RNA–Protein interactions for RNA: ENST00000504971.1

FBXO38-208, Transcript of F-box protein 38, humanhuman

TSL 3

Gene FBXO38, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO38-208ENST00000504971 AEBP2Q6ZN18 517 aaPredicted RBP23.54■■□□□ 1.36
FBXO38-208ENST00000504971 CHIC1Q5VXU3 224 aa22.22■■□□□ 1.15
FBXO38-208ENST00000504971 SENP3Q9H4L4 574 aaPredicted RBP20.07■□□□□ 0.8
FBXO38-208ENST00000504971 PHF23Q9BUL5 403 aaPredicted RBP19.78■□□□□ 0.76
FBXO38-208ENST00000504971 FOXD1Q16676 465 aa18.74■□□□□ 0.59
FBXO38-208ENST00000504971 PLPPR3Q6T4P5 718 aa17.66■□□□□ 0.42
FBXO38-208ENST00000504971 MSH5O43196 834 aa17.58■□□□□ 0.4
FBXO38-208ENST00000504971 PIAS4Q8N2W9 510 aaPredicted RBP17.42■□□□□ 0.38
FBXO38-208ENST00000504971 PPP6R1Q9UPN7 881 aa17.41■□□□□ 0.38
FBXO38-208ENST00000504971 POTEDQ86YR6 584 aa17.39■□□□□ 0.37
FBXO38-208ENST00000504971 ADRA2BP18089 450 aa17.31■□□□□ 0.36
FBXO38-208ENST00000504971 MAPK8IP2Q13387 824 aaPredicted RBP15.95■□□□□ 0.14
FBXO38-208ENST00000504971 DMRT2Q9Y5R5 561 aa15.92■□□□□ 0.14
FBXO38-208ENST00000504971 SCAF1Q9H7N4 1312 aaKnown RBP15.83■□□□□ 0.12
FBXO38-208ENST00000504971 PPP4R3CPQ6ZMV5 832 aa15.45■□□□□ 0.06
FBXO38-208ENST00000504971 HOXD11P31277 338 aaPredicted RBP15.3■□□□□ 0.04
FBXO38-208ENST00000504971 CNKSR2Q8WXI2 1034 aa15.21■□□□□ 0.03
FBXO38-208ENST00000504971 DCAF8L1A6NGE4 600 aa15.13■□□□□ 0.01
FBXO38-208ENST00000504971 RNF216Q9NWF9 866 aaPredicted RBP15.13■□□□□ 0.01
FBXO38-208ENST00000504971 CACNB1Q02641 598 aaPredicted RBP15.11■□□□□ 0.01
FBXO38-208ENST00000504971 RNF39Q9H2S5 420 aa15.01□□□□□ -0.01
FBXO38-208ENST00000504971 DNAJC5BQ9UF47 199 aa14.86□□□□□ -0.03
FBXO38-208ENST00000504971 NCBP3Q53F19 620 aaKnown RBP14.79□□□□□ -0.04
FBXO38-208ENST00000504971 C1QBPQ07021 282 aaKnown RBP14.76□□□□□ -0.05
FBXO38-208ENST00000504971 NPM3O75607 178 aaKnown RBP14.62□□□□□ -0.07
FBXO38-208ENST00000504971 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.47□□□□□ -0.092e-6■■□□□ 11.6
FBXO38-208ENST00000504971 U3KPZ7 1027 aaPredicted RBP14.23□□□□□ -0.13
FBXO38-208ENST00000504971 KCNA4P22459 653 aa14.2□□□□□ -0.14
FBXO38-208ENST00000504971 NISCHQ9Y2I1 1504 aa14.17□□□□□ -0.14
FBXO38-208ENST00000504971 SLC4A2P04920 1241 aa14.03□□□□□ -0.16
FBXO38-208ENST00000504971 SPINK5Q9NQ38 1064 aaPredicted RBP14.03□□□□□ -0.16
FBXO38-208ENST00000504971 DSG3P32926 999 aa14□□□□□ -0.17
FBXO38-208ENST00000504971 CAPN15O75808 1086 aa13.96□□□□□ -0.17
FBXO38-208ENST00000504971 APLP2Q06481 763 aa13.77□□□□□ -0.21
FBXO38-208ENST00000504971 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.74□□□□□ -0.21
FBXO38-208ENST00000504971 HNRNPUL2Q1KMD3 747 aaKnown RBP13.74□□□□□ -0.21
FBXO38-208ENST00000504971 ZNF219Q9P2Y4 722 aaPredicted RBP13.73□□□□□ -0.21
FBXO38-208ENST00000504971 TRHP20396 242 aaPredicted RBP13.7□□□□□ -0.22
FBXO38-208ENST00000504971 SAMD1Q6SPF0 538 aaPredicted RBP13.66□□□□□ -0.22
FBXO38-208ENST00000504971 ABCB7O75027 752 aa13.63□□□□□ -0.23
FBXO38-208ENST00000504971 POTEHQ6S545 545 aa13.58□□□□□ -0.24
FBXO38-208ENST00000504971 MYCNP04198 464 aaPredicted RBP13.52□□□□□ -0.25
FBXO38-208ENST00000504971 SLC4A1APQ9BWU0 796 aaKnown RBP13.35□□□□□ -0.27
FBXO38-208ENST00000504971 POLA2Q14181 598 aa13.34□□□□□ -0.27
FBXO38-208ENST00000504971 RBM42Q9BTD8 480 aaKnown RBP13.33□□□□□ -0.28
FBXO38-208ENST00000504971 FOXD4L1Q9NU39 408 aa13.3□□□□□ -0.28
FBXO38-208ENST00000504971 ATF5Q9Y2D1 282 aaPredicted RBP13.22□□□□□ -0.29
FBXO38-208ENST00000504971 SLC24A1O60721 1099 aa13.11□□□□□ -0.31
FBXO38-208ENST00000504971 CHRDL2Q6WN34 429 aa13.1□□□□□ -0.31
FBXO38-208ENST00000504971 ZBTB22O15209 634 aa13.09□□□□□ -0.31
FBXO38-208ENST00000504971 ZBTB12Q9Y330 459 aaPredicted RBP13.08□□□□□ -0.32
FBXO38-208ENST00000504971 AKT1S1Q96B36 256 aa13.02□□□□□ -0.33
FBXO38-208ENST00000504971 ATXN8OSP0DMR3 200 aa12.95□□□□□ -0.34
FBXO38-208ENST00000504971 OSCARQ8IYS5 282 aa12.92□□□□□ -0.34
FBXO38-208ENST00000504971 REM2Q8IYK8 340 aaPredicted RBP12.88□□□□□ -0.35
FBXO38-208ENST00000504971 PIP4P2Q8N4L2 257 aa12.77□□□□□ -0.37
FBXO38-208ENST00000504971 PITPNM1O00562 1244 aa12.75□□□□□ -0.37
FBXO38-208ENST00000504971 FXR2P51116 673 aaKnown RBP eCLIP12.7□□□□□ -0.38
FBXO38-208ENST00000504971 SPDYE2BA6NHP3 402 aa12.68□□□□□ -0.38
FBXO38-208ENST00000504971 SPDYE6P0CI01 402 aa12.68□□□□□ -0.38
FBXO38-208ENST00000504971 SPDYE2Q495Y8 402 aa12.68□□□□□ -0.38
FBXO38-208ENST00000504971 SP7Q8TDD2 431 aaPredicted RBP12.68□□□□□ -0.38
FBXO38-208ENST00000504971 FBLN2P98095 1184 aa12.66□□□□□ -0.38
FBXO38-208ENST00000504971 MKRN4PQ13434 485 aaPredicted RBP12.63□□□□□ -0.39
FBXO38-208ENST00000504971 SSUH2Q9Y2M2 353 aa12.53□□□□□ -0.4
FBXO38-208ENST00000504971 HAX1O00165 279 aa12.5□□□□□ -0.41
FBXO38-208ENST00000504971 MYT1Q01538 1121 aa12.48□□□□□ -0.41
FBXO38-208ENST00000504971 SPDYE1Q8NFV5 336 aaPredicted RBP12.47□□□□□ -0.41
FBXO38-208ENST00000504971 ZNF692Q9BU19 519 aaPredicted RBP12.45□□□□□ -0.42
FBXO38-208ENST00000504971 CCDC180Q9P1Z9 1646 aa12.42□□□□□ -0.42
FBXO38-208ENST00000504971 TTBK1Q5TCY1 1321 aaPredicted RBP12.41□□□□□ -0.42
FBXO38-208ENST00000504971 EVX2Q03828 476 aa12.41□□□□□ -0.42
FBXO38-208ENST00000504971 PRKAR2AP13861 404 aaKnown RBP12.38□□□□□ -0.43
FBXO38-208ENST00000504971 CLEC11AQ9Y240 323 aa12.38□□□□□ -0.43
FBXO38-208ENST00000504971 CSRNP3Q8WYN3 585 aa12.34□□□□□ -0.43
FBXO38-208ENST00000504971 C19orf67A6NJJ6 358 aa12.3□□□□□ -0.44
FBXO38-208ENST00000504971 PABPN1Q86U42 306 aaKnown RBP eCLIP12.28□□□□□ -0.44
FBXO38-208ENST00000504971 PRR29P0C7W0 189 aa12.2□□□□□ -0.46
FBXO38-208ENST00000504971 CHADLQ6NUI6 762 aa12.2□□□□□ -0.46
FBXO38-208ENST00000504971 DAXXQ9UER7 740 aaPredicted RBP12.16□□□□□ -0.46
FBXO38-208ENST00000504971 GABBR2O75899 941 aa12.11□□□□□ -0.47
FBXO38-208ENST00000504971 PELP1Q8IZL8 1130 aaKnown RBP12.11□□□□□ -0.47
FBXO38-208ENST00000504971 FARP1Q9Y4F1 1045 aaPredicted RBP12.05□□□□□ -0.48
FBXO38-208ENST00000504971 EHMT2Q96KQ7 1210 aa12.01□□□□□ -0.49
FBXO38-208ENST00000504971 CD44P16070 742 aaKnown RBP11.99□□□□□ -0.49
FBXO38-208ENST00000504971 CREBZFQ9NS37 354 aa11.92□□□□□ -0.5
FBXO38-208ENST00000504971 STAG3Q9UJ98 1225 aa11.92□□□□□ -0.5
FBXO38-208ENST00000504971 SPDYE4A6NLX3 237 aa11.91□□□□□ -0.5
FBXO38-208ENST00000504971 CLCN6P51797 869 aa11.91□□□□□ -0.5
FBXO38-208ENST00000504971 ZCCHC6Q5VYS8 1495 aaKnown RBP11.9□□□□□ -0.5
FBXO38-208ENST00000504971 POTEIP0CG38 1075 aa11.89□□□□□ -0.51
FBXO38-208ENST00000504971 LHX8Q68G74 356 aa11.87□□□□□ -0.51
FBXO38-208ENST00000504971 ERICH6Q7L0X2 663 aa11.87□□□□□ -0.51
FBXO38-208ENST00000504971 ZNF579Q8NAF0 562 aaKnown RBP11.85□□□□□ -0.51
FBXO38-208ENST00000504971 DCAF1Q9Y4B6 1507 aa11.81□□□□□ -0.52
FBXO38-208ENST00000504971 ZRANB1Q9UGI0 708 aa11.78□□□□□ -0.52
FBXO38-208ENST00000504971 MNX1P50219 401 aaPredicted RBP11.73□□□□□ -0.53
FBXO38-208ENST00000504971 PROM2Q8N271 834 aa11.71□□□□□ -0.53
FBXO38-208ENST00000504971 MYO15BQ96JP2 1530 aa11.7□□□□□ -0.54
FBXO38-208ENST00000504971 DCBLD2Q96PD2 775 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms