RNA–Protein interactions for RNA: ENST00000505770.1

PAPD4-210, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 2

Gene PAPD4, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-210ENST00000505770 AEBP2Q6ZN18 517 aaPredicted RBP25.4■■□□□ 1.66
PAPD4-210ENST00000505770 CHIC1Q5VXU3 224 aa24.22■■□□□ 1.47
PAPD4-210ENST00000505770 SENP3Q9H4L4 574 aaPredicted RBP21.61■■□□□ 1.05
PAPD4-210ENST00000505770 PHF23Q9BUL5 403 aaPredicted RBP21.36■■□□□ 1.01
PAPD4-210ENST00000505770 FOXD1Q16676 465 aa20.15■□□□□ 0.82
PAPD4-210ENST00000505770 PLPPR3Q6T4P5 718 aa19.39■□□□□ 0.69
PAPD4-210ENST00000505770 PPP6R1Q9UPN7 881 aa18.94■□□□□ 0.62
PAPD4-210ENST00000505770 ADRA2BP18089 450 aa18.89■□□□□ 0.61
PAPD4-210ENST00000505770 PIAS4Q8N2W9 510 aaPredicted RBP18.85■□□□□ 0.61
PAPD4-210ENST00000505770 MSH5O43196 834 aa18.78■□□□□ 0.6
PAPD4-210ENST00000505770 POTEDQ86YR6 584 aa18.16■□□□□ 0.5
PAPD4-210ENST00000505770 MAPK8IP2Q13387 824 aaPredicted RBP17.32■□□□□ 0.36
PAPD4-210ENST00000505770 SCAF1Q9H7N4 1312 aaKnown RBP17.23■□□□□ 0.35
PAPD4-210ENST00000505770 DMRT2Q9Y5R5 561 aa17.17■□□□□ 0.34
PAPD4-210ENST00000505770 PPP4R3CPQ6ZMV5 832 aa17.03■□□□□ 0.32
PAPD4-210ENST00000505770 CNKSR2Q8WXI2 1034 aa16.66■□□□□ 0.26
PAPD4-210ENST00000505770 HOXD11P31277 338 aaPredicted RBP16.58■□□□□ 0.24
PAPD4-210ENST00000505770 RNF216Q9NWF9 866 aaPredicted RBP16.48■□□□□ 0.23
PAPD4-210ENST00000505770 DCAF8L1A6NGE4 600 aa16.45■□□□□ 0.22
PAPD4-210ENST00000505770 NCBP3Q53F19 620 aaKnown RBP16.37■□□□□ 0.21
PAPD4-210ENST00000505770 NPM3O75607 178 aaKnown RBP16.17■□□□□ 0.18
PAPD4-210ENST00000505770 RNF39Q9H2S5 420 aa16.06■□□□□ 0.16
PAPD4-210ENST00000505770 CACNB1Q02641 598 aaPredicted RBP16.05■□□□□ 0.16
PAPD4-210ENST00000505770 KCNA4P22459 653 aa15.98■□□□□ 0.15
PAPD4-210ENST00000505770 DNAJC5BQ9UF47 199 aa15.96■□□□□ 0.15
PAPD4-210ENST00000505770 C1QBPQ07021 282 aaKnown RBP15.81■□□□□ 0.12
PAPD4-210ENST00000505770 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.79■□□□□ 0.12
PAPD4-210ENST00000505770 U3KPZ7 1027 aaPredicted RBP15.5■□□□□ 0.07
PAPD4-210ENST00000505770 SLC4A2P04920 1241 aa15.43■□□□□ 0.06
PAPD4-210ENST00000505770 SPINK5Q9NQ38 1064 aaPredicted RBP15.24■□□□□ 0.03
PAPD4-210ENST00000505770 CAPN15O75808 1086 aa15.19■□□□□ 0.02
PAPD4-210ENST00000505770 SLC4A1APQ9BWU0 796 aaKnown RBP15.09■□□□□ 0.01
PAPD4-210ENST00000505770 DSG3P32926 999 aa15.08■□□□□ 0
PAPD4-210ENST00000505770 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.05■□□□□ -0
PAPD4-210ENST00000505770 HNRNPUL2Q1KMD3 747 aaKnown RBP15.05■□□□□ -0
PAPD4-210ENST00000505770 APLP2Q06481 763 aa15.02■□□□□ -0
PAPD4-210ENST00000505770 SAMD1Q6SPF0 538 aaPredicted RBP14.98□□□□□ -0.01
PAPD4-210ENST00000505770 TRHP20396 242 aaPredicted RBP14.97□□□□□ -0.01
PAPD4-210ENST00000505770 MYCNP04198 464 aaPredicted RBP14.94□□□□□ -0.02
PAPD4-210ENST00000505770 ZNF219Q9P2Y4 722 aaPredicted RBP14.93□□□□□ -0.02
PAPD4-210ENST00000505770 EHMT2Q96KQ7 1210 aa14.91□□□□□ -0.02
PAPD4-210ENST00000505770 ABCB7O75027 752 aa14.86□□□□□ -0.03
PAPD4-210ENST00000505770 FOXD4L1Q9NU39 408 aa14.86□□□□□ -0.03
PAPD4-210ENST00000505770 ZBTB22O15209 634 aa14.71□□□□□ -0.05
PAPD4-210ENST00000505770 ATF5Q9Y2D1 282 aaPredicted RBP14.62□□□□□ -0.07
PAPD4-210ENST00000505770 POLA2Q14181 598 aa14.6□□□□□ -0.07
PAPD4-210ENST00000505770 ATXN8OSP0DMR3 200 aa14.37□□□□□ -0.11
PAPD4-210ENST00000505770 CSRNP3Q8WYN3 585 aa14.37□□□□□ -0.11
PAPD4-210ENST00000505770 RBM42Q9BTD8 480 aaKnown RBP14.36□□□□□ -0.11
PAPD4-210ENST00000505770 ZBTB12Q9Y330 459 aaPredicted RBP14.29□□□□□ -0.12
PAPD4-210ENST00000505770 POTEHQ6S545 545 aa14.24□□□□□ -0.13
PAPD4-210ENST00000505770 OSCARQ8IYS5 282 aa14.15□□□□□ -0.14
PAPD4-210ENST00000505770 AKT1S1Q96B36 256 aa14.06□□□□□ -0.16
PAPD4-210ENST00000505770 CHRDL2Q6WN34 429 aa14.02□□□□□ -0.17
PAPD4-210ENST00000505770 FBLN2P98095 1184 aa14□□□□□ -0.17
PAPD4-210ENST00000505770 MKRN4PQ13434 485 aaPredicted RBP13.95□□□□□ -0.18
PAPD4-210ENST00000505770 REM2Q8IYK8 340 aaPredicted RBP13.95□□□□□ -0.18
PAPD4-210ENST00000505770 SPDYE2BA6NHP3 402 aa13.88□□□□□ -0.19
PAPD4-210ENST00000505770 SPDYE6P0CI01 402 aa13.88□□□□□ -0.19
PAPD4-210ENST00000505770 SPDYE2Q495Y8 402 aa13.88□□□□□ -0.19
PAPD4-210ENST00000505770 PITPNM1O00562 1244 aa13.8□□□□□ -0.2
PAPD4-210ENST00000505770 ZNF692Q9BU19 519 aaPredicted RBP13.73□□□□□ -0.21
PAPD4-210ENST00000505770 PIP4P2Q8N4L2 257 aa13.72□□□□□ -0.21
PAPD4-210ENST00000505770 SSUH2Q9Y2M2 353 aa13.72□□□□□ -0.21
PAPD4-210ENST00000505770 FXR2P51116 673 aaKnown RBP eCLIP13.65□□□□□ -0.22
PAPD4-210ENST00000505770 SPDYE1Q8NFV5 336 aaPredicted RBP13.6□□□□□ -0.23
PAPD4-210ENST00000505770 CLEC11AQ9Y240 323 aa13.58□□□□□ -0.24
PAPD4-210ENST00000505770 PABPN1Q86U42 306 aaKnown RBP eCLIP13.54□□□□□ -0.24
PAPD4-210ENST00000505770 PRKAR2AP13861 404 aaKnown RBP13.44□□□□□ -0.26
PAPD4-210ENST00000505770 HAX1O00165 279 aa13.42□□□□□ -0.26
PAPD4-210ENST00000505770 SP7Q8TDD2 431 aaPredicted RBP13.41□□□□□ -0.26
PAPD4-210ENST00000505770 PRR29P0C7W0 189 aa13.36□□□□□ -0.27
PAPD4-210ENST00000505770 SPDYE4A6NLX3 237 aa13.33□□□□□ -0.28
PAPD4-210ENST00000505770 CHADLQ6NUI6 762 aa13.33□□□□□ -0.28
PAPD4-210ENST00000505770 EVX2Q03828 476 aa13.3□□□□□ -0.28
PAPD4-210ENST00000505770 SLC24A1O60721 1099 aa13.28□□□□□ -0.28
PAPD4-210ENST00000505770 RTN4Q9NQC3 1192 aaKnown RBP13.26□□□□□ -0.29
PAPD4-210ENST00000505770 C19orf67A6NJJ6 358 aa13.21□□□□□ -0.29
PAPD4-210ENST00000505770 AMER1Q5JTC6 1135 aaPredicted RBP13.17□□□□□ -0.3
PAPD4-210ENST00000505770 STAG3Q9UJ98 1225 aa13.17□□□□□ -0.3
PAPD4-210ENST00000505770 FARP1Q9Y4F1 1045 aaPredicted RBP13.13□□□□□ -0.31
PAPD4-210ENST00000505770 CREBZFQ9NS37 354 aa13.08□□□□□ -0.32
PAPD4-210ENST00000505770 PROM2Q8N271 834 aa13.04□□□□□ -0.32
PAPD4-210ENST00000505770 CD44P16070 742 aaKnown RBP13.02□□□□□ -0.33
PAPD4-210ENST00000505770 GABBR2O75899 941 aa12.99□□□□□ -0.33
PAPD4-210ENST00000505770 FKBP8Q14318 412 aa12.9□□□□□ -0.34
PAPD4-210ENST00000505770 MNX1P50219 401 aaPredicted RBP12.87□□□□□ -0.35
PAPD4-210ENST00000505770 ZRANB1Q9UGI0 708 aa12.85□□□□□ -0.35
PAPD4-210ENST00000505770 NPM1P06748 294 aaKnown RBP eCLIP12.82□□□□□ -0.36
PAPD4-210ENST00000505770 ZNF579Q8NAF0 562 aaKnown RBP12.82□□□□□ -0.36
PAPD4-210ENST00000505770 CLCN6P51797 869 aa12.78□□□□□ -0.36
PAPD4-210ENST00000505770 PAK3O75914 559 aaPredicted RBP12.75□□□□□ -0.37
PAPD4-210ENST00000505770 POTEIP0CG38 1075 aa12.73□□□□□ -0.37
PAPD4-210ENST00000505770 PHF12Q96QT6 1004 aa12.71□□□□□ -0.37
PAPD4-210ENST00000505770 MIER1Q8N108 512 aa12.69□□□□□ -0.38
PAPD4-210ENST00000505770 GALR2O43603 387 aaPredicted RBP12.67□□□□□ -0.38
PAPD4-210ENST00000505770 PLEKHG5O94827 1062 aa12.65□□□□□ -0.38
PAPD4-210ENST00000505770 DCBLD2Q96PD2 775 aa12.64□□□□□ -0.39
PAPD4-210ENST00000505770 TSPYL2Q9H2G4 693 aaPredicted RBP12.62□□□□□ -0.39
PAPD4-210ENST00000505770 PLCD3Q8N3E9 789 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms