RNA–Protein interactions for RNA: ENST00000505421.1

ZFYVE28-204, Transcript of zinc finger FYVE-type containing 28, humanhuman

TSL 2

Gene ZFYVE28, Length 839 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28-204ENST00000505421 AEBP2Q6ZN18 517 aaPredicted RBP34.7■■■■□ 3.15
ZFYVE28-204ENST00000505421 CHIC1Q5VXU3 224 aa33.31■■■□□ 2.92
ZFYVE28-204ENST00000505421 SENP3Q9H4L4 574 aaPredicted RBP29.62■■■□□ 2.33
ZFYVE28-204ENST00000505421 PHF23Q9BUL5 403 aaPredicted RBP29.27■■■□□ 2.28
ZFYVE28-204ENST00000505421 FOXD1Q16676 465 aa27.53■■■□□ 2
ZFYVE28-204ENST00000505421 PLPPR3Q6T4P5 718 aa26.8■■□□□ 1.88
ZFYVE28-204ENST00000505421 PPP6R1Q9UPN7 881 aa25.98■■□□□ 1.75
ZFYVE28-204ENST00000505421 ADRA2BP18089 450 aa25.95■■□□□ 1.74
ZFYVE28-204ENST00000505421 PIAS4Q8N2W9 510 aaPredicted RBP25.84■■□□□ 1.73
ZFYVE28-204ENST00000505421 MSH5O43196 834 aa25.68■■□□□ 1.7
ZFYVE28-204ENST00000505421 POTEDQ86YR6 584 aa24.48■■□□□ 1.51
ZFYVE28-204ENST00000505421 SCAF1Q9H7N4 1312 aaKnown RBP23.81■■□□□ 1.4
ZFYVE28-204ENST00000505421 MAPK8IP2Q13387 824 aaPredicted RBP23.72■■□□□ 1.39
ZFYVE28-204ENST00000505421 PPP4R3CPQ6ZMV5 832 aa23.52■■□□□ 1.36
ZFYVE28-204ENST00000505421 DMRT2Q9Y5R5 561 aa23.52■■□□□ 1.36
ZFYVE28-204ENST00000505421 CNKSR2Q8WXI2 1034 aa23.01■■□□□ 1.27
ZFYVE28-204ENST00000505421 HOXD11P31277 338 aaPredicted RBP22.76■■□□□ 1.23
ZFYVE28-204ENST00000505421 NCBP3Q53F19 620 aaKnown RBP22.76■■□□□ 1.23
ZFYVE28-204ENST00000505421 RNF216Q9NWF9 866 aaPredicted RBP22.7■■□□□ 1.22
ZFYVE28-204ENST00000505421 DCAF8L1A6NGE4 600 aa22.61■■□□□ 1.21
ZFYVE28-204ENST00000505421 NPM3O75607 178 aaKnown RBP22.37■■□□□ 1.17
ZFYVE28-204ENST00000505421 KCNA4P22459 653 aa22.23■■□□□ 1.15
ZFYVE28-204ENST00000505421 DNAJC5BQ9UF47 199 aa21.92■■□□□ 1.1
ZFYVE28-204ENST00000505421 RNF39Q9H2S5 420 aa21.91■■□□□ 1.1
ZFYVE28-204ENST00000505421 CACNB1Q02641 598 aaPredicted RBP21.86■■□□□ 1.09
ZFYVE28-204ENST00000505421 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.77■■□□□ 1.08
ZFYVE28-204ENST00000505421 C1QBPQ07021 282 aaKnown RBP21.64■■□□□ 1.05
ZFYVE28-204ENST00000505421 U3KPZ7 1027 aaPredicted RBP21.27■■□□□ 1
ZFYVE28-204ENST00000505421 SLC4A2P04920 1241 aa21.26■□□□□ 0.99
ZFYVE28-204ENST00000505421 SLC4A1APQ9BWU0 796 aaKnown RBP21.09■□□□□ 0.97
ZFYVE28-204ENST00000505421 CAPN15O75808 1086 aa20.88■□□□□ 0.93
ZFYVE28-204ENST00000505421 SPINK5Q9NQ38 1064 aaPredicted RBP20.88■□□□□ 0.93
ZFYVE28-204ENST00000505421 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.86■□□□□ 0.93
ZFYVE28-204ENST00000505421 HNRNPUL2Q1KMD3 747 aaKnown RBP20.86■□□□□ 0.93
ZFYVE28-204ENST00000505421 APLP2Q06481 763 aa20.81■□□□□ 0.92
ZFYVE28-204ENST00000505421 SAMD1Q6SPF0 538 aaPredicted RBP20.74■□□□□ 0.91
ZFYVE28-204ENST00000505421 MYCNP04198 464 aaPredicted RBP20.71■□□□□ 0.91
ZFYVE28-204ENST00000505421 FOXD4L1Q9NU39 408 aa20.66■□□□□ 0.9
ZFYVE28-204ENST00000505421 TRHP20396 242 aaPredicted RBP20.63■□□□□ 0.89
ZFYVE28-204ENST00000505421 DSG3P32926 999 aa20.63■□□□□ 0.89
ZFYVE28-204ENST00000505421 ZNF219Q9P2Y4 722 aaPredicted RBP20.59■□□□□ 0.89
ZFYVE28-204ENST00000505421 ZBTB22O15209 634 aa20.41■□□□□ 0.86
ZFYVE28-204ENST00000505421 ABCB7O75027 752 aa20.4■□□□□ 0.86
ZFYVE28-204ENST00000505421 ATF5Q9Y2D1 282 aaPredicted RBP20.16■□□□□ 0.82
ZFYVE28-204ENST00000505421 POLA2Q14181 598 aa20.13■□□□□ 0.81
ZFYVE28-204ENST00000505421 ATXN8OSP0DMR3 200 aa20.01■□□□□ 0.79
ZFYVE28-204ENST00000505421 CSRNP3Q8WYN3 585 aa19.8■□□□□ 0.76
ZFYVE28-204ENST00000505421 ZBTB12Q9Y330 459 aaPredicted RBP19.78■□□□□ 0.76
ZFYVE28-204ENST00000505421 EHMT2Q96KQ7 1210 aa19.75■□□□□ 0.75
ZFYVE28-204ENST00000505421 RBM42Q9BTD8 480 aaKnown RBP19.73■□□□□ 0.75
ZFYVE28-204ENST00000505421 OSCARQ8IYS5 282 aa19.45■□□□□ 0.7
ZFYVE28-204ENST00000505421 FBLN2P98095 1184 aa19.44■□□□□ 0.7
ZFYVE28-204ENST00000505421 AKT1S1Q96B36 256 aa19.33■□□□□ 0.68
ZFYVE28-204ENST00000505421 POTEHQ6S545 545 aa19.26■□□□□ 0.67
ZFYVE28-204ENST00000505421 MKRN4PQ13434 485 aaPredicted RBP19.25■□□□□ 0.67
ZFYVE28-204ENST00000505421 SPDYE2BA6NHP3 402 aa19.17■□□□□ 0.66
ZFYVE28-204ENST00000505421 SPDYE6P0CI01 402 aa19.17■□□□□ 0.66
ZFYVE28-204ENST00000505421 SPDYE2Q495Y8 402 aa19.17■□□□□ 0.66
ZFYVE28-204ENST00000505421 CHRDL2Q6WN34 429 aa19.14■□□□□ 0.65
ZFYVE28-204ENST00000505421 REM2Q8IYK8 340 aaPredicted RBP19.14■□□□□ 0.65
ZFYVE28-204ENST00000505421 ZNF692Q9BU19 519 aaPredicted RBP19.01■□□□□ 0.63
ZFYVE28-204ENST00000505421 PITPNM1O00562 1244 aa18.91■□□□□ 0.62
ZFYVE28-204ENST00000505421 SSUH2Q9Y2M2 353 aa18.91■□□□□ 0.62
ZFYVE28-204ENST00000505421 SPDYE1Q8NFV5 336 aaPredicted RBP18.77■□□□□ 0.6
ZFYVE28-204ENST00000505421 PIP4P2Q8N4L2 257 aa18.74■□□□□ 0.59
ZFYVE28-204ENST00000505421 CLEC11AQ9Y240 323 aa18.74■□□□□ 0.59
ZFYVE28-204ENST00000505421 PABPN1Q86U42 306 aaKnown RBP eCLIP18.73■□□□□ 0.59
ZFYVE28-204ENST00000505421 FXR2P51116 673 aaKnown RBP eCLIP18.68■□□□□ 0.58
ZFYVE28-204ENST00000505421 SPDYE4A6NLX3 237 aa18.56■□□□□ 0.56
ZFYVE28-204ENST00000505421 PRR29P0C7W0 189 aa18.47■□□□□ 0.55
ZFYVE28-204ENST00000505421 PRKAR2AP13861 404 aaKnown RBP18.46■□□□□ 0.55
ZFYVE28-204ENST00000505421 HAX1O00165 279 aa18.37■□□□□ 0.53
ZFYVE28-204ENST00000505421 STAG3Q9UJ98 1225 aa18.31■□□□□ 0.52
ZFYVE28-204ENST00000505421 CHADLQ6NUI6 762 aa18.3■□□□□ 0.52
ZFYVE28-204ENST00000505421 SP7Q8TDD2 431 aaPredicted RBP18.21■□□□□ 0.51
ZFYVE28-204ENST00000505421 PROM2Q8N271 834 aa18.1■□□□□ 0.49
ZFYVE28-204ENST00000505421 EVX2Q03828 476 aa18.09■□□□□ 0.49
ZFYVE28-204ENST00000505421 C19orf67A6NJJ6 358 aa18.07■□□□□ 0.48
ZFYVE28-204ENST00000505421 FARP1Q9Y4F1 1045 aaPredicted RBP18.07■□□□□ 0.48
ZFYVE28-204ENST00000505421 CREBZFQ9NS37 354 aa18.03■□□□□ 0.48
ZFYVE28-204ENST00000505421 FKBP8Q14318 412 aa17.97■□□□□ 0.47
ZFYVE28-204ENST00000505421 CD44P16070 742 aaKnown RBP17.89■□□□□ 0.45
ZFYVE28-204ENST00000505421 NPM1P06748 294 aaKnown RBP eCLIP17.78■□□□□ 0.44
ZFYVE28-204ENST00000505421 MNX1P50219 401 aaPredicted RBP17.74■□□□□ 0.43
ZFYVE28-204ENST00000505421 GABBR2O75899 941 aa17.73■□□□□ 0.43
ZFYVE28-204ENST00000505421 PLEKHG5O94827 1062 aa17.71■□□□□ 0.43
ZFYVE28-204ENST00000505421 MIER1Q8N108 512 aa17.71■□□□□ 0.43
ZFYVE28-204ENST00000505421 ZRANB1Q9UGI0 708 aa17.7■□□□□ 0.42
ZFYVE28-204ENST00000505421 PAK3O75914 559 aaPredicted RBP17.67■□□□□ 0.42
ZFYVE28-204ENST00000505421 CLCN6P51797 869 aa17.61■□□□□ 0.41
ZFYVE28-204ENST00000505421 PLCD3Q8N3E9 789 aa17.61■□□□□ 0.41
ZFYVE28-204ENST00000505421 ZNF579Q8NAF0 562 aaKnown RBP17.61■□□□□ 0.41
ZFYVE28-204ENST00000505421 FBXO3Q9UK99 471 aa17.54■□□□□ 0.4
ZFYVE28-204ENST00000505421 TSPYL2Q9H2G4 693 aaPredicted RBP17.46■□□□□ 0.39
ZFYVE28-204ENST00000505421 ZBTB47Q9UFB7 747 aaPredicted RBP17.46■□□□□ 0.39
ZFYVE28-204ENST00000505421 PHF12Q96QT6 1004 aa17.45■□□□□ 0.38
ZFYVE28-204ENST00000505421 GALR2O43603 387 aaPredicted RBP17.37■□□□□ 0.37
ZFYVE28-204ENST00000505421 DCBLD2Q96PD2 775 aa17.37■□□□□ 0.37
ZFYVE28-204ENST00000505421 RASEFQ8IZ41 740 aa17.34■□□□□ 0.37
ZFYVE28-204ENST00000505421 POTEIP0CG38 1075 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms