RNA–Protein interactions for RNA: ENST00000504839.1

WDFY3-205, Transcript of WD repeat and FYVE domain containing 3, humanhuman

TSL 5

Gene WDFY3, Length 677 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDFY3-205ENST00000504839 AEBP2Q6ZN18 517 aaPredicted RBP18.85■□□□□ 0.61
WDFY3-205ENST00000504839 CHIC1Q5VXU3 224 aa18■□□□□ 0.47
WDFY3-205ENST00000504839 SENP3Q9H4L4 574 aaPredicted RBP15.93■□□□□ 0.14
WDFY3-205ENST00000504839 PHF23Q9BUL5 403 aaPredicted RBP15.88■□□□□ 0.13
WDFY3-205ENST00000504839 FOXD1Q16676 465 aa14.9□□□□□ -0.02
WDFY3-205ENST00000504839 PLPPR3Q6T4P5 718 aa14.44□□□□□ -0.1
WDFY3-205ENST00000504839 PPP6R1Q9UPN7 881 aa14.14□□□□□ -0.15
WDFY3-205ENST00000504839 ADRA2BP18089 450 aa14.11□□□□□ -0.15
WDFY3-205ENST00000504839 PIAS4Q8N2W9 510 aaPredicted RBP13.97□□□□□ -0.17
WDFY3-205ENST00000504839 MSH5O43196 834 aa13.76□□□□□ -0.21
WDFY3-205ENST00000504839 POTEDQ86YR6 584 aa13.19□□□□□ -0.3
WDFY3-205ENST00000504839 MAPK8IP2Q13387 824 aaPredicted RBP12.91□□□□□ -0.34
WDFY3-205ENST00000504839 SCAF1Q9H7N4 1312 aaKnown RBP12.74□□□□□ -0.37
WDFY3-205ENST00000504839 PPP4R3CPQ6ZMV5 832 aa12.73□□□□□ -0.37
WDFY3-205ENST00000504839 DMRT2Q9Y5R5 561 aa12.68□□□□□ -0.38
WDFY3-205ENST00000504839 CNKSR2Q8WXI2 1034 aa12.4□□□□□ -0.42
WDFY3-205ENST00000504839 HOXD11P31277 338 aaPredicted RBP12.28□□□□□ -0.44
WDFY3-205ENST00000504839 NCBP3Q53F19 620 aaKnown RBP12.23□□□□□ -0.45
WDFY3-205ENST00000504839 RNF216Q9NWF9 866 aaPredicted RBP12.23□□□□□ -0.45
WDFY3-205ENST00000504839 DCAF8L1A6NGE4 600 aa12.22□□□□□ -0.45
WDFY3-205ENST00000504839 NPM3O75607 178 aaKnown RBP12.15□□□□□ -0.46
WDFY3-205ENST00000504839 KCNA4P22459 653 aa12.14□□□□□ -0.47
WDFY3-205ENST00000504839 RNF39Q9H2S5 420 aa11.82□□□□□ -0.52
WDFY3-205ENST00000504839 CACNB1Q02641 598 aaPredicted RBP11.75□□□□□ -0.53
WDFY3-205ENST00000504839 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.73□□□□□ -0.53
WDFY3-205ENST00000504839 DNAJC5BQ9UF47 199 aa11.71□□□□□ -0.53
WDFY3-205ENST00000504839 C1QBPQ07021 282 aaKnown RBP11.6□□□□□ -0.55
WDFY3-205ENST00000504839 SLC4A2P04920 1241 aa11.57□□□□□ -0.56
WDFY3-205ENST00000504839 U3KPZ7 1027 aaPredicted RBP11.54□□□□□ -0.56
WDFY3-205ENST00000504839 SLC4A1APQ9BWU0 796 aaKnown RBP11.45□□□□□ -0.58
WDFY3-205ENST00000504839 SPINK5Q9NQ38 1064 aaPredicted RBP11.35□□□□□ -0.59
WDFY3-205ENST00000504839 CAPN15O75808 1086 aa11.27□□□□□ -0.61
WDFY3-205ENST00000504839 ZBTB22O15209 634 aa11.2□□□□□ -0.62
WDFY3-205ENST00000504839 MYCNP04198 464 aaPredicted RBP11.18□□□□□ -0.62
WDFY3-205ENST00000504839 FOXD4L1Q9NU39 408 aa11.18□□□□□ -0.62
WDFY3-205ENST00000504839 TRHP20396 242 aaPredicted RBP11.16□□□□□ -0.62
WDFY3-205ENST00000504839 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.15□□□□□ -0.62
WDFY3-205ENST00000504839 DSG3P32926 999 aa11.15□□□□□ -0.62
WDFY3-205ENST00000504839 HNRNPUL2Q1KMD3 747 aaKnown RBP11.15□□□□□ -0.62
WDFY3-205ENST00000504839 SAMD1Q6SPF0 538 aaPredicted RBP11.13□□□□□ -0.63
WDFY3-205ENST00000504839 ABCB7O75027 752 aa11.09□□□□□ -0.63
WDFY3-205ENST00000504839 APLP2Q06481 763 aa11.07□□□□□ -0.64
WDFY3-205ENST00000504839 ZNF219Q9P2Y4 722 aaPredicted RBP11.05□□□□□ -0.64
WDFY3-205ENST00000504839 ATF5Q9Y2D1 282 aaPredicted RBP11.02□□□□□ -0.65
WDFY3-205ENST00000504839 POLA2Q14181 598 aa10.9□□□□□ -0.66
WDFY3-205ENST00000504839 EHMT2Q96KQ7 1210 aa10.84□□□□□ -0.67
WDFY3-205ENST00000504839 CSRNP3Q8WYN3 585 aa10.82□□□□□ -0.68
WDFY3-205ENST00000504839 ATXN8OSP0DMR3 200 aa10.75□□□□□ -0.69
WDFY3-205ENST00000504839 ZBTB12Q9Y330 459 aaPredicted RBP10.57□□□□□ -0.72
WDFY3-205ENST00000504839 OSCARQ8IYS5 282 aa10.56□□□□□ -0.72
WDFY3-205ENST00000504839 RBM42Q9BTD8 480 aaKnown RBP10.54□□□□□ -0.72
WDFY3-205ENST00000504839 MKRN4PQ13434 485 aaPredicted RBP10.5□□□□□ -0.73
WDFY3-205ENST00000504839 FBLN2P98095 1184 aa10.44□□□□□ -0.74
WDFY3-205ENST00000504839 AKT1S1Q96B36 256 aa10.37□□□□□ -0.75
WDFY3-205ENST00000504839 POTEHQ6S545 545 aa10.36□□□□□ -0.75
WDFY3-205ENST00000504839 REM2Q8IYK8 340 aaPredicted RBP10.33□□□□□ -0.76
WDFY3-205ENST00000504839 CHRDL2Q6WN34 429 aa10.32□□□□□ -0.76
WDFY3-205ENST00000504839 SPDYE2BA6NHP3 402 aa10.3□□□□□ -0.76
WDFY3-205ENST00000504839 SPDYE6P0CI01 402 aa10.3□□□□□ -0.76
WDFY3-205ENST00000504839 SPDYE2Q495Y8 402 aa10.3□□□□□ -0.76
WDFY3-205ENST00000504839 ZNF692Q9BU19 519 aaPredicted RBP10.26□□□□□ -0.77
WDFY3-205ENST00000504839 PITPNM1O00562 1244 aa10.25□□□□□ -0.77
WDFY3-205ENST00000504839 SSUH2Q9Y2M2 353 aa10.22□□□□□ -0.77
WDFY3-205ENST00000504839 PABPN1Q86U42 306 aaKnown RBP eCLIP10.14□□□□□ -0.79
WDFY3-205ENST00000504839 PIP4P2Q8N4L2 257 aa10.13□□□□□ -0.79
WDFY3-205ENST00000504839 CLEC11AQ9Y240 323 aa10.13□□□□□ -0.79
WDFY3-205ENST00000504839 SPDYE1Q8NFV5 336 aaPredicted RBP10.08□□□□□ -0.8
WDFY3-205ENST00000504839 SPDYE4A6NLX3 237 aa10.06□□□□□ -0.8
WDFY3-205ENST00000504839 FXR2P51116 673 aaKnown RBP eCLIP10.06□□□□□ -0.83e-6■■■■□ 25.3
WDFY3-205ENST00000504839 PRKAR2AP13861 404 aaKnown RBP9.97□□□□□ -0.81
WDFY3-205ENST00000504839 CHADLQ6NUI6 762 aa9.95□□□□□ -0.82
WDFY3-205ENST00000504839 PRR29P0C7W0 189 aa9.94□□□□□ -0.82
WDFY3-205ENST00000504839 HAX1O00165 279 aa9.89□□□□□ -0.83
WDFY3-205ENST00000504839 EVX2Q03828 476 aa9.86□□□□□ -0.83
WDFY3-205ENST00000504839 PROM2Q8N271 834 aa9.82□□□□□ -0.84
WDFY3-205ENST00000504839 FKBP8Q14318 412 aa9.8□□□□□ -0.84
WDFY3-205ENST00000504839 SP7Q8TDD2 431 aaPredicted RBP9.79□□□□□ -0.84
WDFY3-205ENST00000504839 STAG3Q9UJ98 1225 aa9.79□□□□□ -0.84
WDFY3-205ENST00000504839 CREBZFQ9NS37 354 aa9.78□□□□□ -0.84
WDFY3-205ENST00000504839 FARP1Q9Y4F1 1045 aaPredicted RBP9.76□□□□□ -0.85
WDFY3-205ENST00000504839 C19orf67A6NJJ6 358 aa9.74□□□□□ -0.85
WDFY3-205ENST00000504839 CD44P16070 742 aaKnown RBP9.65□□□□□ -0.86
WDFY3-205ENST00000504839 MNX1P50219 401 aaPredicted RBP9.65□□□□□ -0.86
WDFY3-205ENST00000504839 GABBR2O75899 941 aa9.57□□□□□ -0.88
WDFY3-205ENST00000504839 MIER1Q8N108 512 aa9.57□□□□□ -0.88
WDFY3-205ENST00000504839 ZRANB1Q9UGI0 708 aa9.55□□□□□ -0.88
WDFY3-205ENST00000504839 NPM1P06748 294 aaKnown RBP eCLIP9.52□□□□□ -0.89
WDFY3-205ENST00000504839 PLCD3Q8N3E9 789 aa9.52□□□□□ -0.89
WDFY3-205ENST00000504839 ZNF579Q8NAF0 562 aaKnown RBP9.49□□□□□ -0.89
WDFY3-205ENST00000504839 PHF12Q96QT6 1004 aa9.49□□□□□ -0.89
WDFY3-205ENST00000504839 TSPYL2Q9H2G4 693 aaPredicted RBP9.47□□□□□ -0.89
WDFY3-205ENST00000504839 PAK3O75914 559 aaPredicted RBP9.45□□□□□ -0.9
WDFY3-205ENST00000504839 PLEKHG5O94827 1062 aa9.45□□□□□ -0.9
WDFY3-205ENST00000504839 RASEFQ8IZ41 740 aa9.44□□□□□ -0.9
WDFY3-205ENST00000504839 GALR2O43603 387 aaPredicted RBP9.43□□□□□ -0.9
WDFY3-205ENST00000504839 FBXO3Q9UK99 471 aa9.42□□□□□ -0.9
WDFY3-205ENST00000504839 POTEIP0CG38 1075 aa9.41□□□□□ -0.9
WDFY3-205ENST00000504839 VASPP50552 380 aaPredicted RBP9.39□□□□□ -0.91
WDFY3-205ENST00000504839 NUBP1P53384 320 aa9.37□□□□□ -0.91
WDFY3-205ENST00000504839 CCDC61Q9Y6R9 512 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms