RNA–Protein interactions for RNA: ENST00000504859.5

GRAMD2B-204, Transcript of GRAM domain containing 2B, humanhuman

TSL 5

Gene GRAMD2B, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-204ENST00000504859 AEBP2Q6ZN18 517 aaPredicted RBP22.19■■□□□ 1.14
GRAMD2B-204ENST00000504859 CHIC1Q5VXU3 224 aa21.36■■□□□ 1.01
GRAMD2B-204ENST00000504859 PHF23Q9BUL5 403 aaPredicted RBP18.81■□□□□ 0.6
GRAMD2B-204ENST00000504859 SENP3Q9H4L4 574 aaPredicted RBP18.8■□□□□ 0.6
GRAMD2B-204ENST00000504859 FOXD1Q16676 465 aa17.53■□□□□ 0.4
GRAMD2B-204ENST00000504859 PLPPR3Q6T4P5 718 aa17.22■□□□□ 0.35
GRAMD2B-204ENST00000504859 PPP6R1Q9UPN7 881 aa16.7■□□□□ 0.26
GRAMD2B-204ENST00000504859 ADRA2BP18089 450 aa16.66■□□□□ 0.26
GRAMD2B-204ENST00000504859 PIAS4Q8N2W9 510 aaPredicted RBP16.46■□□□□ 0.23
GRAMD2B-204ENST00000504859 MSH5O43196 834 aa16.21■□□□□ 0.19
GRAMD2B-204ENST00000504859 POTEDQ86YR6 584 aa15.26■□□□□ 0.03
GRAMD2B-204ENST00000504859 MAPK8IP2Q13387 824 aaPredicted RBP15.2■□□□□ 0.02
GRAMD2B-204ENST00000504859 PPP4R3CPQ6ZMV5 832 aa15.16■□□□□ 0.02
GRAMD2B-204ENST00000504859 SCAF1Q9H7N4 1312 aaKnown RBP15.15■□□□□ 0.02
GRAMD2B-204ENST00000504859 DMRT2Q9Y5R5 561 aa14.98□□□□□ -0.01
GRAMD2B-204ENST00000504859 CNKSR2Q8WXI2 1034 aa14.77□□□□□ -0.05
GRAMD2B-204ENST00000504859 NCBP3Q53F19 620 aaKnown RBP14.65□□□□□ -0.06
GRAMD2B-204ENST00000504859 KCNA4P22459 653 aa14.56□□□□□ -0.08
GRAMD2B-204ENST00000504859 HOXD11P31277 338 aaPredicted RBP14.56□□□□□ -0.08
GRAMD2B-204ENST00000504859 RNF216Q9NWF9 866 aaPredicted RBP14.54□□□□□ -0.08
GRAMD2B-204ENST00000504859 NPM3O75607 178 aaKnown RBP14.5□□□□□ -0.09
GRAMD2B-204ENST00000504859 DCAF8L1A6NGE4 600 aa14.38□□□□□ -0.11
GRAMD2B-204ENST00000504859 DNAJC5BQ9UF47 199 aa14.03□□□□□ -0.16
GRAMD2B-204ENST00000504859 RNF39Q9H2S5 420 aa13.9□□□□□ -0.18
GRAMD2B-204ENST00000504859 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.89□□□□□ -0.19
GRAMD2B-204ENST00000504859 SLC4A1APQ9BWU0 796 aaKnown RBP13.78□□□□□ -0.2
GRAMD2B-204ENST00000504859 SLC4A2P04920 1241 aa13.76□□□□□ -0.21
GRAMD2B-204ENST00000504859 CACNB1Q02641 598 aaPredicted RBP13.72□□□□□ -0.21
GRAMD2B-204ENST00000504859 C1QBPQ07021 282 aaKnown RBP13.69□□□□□ -0.22
GRAMD2B-204ENST00000504859 U3KPZ7 1027 aaPredicted RBP13.65□□□□□ -0.22
GRAMD2B-204ENST00000504859 FOXD4L1Q9NU39 408 aa13.42□□□□□ -0.26
GRAMD2B-204ENST00000504859 ZBTB22O15209 634 aa13.41□□□□□ -0.26
GRAMD2B-204ENST00000504859 SPINK5Q9NQ38 1064 aaPredicted RBP13.38□□□□□ -0.27
GRAMD2B-204ENST00000504859 MYCNP04198 464 aaPredicted RBP13.36□□□□□ -0.27
GRAMD2B-204ENST00000504859 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.32□□□□□ -0.28
GRAMD2B-204ENST00000504859 HNRNPUL2Q1KMD3 747 aaKnown RBP13.32□□□□□ -0.28
GRAMD2B-204ENST00000504859 CAPN15O75808 1086 aa13.31□□□□□ -0.28
GRAMD2B-204ENST00000504859 SAMD1Q6SPF0 538 aaPredicted RBP13.28□□□□□ -0.28
GRAMD2B-204ENST00000504859 APLP2Q06481 763 aa13.22□□□□□ -0.29
GRAMD2B-204ENST00000504859 TRHP20396 242 aaPredicted RBP13.19□□□□□ -0.3
GRAMD2B-204ENST00000504859 EHMT2Q96KQ7 1210 aa13.15□□□□□ -0.3
GRAMD2B-204ENST00000504859 DSG3P32926 999 aa13.14□□□□□ -0.31
GRAMD2B-204ENST00000504859 ZNF219Q9P2Y4 722 aaPredicted RBP13.13□□□□□ -0.31
GRAMD2B-204ENST00000504859 CSRNP3Q8WYN3 585 aa13.09□□□□□ -0.31
GRAMD2B-204ENST00000504859 ATF5Q9Y2D1 282 aaPredicted RBP13.09□□□□□ -0.31
GRAMD2B-204ENST00000504859 ABCB7O75027 752 aa13.06□□□□□ -0.32
GRAMD2B-204ENST00000504859 ATXN8OSP0DMR3 200 aa12.95□□□□□ -0.34
GRAMD2B-204ENST00000504859 POLA2Q14181 598 aa12.91□□□□□ -0.34
GRAMD2B-204ENST00000504859 ZBTB12Q9Y330 459 aaPredicted RBP12.62□□□□□ -0.39
GRAMD2B-204ENST00000504859 MKRN4PQ13434 485 aaPredicted RBP12.5□□□□□ -0.41
GRAMD2B-204ENST00000504859 OSCARQ8IYS5 282 aa12.5□□□□□ -0.41
GRAMD2B-204ENST00000504859 FBLN2P98095 1184 aa12.48□□□□□ -0.41
GRAMD2B-204ENST00000504859 RBM42Q9BTD8 480 aaKnown RBP12.48□□□□□ -0.41
GRAMD2B-204ENST00000504859 AKT1S1Q96B36 256 aa12.29□□□□□ -0.44
GRAMD2B-204ENST00000504859 SPDYE2BA6NHP3 402 aa12.28□□□□□ -0.44
GRAMD2B-204ENST00000504859 SPDYE6P0CI01 402 aa12.28□□□□□ -0.44
GRAMD2B-204ENST00000504859 SPDYE2Q495Y8 402 aa12.28□□□□□ -0.44
GRAMD2B-204ENST00000504859 ZNF692Q9BU19 519 aaPredicted RBP12.22□□□□□ -0.45
GRAMD2B-204ENST00000504859 REM2Q8IYK8 340 aaPredicted RBP12.2□□□□□ -0.46
GRAMD2B-204ENST00000504859 SSUH2Q9Y2M2 353 aa12.18□□□□□ -0.46
GRAMD2B-204ENST00000504859 CHRDL2Q6WN34 429 aa12.11□□□□□ -0.47
GRAMD2B-204ENST00000504859 PITPNM1O00562 1244 aa12.08□□□□□ -0.48
GRAMD2B-204ENST00000504859 SPDYE4A6NLX3 237 aa12.06□□□□□ -0.48
GRAMD2B-204ENST00000504859 PABPN1Q86U42 306 aaKnown RBP eCLIP12.06□□□□□ -0.48
GRAMD2B-204ENST00000504859 POTEHQ6S545 545 aa12.03□□□□□ -0.48
GRAMD2B-204ENST00000504859 SPDYE1Q8NFV5 336 aaPredicted RBP11.98□□□□□ -0.49
GRAMD2B-204ENST00000504859 CLEC11AQ9Y240 323 aa11.98□□□□□ -0.49
GRAMD2B-204ENST00000504859 PIP4P2Q8N4L2 257 aa11.91□□□□□ -0.5
GRAMD2B-204ENST00000504859 FXR2P51116 673 aaKnown RBP eCLIP11.87□□□□□ -0.51
GRAMD2B-204ENST00000504859 FKBP8Q14318 412 aa11.85□□□□□ -0.51
GRAMD2B-204ENST00000504859 PRR29P0C7W0 189 aa11.81□□□□□ -0.52
GRAMD2B-204ENST00000504859 PROM2Q8N271 834 aa11.81□□□□□ -0.52
GRAMD2B-204ENST00000504859 PRKAR2AP13861 404 aaKnown RBP11.76□□□□□ -0.53
GRAMD2B-204ENST00000504859 CHADLQ6NUI6 762 aa11.74□□□□□ -0.53
GRAMD2B-204ENST00000504859 STAG3Q9UJ98 1225 aa11.74□□□□□ -0.53
GRAMD2B-204ENST00000504859 CREBZFQ9NS37 354 aa11.62□□□□□ -0.55
GRAMD2B-204ENST00000504859 HAX1O00165 279 aa11.59□□□□□ -0.55
GRAMD2B-204ENST00000504859 FARP1Q9Y4F1 1045 aaPredicted RBP11.57□□□□□ -0.56
GRAMD2B-204ENST00000504859 EVX2Q03828 476 aa11.52□□□□□ -0.57
GRAMD2B-204ENST00000504859 C19orf67A6NJJ6 358 aa11.48□□□□□ -0.57
GRAMD2B-204ENST00000504859 MNX1P50219 401 aaPredicted RBP11.48□□□□□ -0.57
GRAMD2B-204ENST00000504859 MIER1Q8N108 512 aa11.47□□□□□ -0.57
GRAMD2B-204ENST00000504859 SP7Q8TDD2 431 aaPredicted RBP11.43□□□□□ -0.58
GRAMD2B-204ENST00000504859 FBXO3Q9UK99 471 aa11.43□□□□□ -0.58
GRAMD2B-204ENST00000504859 PLCD3Q8N3E9 789 aa11.42□□□□□ -0.58
GRAMD2B-204ENST00000504859 CD44P16070 742 aaKnown RBP11.41□□□□□ -0.58
GRAMD2B-204ENST00000504859 PLEKHG5O94827 1062 aa11.37□□□□□ -0.59
GRAMD2B-204ENST00000504859 NPM1P06748 294 aaKnown RBP eCLIP11.37□□□□□ -0.59
GRAMD2B-204ENST00000504859 VASPP50552 380 aaPredicted RBP11.33□□□□□ -0.6
GRAMD2B-204ENST00000504859 ZRANB1Q9UGI0 708 aa11.3□□□□□ -0.6
GRAMD2B-204ENST00000504859 PAK3O75914 559 aaPredicted RBP11.25□□□□□ -0.61
GRAMD2B-204ENST00000504859 ZBTB47Q9UFB7 747 aaPredicted RBP11.25□□□□□ -0.61
GRAMD2B-204ENST00000504859 RASEFQ8IZ41 740 aa11.24□□□□□ -0.61
GRAMD2B-204ENST00000504859 TSPYL2Q9H2G4 693 aaPredicted RBP11.24□□□□□ -0.61
GRAMD2B-204ENST00000504859 GABBR2O75899 941 aa11.23□□□□□ -0.61
GRAMD2B-204ENST00000504859 ZNF579Q8NAF0 562 aaKnown RBP11.23□□□□□ -0.61
GRAMD2B-204ENST00000504859 NUBP1P53384 320 aa11.21□□□□□ -0.61
GRAMD2B-204ENST00000504859 KLHL34Q8N239 644 aa11.2□□□□□ -0.62
GRAMD2B-204ENST00000504859 PHF12Q96QT6 1004 aa11.2□□□□□ -0.62
GRAMD2B-204ENST00000504859 IFNLR1Q8IU57 520 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 290.2 ms