RNA–Protein interactions for RNA: ENST00000505402.1

CAST-216, Transcript of calpastatin, humanhuman

TSL 4

Gene CAST, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-216ENST00000505402 AEBP2Q6ZN18 517 aaPredicted RBP16.72■□□□□ 0.27
CAST-216ENST00000505402 CHIC1Q5VXU3 224 aa15.93■□□□□ 0.14
CAST-216ENST00000505402 SENP3Q9H4L4 574 aaPredicted RBP14.18□□□□□ -0.14
CAST-216ENST00000505402 PHF23Q9BUL5 403 aaPredicted RBP14.06□□□□□ -0.16
CAST-216ENST00000505402 FOXD1Q16676 465 aa13.26□□□□□ -0.29
CAST-216ENST00000505402 PLPPR3Q6T4P5 718 aa12.74□□□□□ -0.37
CAST-216ENST00000505402 PPP6R1Q9UPN7 881 aa12.5□□□□□ -0.41
CAST-216ENST00000505402 ADRA2BP18089 450 aa12.45□□□□□ -0.42
CAST-216ENST00000505402 PIAS4Q8N2W9 510 aaPredicted RBP12.38□□□□□ -0.43
CAST-216ENST00000505402 MSH5O43196 834 aa12.31□□□□□ -0.44
CAST-216ENST00000505402 POTEDQ86YR6 584 aa11.96□□□□□ -0.49
CAST-216ENST00000505402 MAPK8IP2Q13387 824 aaPredicted RBP11.43□□□□□ -0.58
CAST-216ENST00000505402 SCAF1Q9H7N4 1312 aaKnown RBP11.32□□□□□ -0.6
CAST-216ENST00000505402 DMRT2Q9Y5R5 561 aa11.28□□□□□ -0.6
CAST-216ENST00000505402 PPP4R3CPQ6ZMV5 832 aa11.21□□□□□ -0.61
CAST-216ENST00000505402 CNKSR2Q8WXI2 1034 aa10.96□□□□□ -0.65
CAST-216ENST00000505402 HOXD11P31277 338 aaPredicted RBP10.9□□□□□ -0.66
CAST-216ENST00000505402 RNF216Q9NWF9 866 aaPredicted RBP10.84□□□□□ -0.67
CAST-216ENST00000505402 DCAF8L1A6NGE4 600 aa10.81□□□□□ -0.68
CAST-216ENST00000505402 NCBP3Q53F19 620 aaKnown RBP10.77□□□□□ -0.69
CAST-216ENST00000505402 NPM3O75607 178 aaKnown RBP10.65□□□□□ -0.7
CAST-216ENST00000505402 KCNA4P22459 653 aa10.55□□□□□ -0.72
CAST-216ENST00000505402 CACNB1Q02641 598 aaPredicted RBP10.54□□□□□ -0.72
CAST-216ENST00000505402 RNF39Q9H2S5 420 aa10.54□□□□□ -0.72
CAST-216ENST00000505402 DNAJC5BQ9UF47 199 aa10.48□□□□□ -0.73
CAST-216ENST00000505402 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.38□□□□□ -0.75
CAST-216ENST00000505402 C1QBPQ07021 282 aaKnown RBP10.37□□□□□ -0.75
CAST-216ENST00000505402 PELP1Q8IZL8 1130 aaKnown RBP10.27□□□□□ -0.77
CAST-216ENST00000505402 MYT1Q01538 1121 aa10.22□□□□□ -0.77
CAST-216ENST00000505402 U3KPZ7 1027 aaPredicted RBP10.19□□□□□ -0.78
CAST-216ENST00000505402 SLC4A2P04920 1241 aa10.17□□□□□ -0.78
CAST-216ENST00000505402 SPINK5Q9NQ38 1064 aaPredicted RBP10.03□□□□□ -0.8
CAST-216ENST00000505402 CAPN15O75808 1086 aa9.98□□□□□ -0.81
CAST-216ENST00000505402 SLC4A1APQ9BWU0 796 aaKnown RBP9.95□□□□□ -0.82
CAST-216ENST00000505402 DSG3P32926 999 aa9.91□□□□□ -0.82
CAST-216ENST00000505402 TTBK1Q5TCY1 1321 aaPredicted RBP9.87□□□□□ -0.83
CAST-216ENST00000505402 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.87□□□□□ -0.83
CAST-216ENST00000505402 HNRNPUL2Q1KMD3 747 aaKnown RBP9.87□□□□□ -0.83
CAST-216ENST00000505402 TRHP20396 242 aaPredicted RBP9.85□□□□□ -0.83
CAST-216ENST00000505402 APLP2Q06481 763 aa9.84□□□□□ -0.83
CAST-216ENST00000505402 SAMD1Q6SPF0 538 aaPredicted RBP9.84□□□□□ -0.83
CAST-216ENST00000505402 MYCNP04198 464 aaPredicted RBP9.82□□□□□ -0.84
CAST-216ENST00000505402 ZNF219Q9P2Y4 722 aaPredicted RBP9.79□□□□□ -0.84
CAST-216ENST00000505402 ABCB7O75027 752 aa9.78□□□□□ -0.84
CAST-216ENST00000505402 FOXD4L1Q9NU39 408 aa9.77□□□□□ -0.85
CAST-216ENST00000505402 ZBTB22O15209 634 aa9.72□□□□□ -0.85
CAST-216ENST00000505402 ATF5Q9Y2D1 282 aaPredicted RBP9.66□□□□□ -0.86
CAST-216ENST00000505402 POLA2Q14181 598 aa9.62□□□□□ -0.87
CAST-216ENST00000505402 ATXN8OSP0DMR3 200 aa9.46□□□□□ -0.9
CAST-216ENST00000505402 SLC24A1O60721 1099 aa9.45□□□□□ -0.9
CAST-216ENST00000505402 RBM42Q9BTD8 480 aaKnown RBP9.4□□□□□ -0.9
CAST-216ENST00000505402 HRCP23327 699 aa9.37□□□□□ -0.91
CAST-216ENST00000505402 ZBTB12Q9Y330 459 aaPredicted RBP9.36□□□□□ -0.91
CAST-216ENST00000505402 POTEHQ6S545 545 aa9.34□□□□□ -0.91
CAST-216ENST00000505402 CSRNP3Q8WYN3 585 aa9.34□□□□□ -0.91
CAST-216ENST00000505402 OSCARQ8IYS5 282 aa9.29□□□□□ -0.92
CAST-216ENST00000505402 EHMT2Q96KQ7 1210 aa9.27□□□□□ -0.93
CAST-216ENST00000505402 AKT1S1Q96B36 256 aa9.23□□□□□ -0.93
CAST-216ENST00000505402 MKRN4PQ13434 485 aaPredicted RBP9.2□□□□□ -0.94
CAST-216ENST00000505402 CHRDL2Q6WN34 429 aa9.2□□□□□ -0.94
CAST-216ENST00000505402 FBLN2P98095 1184 aa9.19□□□□□ -0.94
CAST-216ENST00000505402 ERICH6Q7L0X2 663 aa9.18□□□□□ -0.94
CAST-216ENST00000505402 REM2Q8IYK8 340 aaPredicted RBP9.17□□□□□ -0.94
CAST-216ENST00000505402 SPDYE2BA6NHP3 402 aa9.11□□□□□ -0.95
CAST-216ENST00000505402 SPDYE6P0CI01 402 aa9.11□□□□□ -0.95
CAST-216ENST00000505402 SPDYE2Q495Y8 402 aa9.11□□□□□ -0.95
CAST-216ENST00000505402 PITPNM1O00562 1244 aa9.07□□□□□ -0.96
CAST-216ENST00000505402 ZNF692Q9BU19 519 aaPredicted RBP9.04□□□□□ -0.96
CAST-216ENST00000505402 PIP4P2Q8N4L2 257 aa9.02□□□□□ -0.97
CAST-216ENST00000505402 SSUH2Q9Y2M2 353 aa9.01□□□□□ -0.97
CAST-216ENST00000505402 FXR2P51116 673 aaKnown RBP eCLIP8.98□□□□□ -0.975e-6■□□□□ 9.5
CAST-216ENST00000505402 PRKCSHP14314 528 aaPredicted RBP8.94□□□□□ -0.98
CAST-216ENST00000505402 CLEC11AQ9Y240 323 aa8.93□□□□□ -0.98
CAST-216ENST00000505402 SPDYE1Q8NFV5 336 aaPredicted RBP8.92□□□□□ -0.98
CAST-216ENST00000505402 PABPN1Q86U42 306 aaKnown RBP eCLIP8.91□□□□□ -0.98
CAST-216ENST00000505402 ZEB1P37275 1124 aaPredicted RBP8.9□□□□□ -0.98
CAST-216ENST00000505402 CENPBP07199 599 aaPredicted RBP8.87□□□□□ -0.99
CAST-216ENST00000505402 BCL11AQ9H165 835 aa8.84□□□□□ -0.99
CAST-216ENST00000505402 NISCHQ9Y2I1 1504 aa8.84□□□□□ -0.99
CAST-216ENST00000505402 PRKAR2AP13861 404 aaKnown RBP8.83□□□□□ -1
CAST-216ENST00000505402 HAX1O00165 279 aa8.82□□□□□ -1
CAST-216ENST00000505402 PRR29P0C7W0 189 aa8.79□□□□□ -1
CAST-216ENST00000505402 SP7Q8TDD2 431 aaPredicted RBP8.79□□□□□ -1
CAST-216ENST00000505402 SPDYE4A6NLX3 237 aa8.78□□□□□ -1
CAST-216ENST00000505402 CHADLQ6NUI6 762 aa8.78□□□□□ -1
CAST-216ENST00000505402 EVX2Q03828 476 aa8.77□□□□□ -1.01
CAST-216ENST00000505402 ACIN1Q9UKV3 1341 aaKnown RBP8.77□□□□□ -1.01
CAST-216ENST00000505402 DCAF1Q9Y4B6 1507 aa8.74□□□□□ -1.01
CAST-216ENST00000505402 CCDC180Q9P1Z9 1646 aa8.7□□□□□ -1.02
CAST-216ENST00000505402 RTN4Q9NQC3 1192 aaKnown RBP8.7□□□□□ -1.02
CAST-216ENST00000505402 C19orf67A6NJJ6 358 aa8.68□□□□□ -1.02
CAST-216ENST00000505402 PPARGC1BQ86YN6 1023 aaKnown RBP8.67□□□□□ -1.02
CAST-216ENST00000505402 AMER1Q5JTC6 1135 aaPredicted RBP8.66□□□□□ -1.02
CAST-216ENST00000505402 DAXXQ9UER7 740 aaPredicted RBP8.66□□□□□ -1.02
CAST-216ENST00000505402 FAM9AQ8IZU1 332 aaPredicted RBP8.65□□□□□ -1.02
CAST-216ENST00000505402 STAG3Q9UJ98 1225 aa8.65□□□□□ -1.02
CAST-216ENST00000505402 CLSPNQ9HAW4 1339 aa8.64□□□□□ -1.03
CAST-216ENST00000505402 FARP1Q9Y4F1 1045 aaPredicted RBP8.64□□□□□ -1.03
CAST-216ENST00000505402 ANP32EQ9BTT0 268 aa8.63□□□□□ -1.03
CAST-216ENST00000505402 CREBZFQ9NS37 354 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms