RNA–Protein interactions for RNA: ENST00000506056.5

NPNT-210, Transcript of nephronectin, humanhuman

TSL 3

Gene NPNT, Length 637 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPNT-210ENST00000506056 AEBP2Q6ZN18 517 aaPredicted RBP23.04■■□□□ 1.28
NPNT-210ENST00000506056 CHIC1Q5VXU3 224 aa21.76■■□□□ 1.07
NPNT-210ENST00000506056 SENP3Q9H4L4 574 aaPredicted RBP19.95■□□□□ 0.78
NPNT-210ENST00000506056 PHF23Q9BUL5 403 aaPredicted RBP19.53■□□□□ 0.72
NPNT-210ENST00000506056 FOXD1Q16676 465 aa18.52■□□□□ 0.56
NPNT-210ENST00000506056 POTEDQ86YR6 584 aa18.01■□□□□ 0.47
NPNT-210ENST00000506056 MSH5O43196 834 aa17.7■□□□□ 0.42
NPNT-210ENST00000506056 PIAS4Q8N2W9 510 aaPredicted RBP17.26■□□□□ 0.35
NPNT-210ENST00000506056 PLPPR3Q6T4P5 718 aa17.03■□□□□ 0.32
NPNT-210ENST00000506056 PPP6R1Q9UPN7 881 aa16.84■□□□□ 0.29
NPNT-210ENST00000506056 ADRA2BP18089 450 aa16.8■□□□□ 0.28
NPNT-210ENST00000506056 DMRT2Q9Y5R5 561 aa15.68■□□□□ 0.1
NPNT-210ENST00000506056 SCAF1Q9H7N4 1312 aaKnown RBP15.63■□□□□ 0.09
NPNT-210ENST00000506056 MAPK8IP2Q13387 824 aaPredicted RBP15.55■□□□□ 0.08
NPNT-210ENST00000506056 CACNB1Q02641 598 aaPredicted RBP15.46■□□□□ 0.07
NPNT-210ENST00000506056 DCAF8L1A6NGE4 600 aa15.1■□□□□ 0.01
NPNT-210ENST00000506056 RNF39Q9H2S5 420 aa14.95□□□□□ -0.02
NPNT-210ENST00000506056 HOXD11P31277 338 aaPredicted RBP14.9□□□□□ -0.02
NPNT-210ENST00000506056 C1QBPQ07021 282 aaKnown RBP14.8□□□□□ -0.04
NPNT-210ENST00000506056 PPP4R3CPQ6ZMV5 832 aa14.79□□□□□ -0.04
NPNT-210ENST00000506056 CNKSR2Q8WXI2 1034 aa14.7□□□□□ -0.06
NPNT-210ENST00000506056 RNF216Q9NWF9 866 aaPredicted RBP14.69□□□□□ -0.06
NPNT-210ENST00000506056 DNAJC5BQ9UF47 199 aa14.6□□□□□ -0.07
NPNT-210ENST00000506056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.25□□□□□ -0.13
NPNT-210ENST00000506056 NCBP3Q53F19 620 aaKnown RBP14.21□□□□□ -0.13
NPNT-210ENST00000506056 POTEHQ6S545 545 aa14.06□□□□□ -0.16
NPNT-210ENST00000506056 NPM3O75607 178 aaKnown RBP13.83□□□□□ -0.2
NPNT-210ENST00000506056 CAPN15O75808 1086 aa13.83□□□□□ -0.2
NPNT-210ENST00000506056 DSG3P32926 999 aa13.82□□□□□ -0.2
NPNT-210ENST00000506056 U3KPZ7 1027 aaPredicted RBP13.78□□□□□ -0.2
NPNT-210ENST00000506056 EHMT2Q96KQ7 1210 aa13.71□□□□□ -0.21
NPNT-210ENST00000506056 SPINK5Q9NQ38 1064 aaPredicted RBP13.71□□□□□ -0.21
NPNT-210ENST00000506056 APLP2Q06481 763 aa13.62□□□□□ -0.23
NPNT-210ENST00000506056 KCNA4P22459 653 aa13.61□□□□□ -0.23
NPNT-210ENST00000506056 ZNF219Q9P2Y4 722 aaPredicted RBP13.51□□□□□ -0.25
NPNT-210ENST00000506056 TRHP20396 242 aaPredicted RBP13.46□□□□□ -0.25
NPNT-210ENST00000506056 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.44□□□□□ -0.26
NPNT-210ENST00000506056 HNRNPUL2Q1KMD3 747 aaKnown RBP13.44□□□□□ -0.26
NPNT-210ENST00000506056 ABCB7O75027 752 aa13.38□□□□□ -0.27
NPNT-210ENST00000506056 RBM42Q9BTD8 480 aaKnown RBP13.36□□□□□ -0.27
NPNT-210ENST00000506056 SLC4A2P04920 1241 aa13.29□□□□□ -0.28
NPNT-210ENST00000506056 SAMD1Q6SPF0 538 aaPredicted RBP13.28□□□□□ -0.28
NPNT-210ENST00000506056 CSRNP3Q8WYN3 585 aa13.2□□□□□ -0.3
NPNT-210ENST00000506056 CHRDL2Q6WN34 429 aa13.16□□□□□ -0.3
NPNT-210ENST00000506056 SLC4A1APQ9BWU0 796 aaKnown RBP13.08□□□□□ -0.32
NPNT-210ENST00000506056 POLA2Q14181 598 aa12.97□□□□□ -0.33
NPNT-210ENST00000506056 SP7Q8TDD2 431 aaPredicted RBP12.95□□□□□ -0.34
NPNT-210ENST00000506056 MYCNP04198 464 aaPredicted RBP12.9□□□□□ -0.34
NPNT-210ENST00000506056 AKT1S1Q96B36 256 aa12.88□□□□□ -0.35
NPNT-210ENST00000506056 ZBTB12Q9Y330 459 aaPredicted RBP12.82□□□□□ -0.36
NPNT-210ENST00000506056 REM2Q8IYK8 340 aaPredicted RBP12.68□□□□□ -0.38
NPNT-210ENST00000506056 PIP4P2Q8N4L2 257 aa12.68□□□□□ -0.38
NPNT-210ENST00000506056 HAX1O00165 279 aa12.67□□□□□ -0.38
NPNT-210ENST00000506056 ZBTB22O15209 634 aa12.58□□□□□ -0.4
NPNT-210ENST00000506056 FXR2P51116 673 aaKnown RBP eCLIP12.55□□□□□ -0.4
NPNT-210ENST00000506056 OSCARQ8IYS5 282 aa12.54□□□□□ -0.4
NPNT-210ENST00000506056 PITPNM1O00562 1244 aa12.53□□□□□ -0.4
NPNT-210ENST00000506056 SLC24A1O60721 1099 aa12.51□□□□□ -0.41
NPNT-210ENST00000506056 FOXD4L1Q9NU39 408 aa12.46□□□□□ -0.41
NPNT-210ENST00000506056 ATF5Q9Y2D1 282 aaPredicted RBP12.45□□□□□ -0.42
NPNT-210ENST00000506056 RTN4Q9NQC3 1192 aaKnown RBP12.34□□□□□ -0.43
NPNT-210ENST00000506056 SPDYE2BA6NHP3 402 aa12.31□□□□□ -0.44
NPNT-210ENST00000506056 SPDYE6P0CI01 402 aa12.31□□□□□ -0.44
NPNT-210ENST00000506056 SPDYE2Q495Y8 402 aa12.31□□□□□ -0.44
NPNT-210ENST00000506056 EVX2Q03828 476 aa12.29□□□□□ -0.44
NPNT-210ENST00000506056 AMER1Q5JTC6 1135 aaPredicted RBP12.28□□□□□ -0.44
NPNT-210ENST00000506056 FBLN2P98095 1184 aa12.25□□□□□ -0.45
NPNT-210ENST00000506056 PRKAR2AP13861 404 aaKnown RBP12.24□□□□□ -0.45
NPNT-210ENST00000506056 SPDYE1Q8NFV5 336 aaPredicted RBP12.24□□□□□ -0.45
NPNT-210ENST00000506056 ATXN8OSP0DMR3 200 aa12.19□□□□□ -0.46
NPNT-210ENST00000506056 CLEC11AQ9Y240 323 aa12.19□□□□□ -0.46
NPNT-210ENST00000506056 C19orf67A6NJJ6 358 aa12.17□□□□□ -0.46
NPNT-210ENST00000506056 LHX8Q68G74 356 aa12.14□□□□□ -0.47
NPNT-210ENST00000506056 GABBR2O75899 941 aa12.1□□□□□ -0.47
NPNT-210ENST00000506056 ZNF692Q9BU19 519 aaPredicted RBP12.05□□□□□ -0.48
NPNT-210ENST00000506056 SSUH2Q9Y2M2 353 aa12.01□□□□□ -0.49
NPNT-210ENST00000506056 CLCN6P51797 869 aa11.96□□□□□ -0.49
NPNT-210ENST00000506056 PRR29P0C7W0 189 aa11.95□□□□□ -0.5
NPNT-210ENST00000506056 CHADLQ6NUI6 762 aa11.92□□□□□ -0.5
NPNT-210ENST00000506056 MKRN4PQ13434 485 aaPredicted RBP11.88□□□□□ -0.51
NPNT-210ENST00000506056 CD44P16070 742 aaKnown RBP11.84□□□□□ -0.51
NPNT-210ENST00000506056 FKBP8Q14318 412 aa11.83□□□□□ -0.52
NPNT-210ENST00000506056 PABPN1Q86U42 306 aaKnown RBP eCLIP11.82□□□□□ -0.52
NPNT-210ENST00000506056 PLSCR2Q9NRY7 297 aa11.79□□□□□ -0.52
NPNT-210ENST00000506056 DCBLD2Q96PD2 775 aa11.77□□□□□ -0.53
NPNT-210ENST00000506056 FARP1Q9Y4F1 1045 aaPredicted RBP11.77□□□□□ -0.53
NPNT-210ENST00000506056 POTEIP0CG38 1075 aa11.75□□□□□ -0.53
NPNT-210ENST00000506056 ZNF579Q8NAF0 562 aaKnown RBP11.63□□□□□ -0.55
NPNT-210ENST00000506056 ZRANB1Q9UGI0 708 aa11.59□□□□□ -0.55
NPNT-210ENST00000506056 STAG3Q9UJ98 1225 aa11.53□□□□□ -0.56
NPNT-210ENST00000506056 PAK3O75914 559 aaPredicted RBP11.52□□□□□ -0.57
NPNT-210ENST00000506056 OTUD5Q96G74 571 aa11.47□□□□□ -0.57
NPNT-210ENST00000506056 POTEMA6NI47 508 aa11.45□□□□□ -0.58
NPNT-210ENST00000506056 GALR2O43603 387 aaPredicted RBP11.45□□□□□ -0.58
NPNT-210ENST00000506056 PCDH10Q9P2E7 1040 aa11.44□□□□□ -0.58
NPNT-210ENST00000506056 CREBZFQ9NS37 354 aa11.42□□□□□ -0.58
NPNT-210ENST00000506056 POTEGQ6S5H5 508 aa11.39□□□□□ -0.59
NPNT-210ENST00000506056 NPM1P06748 294 aaKnown RBP eCLIP11.37□□□□□ -0.59
NPNT-210ENST00000506056 POTEB2H3BUK9 544 aa11.35□□□□□ -0.59
NPNT-210ENST00000506056 PLCB2Q00722 1185 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms