RNA–Protein interactions for RNA: ENST00000505566.1

FBXO4-204, Transcript of F-box protein 4, humanhuman

TSL 2

Gene FBXO4, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO4-204ENST00000505566 AEBP2Q6ZN18 517 aaPredicted RBP33.41■■■□□ 2.94
FBXO4-204ENST00000505566 CHIC1Q5VXU3 224 aa31.93■■■□□ 2.7
FBXO4-204ENST00000505566 SENP3Q9H4L4 574 aaPredicted RBP28.25■■■□□ 2.11
FBXO4-204ENST00000505566 PHF23Q9BUL5 403 aaPredicted RBP28.12■■■□□ 2.09
FBXO4-204ENST00000505566 FOXD1Q16676 465 aa26.41■■□□□ 1.82
FBXO4-204ENST00000505566 PLPPR3Q6T4P5 718 aa25.56■■□□□ 1.68
FBXO4-204ENST00000505566 PPP6R1Q9UPN7 881 aa25■■□□□ 1.59
FBXO4-204ENST00000505566 ADRA2BP18089 450 aa24.87■■□□□ 1.57
FBXO4-204ENST00000505566 PIAS4Q8N2W9 510 aaPredicted RBP24.65■■□□□ 1.54
FBXO4-204ENST00000505566 MSH5O43196 834 aa24.44■■□□□ 1.5
FBXO4-204ENST00000505566 POTEDQ86YR6 584 aa23.43■■□□□ 1.34
FBXO4-204ENST00000505566 MAPK8IP2Q13387 824 aaPredicted RBP22.78■■□□□ 1.24
FBXO4-204ENST00000505566 SCAF1Q9H7N4 1312 aaKnown RBP22.54■■□□□ 1.2
FBXO4-204ENST00000505566 DMRT2Q9Y5R5 561 aa22.52■■□□□ 1.2
FBXO4-204ENST00000505566 PPP4R3CPQ6ZMV5 832 aa22.49■■□□□ 1.19
FBXO4-204ENST00000505566 CNKSR2Q8WXI2 1034 aa21.95■■□□□ 1.1
FBXO4-204ENST00000505566 HOXD11P31277 338 aaPredicted RBP21.84■■□□□ 1.09
FBXO4-204ENST00000505566 RNF216Q9NWF9 866 aaPredicted RBP21.7■■□□□ 1.06
FBXO4-204ENST00000505566 NCBP3Q53F19 620 aaKnown RBP21.58■■□□□ 1.05
FBXO4-204ENST00000505566 NPM3O75607 178 aaKnown RBP21.46■■□□□ 1.03
FBXO4-204ENST00000505566 DCAF8L1A6NGE4 600 aa21.41■■□□□ 1.02
FBXO4-204ENST00000505566 KCNA4P22459 653 aa21.36■■□□□ 1.01
FBXO4-204ENST00000505566 RNF39Q9H2S5 420 aa21■□□□□ 0.95
FBXO4-204ENST00000505566 DNAJC5BQ9UF47 199 aa20.98■□□□□ 0.95
FBXO4-204ENST00000505566 CACNB1Q02641 598 aaPredicted RBP20.75■□□□□ 0.91
FBXO4-204ENST00000505566 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.65■□□□□ 0.9
FBXO4-204ENST00000505566 C1QBPQ07021 282 aaKnown RBP20.62■□□□□ 0.89
FBXO4-204ENST00000505566 SLC4A2P04920 1241 aa20.48■□□□□ 0.87
FBXO4-204ENST00000505566 U3KPZ7 1027 aaPredicted RBP20.42■□□□□ 0.86
FBXO4-204ENST00000505566 SLC4A1APQ9BWU0 796 aaKnown RBP20.12■□□□□ 0.81
FBXO4-204ENST00000505566 SPINK5Q9NQ38 1064 aaPredicted RBP20.03■□□□□ 0.8
FBXO4-204ENST00000505566 CAPN15O75808 1086 aa19.82■□□□□ 0.76
FBXO4-204ENST00000505566 DSG3P32926 999 aa19.76■□□□□ 0.75
FBXO4-204ENST00000505566 ZBTB22O15209 634 aa19.75■□□□□ 0.75
FBXO4-204ENST00000505566 MYCNP04198 464 aaPredicted RBP19.75■□□□□ 0.75
FBXO4-204ENST00000505566 FOXD4L1Q9NU39 408 aa19.75■□□□□ 0.75
FBXO4-204ENST00000505566 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.73■□□□□ 0.75
FBXO4-204ENST00000505566 HNRNPUL2Q1KMD3 747 aaKnown RBP19.73■□□□□ 0.75
FBXO4-204ENST00000505566 SAMD1Q6SPF0 538 aaPredicted RBP19.7■□□□□ 0.74
FBXO4-204ENST00000505566 APLP2Q06481 763 aa19.61■□□□□ 0.73
FBXO4-204ENST00000505566 TRHP20396 242 aaPredicted RBP19.6■□□□□ 0.73
FBXO4-204ENST00000505566 ZNF219Q9P2Y4 722 aaPredicted RBP19.56■□□□□ 0.72
FBXO4-204ENST00000505566 ABCB7O75027 752 aa19.47■□□□□ 0.71
FBXO4-204ENST00000505566 ATF5Q9Y2D1 282 aaPredicted RBP19.43■□□□□ 0.7
FBXO4-204ENST00000505566 POLA2Q14181 598 aa19.19■□□□□ 0.66
FBXO4-204ENST00000505566 ATXN8OSP0DMR3 200 aa19.08■□□□□ 0.64
FBXO4-204ENST00000505566 CSRNP3Q8WYN3 585 aa19.06■□□□□ 0.64
FBXO4-204ENST00000505566 EHMT2Q96KQ7 1210 aa18.87■□□□□ 0.61
FBXO4-204ENST00000505566 ZBTB12Q9Y330 459 aaPredicted RBP18.72■□□□□ 0.59
FBXO4-204ENST00000505566 RBM42Q9BTD8 480 aaKnown RBP18.69■□□□□ 0.58
FBXO4-204ENST00000505566 OSCARQ8IYS5 282 aa18.62■□□□□ 0.57
FBXO4-204ENST00000505566 MKRN4PQ13434 485 aaPredicted RBP18.56■□□□□ 0.56
FBXO4-204ENST00000505566 FBLN2P98095 1184 aa18.4■□□□□ 0.54
FBXO4-204ENST00000505566 AKT1S1Q96B36 256 aa18.4■□□□□ 0.54
FBXO4-204ENST00000505566 POTEHQ6S545 545 aa18.37■□□□□ 0.53
FBXO4-204ENST00000505566 REM2Q8IYK8 340 aaPredicted RBP18.28■□□□□ 0.52
FBXO4-204ENST00000505566 SPDYE2BA6NHP3 402 aa18.25■□□□□ 0.51
FBXO4-204ENST00000505566 SPDYE6P0CI01 402 aa18.25■□□□□ 0.51
FBXO4-204ENST00000505566 SPDYE2Q495Y8 402 aa18.25■□□□□ 0.51
FBXO4-204ENST00000505566 CHRDL2Q6WN34 429 aa18.25■□□□□ 0.51
FBXO4-204ENST00000505566 SSUH2Q9Y2M2 353 aa18.15■□□□□ 0.5
FBXO4-204ENST00000505566 PITPNM1O00562 1244 aa18.1■□□□□ 0.49
FBXO4-204ENST00000505566 ZNF692Q9BU19 519 aaPredicted RBP18.05■□□□□ 0.48
FBXO4-204ENST00000505566 PIP4P2Q8N4L2 257 aa17.93■□□□□ 0.46
FBXO4-204ENST00000505566 FXR2P51116 673 aaKnown RBP eCLIP17.88■□□□□ 0.45
FBXO4-204ENST00000505566 PABPN1Q86U42 306 aaKnown RBP eCLIP17.85■□□□□ 0.45
FBXO4-204ENST00000505566 SPDYE1Q8NFV5 336 aaPredicted RBP17.82■□□□□ 0.44
FBXO4-204ENST00000505566 CLEC11AQ9Y240 323 aa17.75■□□□□ 0.43
FBXO4-204ENST00000505566 SPDYE4A6NLX3 237 aa17.69■□□□□ 0.42
FBXO4-204ENST00000505566 PRKAR2AP13861 404 aaKnown RBP17.57■□□□□ 0.4
FBXO4-204ENST00000505566 PRR29P0C7W0 189 aa17.5■□□□□ 0.39
FBXO4-204ENST00000505566 CHADLQ6NUI6 762 aa17.49■□□□□ 0.39
FBXO4-204ENST00000505566 PROM2Q8N271 834 aa17.48■□□□□ 0.39
FBXO4-204ENST00000505566 EVX2Q03828 476 aa17.42■□□□□ 0.38
FBXO4-204ENST00000505566 HAX1O00165 279 aa17.4■□□□□ 0.38
FBXO4-204ENST00000505566 SP7Q8TDD2 431 aaPredicted RBP17.36■□□□□ 0.37
FBXO4-204ENST00000505566 STAG3Q9UJ98 1225 aa17.32■□□□□ 0.36
FBXO4-204ENST00000505566 C19orf67A6NJJ6 358 aa17.3■□□□□ 0.36
FBXO4-204ENST00000505566 CREBZFQ9NS37 354 aa17.3■□□□□ 0.36
FBXO4-204ENST00000505566 FARP1Q9Y4F1 1045 aaPredicted RBP17.24■□□□□ 0.35
FBXO4-204ENST00000505566 FKBP8Q14318 412 aa17.15■□□□□ 0.34
FBXO4-204ENST00000505566 MNX1P50219 401 aaPredicted RBP17.11■□□□□ 0.33
FBXO4-204ENST00000505566 CD44P16070 742 aaKnown RBP17.02■□□□□ 0.32
FBXO4-204ENST00000505566 GABBR2O75899 941 aa16.94■□□□□ 0.3
FBXO4-204ENST00000505566 ZNF579Q8NAF0 562 aaKnown RBP16.83■□□□□ 0.28
FBXO4-204ENST00000505566 ZRANB1Q9UGI0 708 aa16.82■□□□□ 0.28
FBXO4-204ENST00000505566 NPM1P06748 294 aaKnown RBP eCLIP16.79■□□□□ 0.28
FBXO4-204ENST00000505566 MIER1Q8N108 512 aa16.77■□□□□ 0.28
FBXO4-204ENST00000505566 POTEIP0CG38 1075 aa16.7■□□□□ 0.26
FBXO4-204ENST00000505566 PHF12Q96QT6 1004 aa16.7■□□□□ 0.26
FBXO4-204ENST00000505566 PLCD3Q8N3E9 789 aa16.65■□□□□ 0.26
FBXO4-204ENST00000505566 CLCN6P51797 869 aa16.64■□□□□ 0.25
FBXO4-204ENST00000505566 GALR2O43603 387 aaPredicted RBP16.63■□□□□ 0.25
FBXO4-204ENST00000505566 PAK3O75914 559 aaPredicted RBP16.63■□□□□ 0.25
FBXO4-204ENST00000505566 RASEFQ8IZ41 740 aa16.63■□□□□ 0.25
FBXO4-204ENST00000505566 CCDC61Q9Y6R9 512 aa16.6■□□□□ 0.25
FBXO4-204ENST00000505566 TSPYL2Q9H2G4 693 aaPredicted RBP16.59■□□□□ 0.25
FBXO4-204ENST00000505566 FBXO3Q9UK99 471 aa16.59■□□□□ 0.25
FBXO4-204ENST00000505566 PLEKHG5O94827 1062 aa16.58■□□□□ 0.24
FBXO4-204ENST00000505566 NUBP1P53384 320 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms