.59■□□□□ 0.25
EXOSC9-205ENST00000506201 ZNF219Q9P2Y4 722 aaPredicted RBP16.57■□□□□ 0.24
EXOSC9-205ENST00000506201 ABCB7O75027 752 aa16.49■□□□□ 0.23
EXOSC9-205ENST00000506201 SAMD1Q6SPF0 538 aaPredicted RBP16.48■□□□□ 0.23
EXOSC9-205ENST00000506201 POTEHQ6S545 545 aa16.45■□□□□ 0.22
EXOSC9-205ENST00000506201 MYCNP04198 464 aaPredicted RBP16.27■□□□□ 0.2
EXOSC9-205ENST00000506201 SLC4A1APQ9BWU0 796 aaKnown RBP16.17■□□□□ 0.18
EXOSC9-205ENST00000506201 RBM42Q9BTD8 480 aaKnown RBP16.12■□□□□ 0.17
EXOSC9-205ENST00000506201 POLA2Q14181 598 aa16.1■□□□□ 0.17
EXOSC9-205ENST00000506201 FOXD4L1Q9NU39 408 aa15.99■□□□□ 0.15
EXOSC9-205ENST00000506201 ATF5Q9Y2D1 282 aaPredicted RBP15.87■□□□□ 0.13
EXOSC9-205ENST00000506201 CHRDL2Q6WN34 429 aa15.82■□□□□ 0.12
EXOSC9-205ENST00000506201 ZBTB12Q9Y330 459 aaPredicted RBP15.78■□□□□ 0.12
EXOSC9-205ENST00000506201 AKT1S1Q96B36 256 aa15.69■□□□□ 0.1
EXOSC9-205ENST00000506201 ZBTB22O15209 634 aa15.65■□□□□ 0.1
EXOSC9-205ENST00000506201 EHMT2Q96KQ7 1210 aa15.64■□□□□ 0.09
EXOSC9-205ENST00000506201 OSCARQ8IYS5 282 aa15.59■□□□□ 0.09
EXOSC9-205ENST00000506201 REM2Q8IYK8 340 aaPredicted RBP15.53■□□□□ 0.08
EXOSC9-205ENST00000506201 ATXN8OSP0DMR3 200 aa15.52■□□□□ 0.08
EXOSC9-205ENST00000506201 PIP4P2Q8N4L2 257 aa15.4■□□□□ 0.06
EXOSC9-205ENST00000506201 CSRNP3Q8WYN3 585 aa15.39■□□□□ 0.05
EXOSC9-205ENST00000506201 PITPNM1O00562 1244 aa15.37■□□□□ 0.05
EXOSC9-205ENST00000506201 SP7Q8TDD2 431 aaPredicted RBP15.33■□□□□ 0.04
EXOSC9-205ENST00000506201 FBLN2P98095 1184 aa15.31■□□□□ 0.04
EXOSC9-205ENST00000506201 FXR2P51116 673 aaKnown RBP eCLIP15.28■□□□□ 0.04
EXOSC9-205ENST00000506201 SPDYE2BA6NHP3 402 aa15.27■□□□□ 0.04
EXOSC9-205ENST00000506201 SPDYE6P0CI01 402 aa15.27■□□□□ 0.04
EXOSC9-205ENST00000506201 SPDYE2Q495Y8 402 aa15.27■□□□□ 0.04
EXOSC9-205ENST00000506201 HAX1O00165 279 aa15.18■□□□□ 0.02
EXOSC9-205ENST00000506201 MKRN4PQ13434 485 aaPredicted RBP15.14■□□□□ 0.01
EXOSC9-205ENST00000506201 SPDYE1Q8NFV5 336 aaPredicted RBP15.05■□□□□ -0
EXOSC9-205ENST00000506201 ZNF692Q9BU19 519 aaPredicted RBP15.05■□□□□ -0
EXOSC9-205ENST00000506201 SSUH2Q9Y2M2 353 aa15.04■□□□□ -0
EXOSC9-205ENST00000506201 CLEC11AQ9Y240 323 aa15.03■□□□□ -0
EXOSC9-205ENST00000506201 PRKAR2AP13861 404 aaKnown RBP14.98□□□□□ -0.01
EXOSC9-205ENST00000506201 EVX2Q03828 476 aa14.95□□□□□ -0.02
EXOSC9-205ENST00000506201 PABPN1Q86U42 306 aaKnown RBP eCLIP14.81□□□□□ -0.04
EXOSC9-205ENST00000506201 C19orf67A6NJJ6 358 aa14.8□□□□□ -0.04
EXOSC9-205ENST00000506201 PRR29P0C7W0 189 aa14.76□□□□□ -0.05
EXOSC9-205ENST00000506201 CHADLQ6NUI6 762 aa14.75□□□□□ -0.05
EXOSC9-205ENST00000506201 GABBR2O75899 941 aa14.63□□□□□ -0.07
EXOSC9-205ENST00000506201 FARP1Q9Y4F1 1045 aaPredicted RBP14.52□□□□□ -0.09
EXOSC9-205ENST00000506201 CD44P16070 742 aaKnown RBP14.49□□□□□ -0.09
EXOSC9-205ENST00000506201 STAG3Q9UJ98 1225 aa14.39□□□□□ -0.11
EXOSC9-205ENST00000506201 CLCN6P51797 869 aa14.37□□□□□ -0.11
EXOSC9-205ENST00000506201 LHX8Q68G74 356 aa14.37□□□□□ -0.11
EXOSC9-205ENST00000506201 SPDYE4A6NLX3 237 aa14.34□□□□□ -0.11
EXOSC9-205ENST00000506201 CREBZFQ9NS37 354 aa14.33□□□□□ -0.12
EXOSC9-205ENST00000506201 POTEIP0CG38 1075 aa14.3□□□□□ -0.12
EXOSC9-205ENST00000506201 ZNF579Q8NAF0 562 aaKnown RBP14.26□□□□□ -0.13
EXOSC9-205ENST00000506201 ZRANB1Q9UGI0 708 aa14.26□□□□□ -0.13
EXOSC9-205ENST00000506201 DCBLD2Q96PD2 775 aa14.2□□□□□ -0.14
EXOSC9-205ENST00000506201 PAK3O75914 559 aaPredicted RBP14.12□□□□□ -0.15
EXOSC9-205ENST00000506201 GALR2O43603 387 aaPredicted RBP14.09□□□□□ -0.15
EXOSC9-205ENST00000506201 NPM1P06748 294 aaKnown RBP eCLIP14.09□□□□□ -0.15
EXOSC9-205ENST00000506201 MNX1P50219 401 aaPredicted RBP14.06□□□□□ -0.16
EXOSC9-205ENST00000506201 PHF12Q96QT6 1004 aa14.03□□□□□ -0.16
EXOSC9-205ENST00000506201 FKBP8Q14318 412 aa14□□□□□ -0.17
EXOSC9-205ENST00000506201 PROM2Q8N271 834 aa13.96□□□□□ -0.17
EXOSC9-205ENST00000506201 MS4A3Q96HJ5 214 aa13.84□□□□□ -0.19
EXOSC9-205ENST00000506201 POTEB2H3BUK9 544 aa13.82□□□□□ -0.2
EXOSC9-205ENST00000506201 PELP1Q8IZL8 1130 aaKnown RBP13.82□□□□□ -0.2
EXOSC9-205ENST00000506201 OTUD5Q96G74 571 aa13.82□□□□□ -0.2
EXOSC9-205ENST00000506201 TSPYL2Q9H2G4 693 aaPredicted RBP13.8□□□□□ -0.2
EXOSC9-205ENST00000506201 ASTLQ6HA08 431 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms