RNA–Protein interactions for RNA: ENST00000505525.1

MRPS18C-202, Transcript of mitochondrial ribosomal protein S18C, humanhuman

TSL 3

Gene MRPS18C, Length 442 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS18C-202ENST00000505525 AEBP2Q6ZN18 517 aaPredicted RBP33.21■■■□□ 2.91
MRPS18C-202ENST00000505525 CHIC1Q5VXU3 224 aa31.32■■■□□ 2.6
MRPS18C-202ENST00000505525 SENP3Q9H4L4 574 aaPredicted RBP28.3■■■□□ 2.12
MRPS18C-202ENST00000505525 PHF23Q9BUL5 403 aaPredicted RBP27.91■■■□□ 2.06
MRPS18C-202ENST00000505525 FOXD1Q16676 465 aa26.44■■□□□ 1.82
MRPS18C-202ENST00000505525 PLPPR3Q6T4P5 718 aa24.9■■□□□ 1.58
MRPS18C-202ENST00000505525 MSH5O43196 834 aa24.78■■□□□ 1.56
MRPS18C-202ENST00000505525 PIAS4Q8N2W9 510 aaPredicted RBP24.58■■□□□ 1.53
MRPS18C-202ENST00000505525 PPP6R1Q9UPN7 881 aa24.58■■□□□ 1.53
MRPS18C-202ENST00000505525 POTEDQ86YR6 584 aa24.55■■□□□ 1.52
MRPS18C-202ENST00000505525 ADRA2BP18089 450 aa24.43■■□□□ 1.5
MRPS18C-202ENST00000505525 MAPK8IP2Q13387 824 aaPredicted RBP22.52■■□□□ 1.2
MRPS18C-202ENST00000505525 DMRT2Q9Y5R5 561 aa22.45■■□□□ 1.18
MRPS18C-202ENST00000505525 SCAF1Q9H7N4 1312 aaKnown RBP22.32■■□□□ 1.16
MRPS18C-202ENST00000505525 PPP4R3CPQ6ZMV5 832 aa21.8■■□□□ 1.08
MRPS18C-202ENST00000505525 HOXD11P31277 338 aaPredicted RBP21.57■■□□□ 1.04
MRPS18C-202ENST00000505525 CNKSR2Q8WXI2 1034 aa21.44■■□□□ 1.02
MRPS18C-202ENST00000505525 DCAF8L1A6NGE4 600 aa21.36■■□□□ 1.01
MRPS18C-202ENST00000505525 CACNB1Q02641 598 aaPredicted RBP21.33■■□□□ 1.01
MRPS18C-202ENST00000505525 RNF216Q9NWF9 866 aaPredicted RBP21.32■■□□□ 1
MRPS18C-202ENST00000505525 RNF39Q9H2S5 420 aa21.17■□□□□ 0.98
MRPS18C-202ENST00000505525 DNAJC5BQ9UF47 199 aa20.92■□□□□ 0.94
MRPS18C-202ENST00000505525 NCBP3Q53F19 620 aaKnown RBP20.85■□□□□ 0.93
MRPS18C-202ENST00000505525 C1QBPQ07021 282 aaKnown RBP20.82■□□□□ 0.92
MRPS18C-202ENST00000505525 NPM3O75607 178 aaKnown RBP20.62■□□□□ 0.89
MRPS18C-202ENST00000505525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.42■□□□□ 0.86
MRPS18C-202ENST00000505525 U3KPZ7 1027 aaPredicted RBP20.06■□□□□ 0.8
MRPS18C-202ENST00000505525 KCNA4P22459 653 aa20.03■□□□□ 0.8
MRPS18C-202ENST00000505525 SPINK5Q9NQ38 1064 aaPredicted RBP19.8■□□□□ 0.76
MRPS18C-202ENST00000505525 SLC4A2P04920 1241 aa19.78■□□□□ 0.76
MRPS18C-202ENST00000505525 DSG3P32926 999 aa19.74■□□□□ 0.75
MRPS18C-202ENST00000505525 CAPN15O75808 1086 aa19.7■□□□□ 0.74
MRPS18C-202ENST00000505525 APLP2Q06481 763 aa19.39■□□□□ 0.69
MRPS18C-202ENST00000505525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.36■□□□□ 0.69
MRPS18C-202ENST00000505525 HNRNPUL2Q1KMD3 747 aaKnown RBP19.36■□□□□ 0.69
MRPS18C-202ENST00000505525 ZNF219Q9P2Y4 722 aaPredicted RBP19.35■□□□□ 0.69
MRPS18C-202ENST00000505525 TRHP20396 242 aaPredicted RBP19.34■□□□□ 0.69
MRPS18C-202ENST00000505525 SAMD1Q6SPF0 538 aaPredicted RBP19.26■□□□□ 0.67
MRPS18C-202ENST00000505525 ABCB7O75027 752 aa19.25■□□□□ 0.67
MRPS18C-202ENST00000505525 POTEHQ6S545 545 aa19.17■□□□□ 0.66
MRPS18C-202ENST00000505525 MYCNP04198 464 aaPredicted RBP19.05■□□□□ 0.64
MRPS18C-202ENST00000505525 POLA2Q14181 598 aa18.83■□□□□ 0.6
MRPS18C-202ENST00000505525 SLC4A1APQ9BWU0 796 aaKnown RBP18.82■□□□□ 0.6
MRPS18C-202ENST00000505525 RBM42Q9BTD8 480 aaKnown RBP18.79■□□□□ 0.6
MRPS18C-202ENST00000505525 FOXD4L1Q9NU39 408 aa18.74■□□□□ 0.59
MRPS18C-202ENST00000505525 ATF5Q9Y2D1 282 aaPredicted RBP18.67■□□□□ 0.58
MRPS18C-202ENST00000505525 CHRDL2Q6WN34 429 aa18.47■□□□□ 0.55
MRPS18C-202ENST00000505525 ZBTB22O15209 634 aa18.46■□□□□ 0.55
MRPS18C-202ENST00000505525 ZBTB12Q9Y330 459 aaPredicted RBP18.43■□□□□ 0.54
MRPS18C-202ENST00000505525 AKT1S1Q96B36 256 aa18.35■□□□□ 0.53
MRPS18C-202ENST00000505525 ATXN8OSP0DMR3 200 aa18.23■□□□□ 0.51
MRPS18C-202ENST00000505525 OSCARQ8IYS5 282 aa18.23■□□□□ 0.51
MRPS18C-202ENST00000505525 REM2Q8IYK8 340 aaPredicted RBP18.17■□□□□ 0.5
MRPS18C-202ENST00000505525 PIP4P2Q8N4L2 257 aa18.01■□□□□ 0.47
MRPS18C-202ENST00000505525 PITPNM1O00562 1244 aa17.98■□□□□ 0.47
MRPS18C-202ENST00000505525 FXR2P51116 673 aaKnown RBP eCLIP17.91■□□□□ 0.46
MRPS18C-202ENST00000505525 SP7Q8TDD2 431 aaPredicted RBP17.89■□□□□ 0.45
MRPS18C-202ENST00000505525 SPDYE2BA6NHP3 402 aa17.87■□□□□ 0.45
MRPS18C-202ENST00000505525 SPDYE6P0CI01 402 aa17.87■□□□□ 0.45
MRPS18C-202ENST00000505525 SPDYE2Q495Y8 402 aa17.87■□□□□ 0.45
MRPS18C-202ENST00000505525 FBLN2P98095 1184 aa17.85■□□□□ 0.45
MRPS18C-202ENST00000505525 MKRN4PQ13434 485 aaPredicted RBP17.81■□□□□ 0.44
MRPS18C-202ENST00000505525 HAX1O00165 279 aa17.66■□□□□ 0.42
MRPS18C-202ENST00000505525 SSUH2Q9Y2M2 353 aa17.66■□□□□ 0.42
MRPS18C-202ENST00000505525 SPDYE1Q8NFV5 336 aaPredicted RBP17.57■□□□□ 0.4
MRPS18C-202ENST00000505525 ZNF692Q9BU19 519 aaPredicted RBP17.57■□□□□ 0.4
MRPS18C-202ENST00000505525 EVX2Q03828 476 aa17.53■□□□□ 0.4
MRPS18C-202ENST00000505525 CLEC11AQ9Y240 323 aa17.49■□□□□ 0.39
MRPS18C-202ENST00000505525 PRKAR2AP13861 404 aaKnown RBP17.48■□□□□ 0.39
MRPS18C-202ENST00000505525 CSRNP3Q8WYN3 585 aa17.4■□□□□ 0.38
MRPS18C-202ENST00000505525 C19orf67A6NJJ6 358 aa17.34■□□□□ 0.37
MRPS18C-202ENST00000505525 PABPN1Q86U42 306 aaKnown RBP eCLIP17.32■□□□□ 0.36
MRPS18C-202ENST00000505525 CHADLQ6NUI6 762 aa17.23■□□□□ 0.35
MRPS18C-202ENST00000505525 PRR29P0C7W0 189 aa17.21■□□□□ 0.35
MRPS18C-202ENST00000505525 GABBR2O75899 941 aa17.09■□□□□ 0.33
MRPS18C-202ENST00000505525 FARP1Q9Y4F1 1045 aaPredicted RBP16.99■□□□□ 0.31
MRPS18C-202ENST00000505525 EHMT2Q96KQ7 1210 aa16.94■□□□□ 0.3
MRPS18C-202ENST00000505525 CD44P16070 742 aaKnown RBP16.91■□□□□ 0.3
MRPS18C-202ENST00000505525 CREBZFQ9NS37 354 aa16.81■□□□□ 0.28
MRPS18C-202ENST00000505525 STAG3Q9UJ98 1225 aa16.8■□□□□ 0.28
MRPS18C-202ENST00000505525 SPDYE4A6NLX3 237 aa16.79■□□□□ 0.28
MRPS18C-202ENST00000505525 POTEIP0CG38 1075 aa16.78■□□□□ 0.28
MRPS18C-202ENST00000505525 CLCN6P51797 869 aa16.78■□□□□ 0.28
MRPS18C-202ENST00000505525 LHX8Q68G74 356 aa16.75■□□□□ 0.27
MRPS18C-202ENST00000505525 ZNF579Q8NAF0 562 aaKnown RBP16.7■□□□□ 0.26
MRPS18C-202ENST00000505525 ZRANB1Q9UGI0 708 aa16.62■□□□□ 0.25
MRPS18C-202ENST00000505525 MNX1P50219 401 aaPredicted RBP16.56■□□□□ 0.24
MRPS18C-202ENST00000505525 DCBLD2Q96PD2 775 aa16.51■□□□□ 0.23
MRPS18C-202ENST00000505525 PROM2Q8N271 834 aa16.49■□□□□ 0.23
MRPS18C-202ENST00000505525 GALR2O43603 387 aaPredicted RBP16.48■□□□□ 0.23
MRPS18C-202ENST00000505525 NPM1P06748 294 aaKnown RBP eCLIP16.43■□□□□ 0.22
MRPS18C-202ENST00000505525 PAK3O75914 559 aaPredicted RBP16.4■□□□□ 0.22
MRPS18C-202ENST00000505525 PHF12Q96QT6 1004 aa16.39■□□□□ 0.21
MRPS18C-202ENST00000505525 POTEB2H3BUK9 544 aa16.22■□□□□ 0.19
MRPS18C-202ENST00000505525 PELP1Q8IZL8 1130 aaKnown RBP16.21■□□□□ 0.19
MRPS18C-202ENST00000505525 MS4A3Q96HJ5 214 aa16.19■□□□□ 0.18
MRPS18C-202ENST00000505525 OTUD5Q96G74 571 aa16.18■□□□□ 0.18
MRPS18C-202ENST00000505525 ASTLQ6HA08 431 aaPredicted RBP16.17■□□□□ 0.18
MRPS18C-202ENST00000505525 CCDC61Q9Y6R9 512 aa16.14■□□□□ 0.17
MRPS18C-202ENST00000505525 ATMINO43313 823 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms