RNA–Protein interactions for RNA: ENST00000506003.5

LIFR-204, Transcript of LIF receptor alpha, humanhuman

TSL 3

Gene LIFR, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIFR-204ENST00000506003 CHIC1Q5VXU3 224 aa34.14■■■■□ 3.06
LIFR-204ENST00000506003 AEBP2Q6ZN18 517 aaPredicted RBP34.12■■■■□ 3.05
LIFR-204ENST00000506003 PHF23Q9BUL5 403 aaPredicted RBP30.18■■■□□ 2.42
LIFR-204ENST00000506003 SENP3Q9H4L4 574 aaPredicted RBP28.71■■■□□ 2.19
LIFR-204ENST00000506003 PLPPR3Q6T4P5 718 aa28.05■■■□□ 2.08
LIFR-204ENST00000506003 FOXD1Q16676 465 aa26.6■■□□□ 1.85
LIFR-204ENST00000506003 ADRA2BP18089 450 aa26.34■■□□□ 1.81
LIFR-204ENST00000506003 PPP6R1Q9UPN7 881 aa26.32■■□□□ 1.8
LIFR-204ENST00000506003 KCNA4P22459 653 aa25.3■■□□□ 1.64
LIFR-204ENST00000506003 PIAS4Q8N2W9 510 aaPredicted RBP25.22■■□□□ 1.63
LIFR-204ENST00000506003 PPP4R3CPQ6ZMV5 832 aa24.85■■□□□ 1.57
LIFR-204ENST00000506003 EHMT2Q96KQ7 1210 aa24.49■■□□□ 1.51
LIFR-204ENST00000506003 NCBP3Q53F19 620 aaKnown RBP24.38■■□□□ 1.49
LIFR-204ENST00000506003 SLC4A1APQ9BWU0 796 aaKnown RBP24.2■■□□□ 1.46
LIFR-204ENST00000506003 NPM3O75607 178 aaKnown RBP24.13■■□□□ 1.45
LIFR-204ENST00000506003 MSH5O43196 834 aa24.11■■□□□ 1.45
LIFR-204ENST00000506003 SCAF1Q9H7N4 1312 aaKnown RBP23.95■■□□□ 1.42
LIFR-204ENST00000506003 CNKSR2Q8WXI2 1034 aa23.95■■□□□ 1.42
LIFR-204ENST00000506003 CSRNP3Q8WYN3 585 aa23.91■■□□□ 1.42
LIFR-204ENST00000506003 MAPK8IP2Q13387 824 aaPredicted RBP23.61■■□□□ 1.37
LIFR-204ENST00000506003 DNAJC5BQ9UF47 199 aa23.42■■□□□ 1.34
LIFR-204ENST00000506003 ZBTB22O15209 634 aa23.37■■□□□ 1.33
LIFR-204ENST00000506003 RNF216Q9NWF9 866 aaPredicted RBP23.29■■□□□ 1.32
LIFR-204ENST00000506003 DMRT2Q9Y5R5 561 aa23.11■■□□□ 1.29
LIFR-204ENST00000506003 HOXD11P31277 338 aaPredicted RBP23■■□□□ 1.27
LIFR-204ENST00000506003 FOXD4L1Q9NU39 408 aa23■■□□□ 1.27
LIFR-204ENST00000506003 SLC4A2P04920 1241 aa22.62■■□□□ 1.21
LIFR-204ENST00000506003 MYCNP04198 464 aaPredicted RBP22.22■■□□□ 1.15
LIFR-204ENST00000506003 ATXN8OSP0DMR3 200 aa22.14■■□□□ 1.13
LIFR-204ENST00000506003 DCAF8L1A6NGE4 600 aa21.88■■□□□ 1.09
LIFR-204ENST00000506003 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.79■■□□□ 1.08
LIFR-204ENST00000506003 U3KPZ7 1027 aaPredicted RBP21.65■■□□□ 1.06
LIFR-204ENST00000506003 ATF5Q9Y2D1 282 aaPredicted RBP21.64■■□□□ 1.05
LIFR-204ENST00000506003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.56■■□□□ 1.04
LIFR-204ENST00000506003 HNRNPUL2Q1KMD3 747 aaKnown RBP21.56■■□□□ 1.04
LIFR-204ENST00000506003 SAMD1Q6SPF0 538 aaPredicted RBP21.56■■□□□ 1.04
LIFR-204ENST00000506003 FKBP8Q14318 412 aa21.46■■□□□ 1.03
LIFR-204ENST00000506003 RTN4Q9NQC3 1192 aaKnown RBP21.15■□□□□ 0.98
LIFR-204ENST00000506003 ZNF219Q9P2Y4 722 aaPredicted RBP21.14■□□□□ 0.97
LIFR-204ENST00000506003 AMER1Q5JTC6 1135 aaPredicted RBP21.11■□□□□ 0.97
LIFR-204ENST00000506003 APLP2Q06481 763 aa21.09■□□□□ 0.97
LIFR-204ENST00000506003 RNF39Q9H2S5 420 aa20.82■□□□□ 0.92
LIFR-204ENST00000506003 MKRN4PQ13434 485 aaPredicted RBP20.77■□□□□ 0.92
LIFR-204ENST00000506003 SPINK5Q9NQ38 1064 aaPredicted RBP20.76■□□□□ 0.91
LIFR-204ENST00000506003 TRHP20396 242 aaPredicted RBP20.65■□□□□ 0.9
LIFR-204ENST00000506003 SPDYE4A6NLX3 237 aa20.62■□□□□ 0.89
LIFR-204ENST00000506003 C1QBPQ07021 282 aaKnown RBP20.57■□□□□ 0.88
LIFR-204ENST00000506003 POLA2Q14181 598 aa20.57■□□□□ 0.88
LIFR-204ENST00000506003 PROM2Q8N271 834 aa20.56■□□□□ 0.88
LIFR-204ENST00000506003 CAPN15O75808 1086 aa20.54■□□□□ 0.88
LIFR-204ENST00000506003 FBLN2P98095 1184 aa20.53■□□□□ 0.88
LIFR-204ENST00000506003 SLC24A1O60721 1099 aa20.49■□□□□ 0.87
LIFR-204ENST00000506003 POTEDQ86YR6 584 aa20.45■□□□□ 0.86
LIFR-204ENST00000506003 FBXO3Q9UK99 471 aa20.44■□□□□ 0.86
LIFR-204ENST00000506003 ZBTB12Q9Y330 459 aaPredicted RBP20.27■□□□□ 0.84
LIFR-204ENST00000506003 ABCB7O75027 752 aa20.26■□□□□ 0.83
LIFR-204ENST00000506003 VASPP50552 380 aaPredicted RBP20.2■□□□□ 0.82
LIFR-204ENST00000506003 DSG3P32926 999 aa20.09■□□□□ 0.81
LIFR-204ENST00000506003 IFNLR1Q8IU57 520 aaPredicted RBP20.03■□□□□ 0.8
LIFR-204ENST00000506003 OSCARQ8IYS5 282 aa19.85■□□□□ 0.77
LIFR-204ENST00000506003 ZNF692Q9BU19 519 aaPredicted RBP19.85■□□□□ 0.77
LIFR-204ENST00000506003 SSUH2Q9Y2M2 353 aa19.85■□□□□ 0.77
LIFR-204ENST00000506003 SPDYE2BA6NHP3 402 aa19.84■□□□□ 0.77
LIFR-204ENST00000506003 SPDYE6P0CI01 402 aa19.84■□□□□ 0.77
LIFR-204ENST00000506003 SPDYE2Q495Y8 402 aa19.84■□□□□ 0.77
LIFR-204ENST00000506003 PKD2Q13563 968 aa19.72■□□□□ 0.75
LIFR-204ENST00000506003 STAG3Q9UJ98 1225 aa19.69■□□□□ 0.74
LIFR-204ENST00000506003 PABPN1Q86U42 306 aaKnown RBP eCLIP19.64■□□□□ 0.73
LIFR-204ENST00000506003 SPOCK2Q92563 424 aa19.57■□□□□ 0.72
LIFR-204ENST00000506003 KLHL34Q8N239 644 aa19.53■□□□□ 0.72
LIFR-204ENST00000506003 PLCB2Q00722 1185 aa19.52■□□□□ 0.72
LIFR-204ENST00000506003 CACNB1Q02641 598 aaPredicted RBP19.51■□□□□ 0.71
LIFR-204ENST00000506003 PLCD3Q8N3E9 789 aa19.46■□□□□ 0.71
LIFR-204ENST00000506003 MIER1Q8N108 512 aa19.41■□□□□ 0.7
LIFR-204ENST00000506003 DCAF8L2P0C7V8 631 aa19.4■□□□□ 0.7
LIFR-204ENST00000506003 ECM2O94769 699 aaPredicted RBP19.32■□□□□ 0.68
LIFR-204ENST00000506003 ZBTB47Q9UFB7 747 aaPredicted RBP19.2■□□□□ 0.66
LIFR-204ENST00000506003 RGL2O15211 777 aa19.18■□□□□ 0.66
LIFR-204ENST00000506003 NPM1P06748 294 aaKnown RBP eCLIP19.17■□□□□ 0.66
LIFR-204ENST00000506003 PLEKHG5O94827 1062 aa19.16■□□□□ 0.66
LIFR-204ENST00000506003 HAP1P54257 671 aaPredicted RBP19.14■□□□□ 0.65
LIFR-204ENST00000506003 BBXQ8WY36 941 aaPredicted RBP19.13■□□□□ 0.65
LIFR-204ENST00000506003 CIZ1Q9ULV3 898 aaPredicted RBP19.06■□□□□ 0.64
LIFR-204ENST00000506003 AKT1S1Q96B36 256 aa19.04■□□□□ 0.64
LIFR-204ENST00000506003 RBM42Q9BTD8 480 aaKnown RBP19.03■□□□□ 0.64
LIFR-204ENST00000506003 SPDYE1Q8NFV5 336 aaPredicted RBP19.01■□□□□ 0.63
LIFR-204ENST00000506003 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.01■□□□□ 0.63
LIFR-204ENST00000506003 TRIM41Q8WV44 630 aa18.98■□□□□ 0.63
LIFR-204ENST00000506003 VSIG10Q8N0Z9 540 aa18.96■□□□□ 0.63
LIFR-204ENST00000506003 NUBP1P53384 320 aa18.94■□□□□ 0.62
LIFR-204ENST00000506003 PAXIP1Q6ZW49 1069 aaPredicted RBP18.91■□□□□ 0.62
LIFR-204ENST00000506003 CREBZFQ9NS37 354 aa18.88■□□□□ 0.61
LIFR-204ENST00000506003 GSE1Q14687 1217 aa18.87■□□□□ 0.61
LIFR-204ENST00000506003 REM2Q8IYK8 340 aaPredicted RBP18.87■□□□□ 0.61
LIFR-204ENST00000506003 MNX1P50219 401 aaPredicted RBP18.85■□□□□ 0.61
LIFR-204ENST00000506003 CHGAP10645 457 aaKnown RBP18.83■□□□□ 0.6
LIFR-204ENST00000506003 RNF25Q96BH1 459 aaPredicted RBP18.83■□□□□ 0.6
LIFR-204ENST00000506003 CFAP44Q96MT7 982 aa18.82■□□□□ 0.6
LIFR-204ENST00000506003 CLEC11AQ9Y240 323 aa18.82■□□□□ 0.6
LIFR-204ENST00000506003 PRR29P0C7W0 189 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms