RNA–Protein interactions for RNA: ENST00000505393.1

DDX60-202, Transcript of DExD/H-box helicase 60, humanhuman

TSL 5

Gene DDX60, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-202ENST00000505393 AEBP2Q6ZN18 517 aaPredicted RBP26.47■■□□□ 1.83
DDX60-202ENST00000505393 CHIC1Q5VXU3 224 aa25.17■■□□□ 1.62
DDX60-202ENST00000505393 SENP3Q9H4L4 574 aaPredicted RBP22.37■■□□□ 1.17
DDX60-202ENST00000505393 PHF23Q9BUL5 403 aaPredicted RBP22.17■■□□□ 1.14
DDX60-202ENST00000505393 FOXD1Q16676 465 aa20.94■□□□□ 0.94
DDX60-202ENST00000505393 PLPPR3Q6T4P5 718 aa20.07■□□□□ 0.8
DDX60-202ENST00000505393 POTEDQ86YR6 584 aa20.07■□□□□ 0.8
DDX60-202ENST00000505393 PPP6R1Q9UPN7 881 aa19.74■□□□□ 0.75
DDX60-202ENST00000505393 ADRA2BP18089 450 aa19.61■□□□□ 0.73
DDX60-202ENST00000505393 MSH5O43196 834 aa19.52■□□□□ 0.72
DDX60-202ENST00000505393 PIAS4Q8N2W9 510 aaPredicted RBP19.48■□□□□ 0.71
DDX60-202ENST00000505393 MAPK8IP2Q13387 824 aaPredicted RBP17.99■□□□□ 0.47
DDX60-202ENST00000505393 DMRT2Q9Y5R5 561 aa17.83■□□□□ 0.44
DDX60-202ENST00000505393 SCAF1Q9H7N4 1312 aaKnown RBP17.74■□□□□ 0.43
DDX60-202ENST00000505393 PPP4R3CPQ6ZMV5 832 aa17.65■□□□□ 0.42
DDX60-202ENST00000505393 HOXD11P31277 338 aaPredicted RBP17.26■□□□□ 0.35
DDX60-202ENST00000505393 CNKSR2Q8WXI2 1034 aa17.26■□□□□ 0.35
DDX60-202ENST00000505393 RNF216Q9NWF9 866 aaPredicted RBP17.1■□□□□ 0.33
DDX60-202ENST00000505393 CACNB1Q02641 598 aaPredicted RBP17.09■□□□□ 0.33
DDX60-202ENST00000505393 NCBP3Q53F19 620 aaKnown RBP16.88■□□□□ 0.29
DDX60-202ENST00000505393 DCAF8L1A6NGE4 600 aa16.87■□□□□ 0.29
DDX60-202ENST00000505393 NPM3O75607 178 aaKnown RBP16.82■□□□□ 0.28
DDX60-202ENST00000505393 RNF39Q9H2S5 420 aa16.69■□□□□ 0.26
DDX60-202ENST00000505393 KCNA4P22459 653 aa16.63■□□□□ 0.25
DDX60-202ENST00000505393 DNAJC5BQ9UF47 199 aa16.62■□□□□ 0.25
DDX60-202ENST00000505393 C1QBPQ07021 282 aaKnown RBP16.36■□□□□ 0.21
DDX60-202ENST00000505393 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.26■□□□□ 0.19
DDX60-202ENST00000505393 U3KPZ7 1027 aaPredicted RBP16.11■□□□□ 0.17
DDX60-202ENST00000505393 SLC4A2P04920 1241 aa16.1■□□□□ 0.17
DDX60-202ENST00000505393 SPINK5Q9NQ38 1064 aaPredicted RBP15.82■□□□□ 0.12
DDX60-202ENST00000505393 DSG3P32926 999 aa15.66■□□□□ 0.1
DDX60-202ENST00000505393 CAPN15O75808 1086 aa15.63■□□□□ 0.09
DDX60-202ENST00000505393 POTEHQ6S545 545 aa15.62■□□□□ 0.09
DDX60-202ENST00000505393 SLC4A1APQ9BWU0 796 aaKnown RBP15.62■□□□□ 0.09
DDX60-202ENST00000505393 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.49■□□□□ 0.07
DDX60-202ENST00000505393 HNRNPUL2Q1KMD3 747 aaKnown RBP15.49■□□□□ 0.07
DDX60-202ENST00000505393 MYCNP04198 464 aaPredicted RBP15.47■□□□□ 0.07
DDX60-202ENST00000505393 SAMD1Q6SPF0 538 aaPredicted RBP15.46■□□□□ 0.07
DDX60-202ENST00000505393 TRHP20396 242 aaPredicted RBP15.42■□□□□ 0.06
DDX60-202ENST00000505393 APLP2Q06481 763 aa15.41■□□□□ 0.06
DDX60-202ENST00000505393 ZNF219Q9P2Y4 722 aaPredicted RBP15.41■□□□□ 0.06
DDX60-202ENST00000505393 ZBTB22O15209 634 aa15.4■□□□□ 0.06
DDX60-202ENST00000505393 FOXD4L1Q9NU39 408 aa15.4■□□□□ 0.06
DDX60-202ENST00000505393 ABCB7O75027 752 aa15.34■□□□□ 0.05
DDX60-202ENST00000505393 ATF5Q9Y2D1 282 aaPredicted RBP15.25■□□□□ 0.03
DDX60-202ENST00000505393 POLA2Q14181 598 aa15.09■□□□□ 0.01
DDX60-202ENST00000505393 ATXN8OSP0DMR3 200 aa14.92□□□□□ -0.02
DDX60-202ENST00000505393 RBM42Q9BTD8 480 aaKnown RBP14.79□□□□□ -0.04
DDX60-202ENST00000505393 CSRNP3Q8WYN3 585 aa14.73□□□□□ -0.05
DDX60-202ENST00000505393 ZBTB12Q9Y330 459 aaPredicted RBP14.72□□□□□ -0.05
DDX60-202ENST00000505393 OSCARQ8IYS5 282 aa14.65□□□□□ -0.06
DDX60-202ENST00000505393 MKRN4PQ13434 485 aaPredicted RBP14.57□□□□□ -0.08
DDX60-202ENST00000505393 AKT1S1Q96B36 256 aa14.54□□□□□ -0.08
DDX60-202ENST00000505393 CHRDL2Q6WN34 429 aa14.53□□□□□ -0.08
DDX60-202ENST00000505393 EHMT2Q96KQ7 1210 aa14.48□□□□□ -0.09
DDX60-202ENST00000505393 REM2Q8IYK8 340 aaPredicted RBP14.44□□□□□ -0.1
DDX60-202ENST00000505393 FBLN2P98095 1184 aa14.4□□□□□ -0.1
DDX60-202ENST00000505393 SP7Q8TDD2 431 aaPredicted RBP14.36□□□□□ -0.11
DDX60-202ENST00000505393 SPDYE2BA6NHP3 402 aa14.35□□□□□ -0.11
DDX60-202ENST00000505393 SPDYE6P0CI01 402 aa14.35□□□□□ -0.11
DDX60-202ENST00000505393 SPDYE2Q495Y8 402 aa14.35□□□□□ -0.11
DDX60-202ENST00000505393 PITPNM1O00562 1244 aa14.31□□□□□ -0.12
DDX60-202ENST00000505393 SSUH2Q9Y2M2 353 aa14.28□□□□□ -0.12
DDX60-202ENST00000505393 PIP4P2Q8N4L2 257 aa14.22□□□□□ -0.13
DDX60-202ENST00000505393 FXR2P51116 673 aaKnown RBP eCLIP14.18□□□□□ -0.14
DDX60-202ENST00000505393 ZNF692Q9BU19 519 aaPredicted RBP14.14□□□□□ -0.15
DDX60-202ENST00000505393 SPDYE1Q8NFV5 336 aaPredicted RBP14.02□□□□□ -0.17
DDX60-202ENST00000505393 PABPN1Q86U42 306 aaKnown RBP eCLIP13.99□□□□□ -0.17
DDX60-202ENST00000505393 HAX1O00165 279 aa13.95□□□□□ -0.18
DDX60-202ENST00000505393 CLEC11AQ9Y240 323 aa13.94□□□□□ -0.18
DDX60-202ENST00000505393 PRKAR2AP13861 404 aaKnown RBP13.87□□□□□ -0.19
DDX60-202ENST00000505393 EVX2Q03828 476 aa13.85□□□□□ -0.19
DDX60-202ENST00000505393 SPDYE4A6NLX3 237 aa13.78□□□□□ -0.2
DDX60-202ENST00000505393 CHADLQ6NUI6 762 aa13.77□□□□□ -0.21
DDX60-202ENST00000505393 PRR29P0C7W0 189 aa13.74□□□□□ -0.21
DDX60-202ENST00000505393 C19orf67A6NJJ6 358 aa13.72□□□□□ -0.21
DDX60-202ENST00000505393 PROM2Q8N271 834 aa13.67□□□□□ -0.22
DDX60-202ENST00000505393 CREBZFQ9NS37 354 aa13.6□□□□□ -0.23
DDX60-202ENST00000505393 FARP1Q9Y4F1 1045 aaPredicted RBP13.59□□□□□ -0.23
DDX60-202ENST00000505393 STAG3Q9UJ98 1225 aa13.55□□□□□ -0.24
DDX60-202ENST00000505393 MNX1P50219 401 aaPredicted RBP13.46□□□□□ -0.25
DDX60-202ENST00000505393 GABBR2O75899 941 aa13.44□□□□□ -0.26
DDX60-202ENST00000505393 LHX8Q68G74 356 aa13.44□□□□□ -0.26
DDX60-202ENST00000505393 CD44P16070 742 aaKnown RBP13.43□□□□□ -0.26
DDX60-202ENST00000505393 ZNF579Q8NAF0 562 aaKnown RBP13.31□□□□□ -0.28
DDX60-202ENST00000505393 POTEIP0CG38 1075 aa13.28□□□□□ -0.28
DDX60-202ENST00000505393 FKBP8Q14318 412 aa13.23□□□□□ -0.29
DDX60-202ENST00000505393 ZRANB1Q9UGI0 708 aa13.23□□□□□ -0.29
DDX60-202ENST00000505393 CLCN6P51797 869 aa13.17□□□□□ -0.3
DDX60-202ENST00000505393 NPM1P06748 294 aaKnown RBP eCLIP13.16□□□□□ -0.3
DDX60-202ENST00000505393 PHF12Q96QT6 1004 aa13.16□□□□□ -0.3
DDX60-202ENST00000505393 GALR2O43603 387 aaPredicted RBP13.13□□□□□ -0.31
DDX60-202ENST00000505393 PLSCR2Q9NRY7 297 aa13.1□□□□□ -0.31
DDX60-202ENST00000505393 MIER1Q8N108 512 aa13.05□□□□□ -0.32
DDX60-202ENST00000505393 CCDC61Q9Y6R9 512 aa13.05□□□□□ -0.32
DDX60-202ENST00000505393 PAK3O75914 559 aaPredicted RBP13.04□□□□□ -0.32
DDX60-202ENST00000505393 RASEFQ8IZ41 740 aa13.03□□□□□ -0.32
DDX60-202ENST00000505393 MS4A3Q96HJ5 214 aa12.98□□□□□ -0.33
DDX60-202ENST00000505393 TSPYL2Q9H2G4 693 aaPredicted RBP12.98□□□□□ -0.33
DDX60-202ENST00000505393 NUBP1P53384 320 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms