RNA–Protein interactions for RNA: ENST00000504521.5

ATR-202, Transcript of ATR serine/threonine kinase, humanhuman

TSL 2

Gene ATR, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-202ENST00000504521 AEBP2Q6ZN18 517 aaPredicted RBP25■■□□□ 1.59
ATR-202ENST00000504521 CHIC1Q5VXU3 224 aa23.4■■□□□ 1.34
ATR-202ENST00000504521 SENP3Q9H4L4 574 aaPredicted RBP21.45■■□□□ 1.02
ATR-202ENST00000504521 PHF23Q9BUL5 403 aaPredicted RBP21.08■□□□□ 0.97
ATR-202ENST00000504521 FOXD1Q16676 465 aa20.04■□□□□ 0.8
ATR-202ENST00000504521 POTEDQ86YR6 584 aa19.47■□□□□ 0.71
ATR-202ENST00000504521 MSH5O43196 834 aa18.99■□□□□ 0.63
ATR-202ENST00000504521 PIAS4Q8N2W9 510 aaPredicted RBP18.61■□□□□ 0.57
ATR-202ENST00000504521 PLPPR3Q6T4P5 718 aa18.32■□□□□ 0.52
ATR-202ENST00000504521 PPP6R1Q9UPN7 881 aa18.29■□□□□ 0.52
ATR-202ENST00000504521 ADRA2BP18089 450 aa18.22■□□□□ 0.51
ATR-202ENST00000504521 DMRT2Q9Y5R5 561 aa16.91■□□□□ 0.3
ATR-202ENST00000504521 MAPK8IP2Q13387 824 aaPredicted RBP16.9■□□□□ 0.3
ATR-202ENST00000504521 SCAF1Q9H7N4 1312 aaKnown RBP16.71■□□□□ 0.27
ATR-202ENST00000504521 CACNB1Q02641 598 aaPredicted RBP16.65■□□□□ 0.26
ATR-202ENST00000504521 DCAF8L1A6NGE4 600 aa16.29■□□□□ 0.2
ATR-202ENST00000504521 RNF39Q9H2S5 420 aa16.14■□□□□ 0.17
ATR-202ENST00000504521 HOXD11P31277 338 aaPredicted RBP16.06■□□□□ 0.16
ATR-202ENST00000504521 PPP4R3CPQ6ZMV5 832 aa15.97■□□□□ 0.15
ATR-202ENST00000504521 C1QBPQ07021 282 aaKnown RBP15.88■□□□□ 0.13
ATR-202ENST00000504521 CNKSR2Q8WXI2 1034 aa15.8■□□□□ 0.12
ATR-202ENST00000504521 RNF216Q9NWF9 866 aaPredicted RBP15.8■□□□□ 0.12
ATR-202ENST00000504521 DNAJC5BQ9UF47 199 aa15.61■□□□□ 0.09
ATR-202ENST00000504521 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.34■□□□□ 0.05
ATR-202ENST00000504521 NCBP3Q53F19 620 aaKnown RBP15.21■□□□□ 0.03
ATR-202ENST00000504521 POTEHQ6S545 545 aa15.16■□□□□ 0.02
ATR-202ENST00000504521 NPM3O75607 178 aaKnown RBP14.96□□□□□ -0.01
ATR-202ENST00000504521 U3KPZ7 1027 aaPredicted RBP14.93□□□□□ -0.02
ATR-202ENST00000504521 DSG3P32926 999 aa14.92□□□□□ -0.02
ATR-202ENST00000504521 CAPN15O75808 1086 aa14.91□□□□□ -0.02
ATR-202ENST00000504521 SPINK5Q9NQ38 1064 aaPredicted RBP14.88□□□□□ -0.03
ATR-202ENST00000504521 TRHP20396 242 aaPredicted RBP14.53□□□□□ -0.08
ATR-202ENST00000504521 ABCB7O75027 752 aa14.5□□□□□ -0.09
ATR-202ENST00000504521 APLP2Q06481 763 aa14.49□□□□□ -0.09
ATR-202ENST00000504521 ZNF219Q9P2Y4 722 aaPredicted RBP14.48□□□□□ -0.09
ATR-202ENST00000504521 SLC4A2P04920 1241 aa14.42□□□□□ -0.1
ATR-202ENST00000504521 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.34□□□□□ -0.11
ATR-202ENST00000504521 HNRNPUL2Q1KMD3 747 aaKnown RBP14.34□□□□□ -0.11
ATR-202ENST00000504521 RBM42Q9BTD8 480 aaKnown RBP14.29□□□□□ -0.12
ATR-202ENST00000504521 SAMD1Q6SPF0 538 aaPredicted RBP14.22□□□□□ -0.13
ATR-202ENST00000504521 KCNA4P22459 653 aa14.18□□□□□ -0.14
ATR-202ENST00000504521 CHRDL2Q6WN34 429 aa14.18□□□□□ -0.14
ATR-202ENST00000504521 POLA2Q14181 598 aa14□□□□□ -0.17
ATR-202ENST00000504521 SP7Q8TDD2 431 aaPredicted RBP13.95□□□□□ -0.18
ATR-202ENST00000504521 MYCNP04198 464 aaPredicted RBP13.86□□□□□ -0.19
ATR-202ENST00000504521 AKT1S1Q96B36 256 aa13.82□□□□□ -0.2
ATR-202ENST00000504521 PIP4P2Q8N4L2 257 aa13.72□□□□□ -0.21
ATR-202ENST00000504521 REM2Q8IYK8 340 aaPredicted RBP13.69□□□□□ -0.22
ATR-202ENST00000504521 ZBTB12Q9Y330 459 aaPredicted RBP13.69□□□□□ -0.22
ATR-202ENST00000504521 HAX1O00165 279 aa13.65□□□□□ -0.22
ATR-202ENST00000504521 OSCARQ8IYS5 282 aa13.59□□□□□ -0.23
ATR-202ENST00000504521 ATF5Q9Y2D1 282 aaPredicted RBP13.56□□□□□ -0.24
ATR-202ENST00000504521 PITPNM1O00562 1244 aa13.55□□□□□ -0.24
ATR-202ENST00000504521 FXR2P51116 673 aaKnown RBP eCLIP13.53□□□□□ -0.24
ATR-202ENST00000504521 FOXD4L1Q9NU39 408 aa13.42□□□□□ -0.26
ATR-202ENST00000504521 EVX2Q03828 476 aa13.39□□□□□ -0.27
ATR-202ENST00000504521 SLC4A1APQ9BWU0 796 aaKnown RBP13.29□□□□□ -0.28
ATR-202ENST00000504521 SPDYE2BA6NHP3 402 aa13.21□□□□□ -0.29
ATR-202ENST00000504521 SPDYE6P0CI01 402 aa13.21□□□□□ -0.29
ATR-202ENST00000504521 PRKAR2AP13861 404 aaKnown RBP13.21□□□□□ -0.29
ATR-202ENST00000504521 SPDYE2Q495Y8 402 aa13.21□□□□□ -0.29
ATR-202ENST00000504521 CLEC11AQ9Y240 323 aa13.14□□□□□ -0.31
ATR-202ENST00000504521 FBLN2P98095 1184 aa13.13□□□□□ -0.31
ATR-202ENST00000504521 SPDYE1Q8NFV5 336 aaPredicted RBP13.13□□□□□ -0.31
ATR-202ENST00000504521 C19orf67A6NJJ6 358 aa13.12□□□□□ -0.31
ATR-202ENST00000504521 GABBR2O75899 941 aa13.08□□□□□ -0.32
ATR-202ENST00000504521 LHX8Q68G74 356 aa13.08□□□□□ -0.32
ATR-202ENST00000504521 ATXN8OSP0DMR3 200 aa13.06□□□□□ -0.32
ATR-202ENST00000504521 ZBTB22O15209 634 aa13□□□□□ -0.33
ATR-202ENST00000504521 ZNF692Q9BU19 519 aaPredicted RBP12.97□□□□□ -0.33
ATR-202ENST00000504521 SSUH2Q9Y2M2 353 aa12.95□□□□□ -0.34
ATR-202ENST00000504521 CHADLQ6NUI6 762 aa12.93□□□□□ -0.34
ATR-202ENST00000504521 MKRN4PQ13434 485 aaPredicted RBP12.91□□□□□ -0.34
ATR-202ENST00000504521 PRR29P0C7W0 189 aa12.84□□□□□ -0.35
ATR-202ENST00000504521 POTEIP0CG38 1075 aa12.78□□□□□ -0.36
ATR-202ENST00000504521 CD44P16070 742 aaKnown RBP12.76□□□□□ -0.37
ATR-202ENST00000504521 PABPN1Q86U42 306 aaKnown RBP eCLIP12.76□□□□□ -0.37
ATR-202ENST00000504521 PLSCR2Q9NRY7 297 aa12.74□□□□□ -0.37
ATR-202ENST00000504521 CLCN6P51797 869 aa12.69□□□□□ -0.38
ATR-202ENST00000504521 FARP1Q9Y4F1 1045 aaPredicted RBP12.68□□□□□ -0.38
ATR-202ENST00000504521 DCBLD2Q96PD2 775 aa12.64□□□□□ -0.39
ATR-202ENST00000504521 ZNF579Q8NAF0 562 aaKnown RBP12.52□□□□□ -0.41
ATR-202ENST00000504521 ZRANB1Q9UGI0 708 aa12.49□□□□□ -0.41
ATR-202ENST00000504521 OTUD5Q96G74 571 aa12.42□□□□□ -0.42
ATR-202ENST00000504521 GALR2O43603 387 aaPredicted RBP12.4□□□□□ -0.42
ATR-202ENST00000504521 CREBZFQ9NS37 354 aa12.36□□□□□ -0.43
ATR-202ENST00000504521 POTEMA6NI47 508 aa12.35□□□□□ -0.43
ATR-202ENST00000504521 POTEB2H3BUK9 544 aa12.34□□□□□ -0.43
ATR-202ENST00000504521 POTEGQ6S5H5 508 aa12.3□□□□□ -0.44
ATR-202ENST00000504521 STAG3Q9UJ98 1225 aa12.3□□□□□ -0.44
ATR-202ENST00000504521 PAK3O75914 559 aaPredicted RBP12.29□□□□□ -0.44
ATR-202ENST00000504521 PHF12Q96QT6 1004 aa12.26□□□□□ -0.45
ATR-202ENST00000504521 PELP1Q8IZL8 1130 aaKnown RBP12.21□□□□□ -0.45
ATR-202ENST00000504521 PCDH10Q9P2E7 1040 aa12.18□□□□□ -0.46
ATR-202ENST00000504521 NPM1P06748 294 aaKnown RBP eCLIP12.15□□□□□ -0.46
ATR-202ENST00000504521 METRNQ9UJH8 293 aa12.14□□□□□ -0.47
ATR-202ENST00000504521 ASTLQ6HA08 431 aaPredicted RBP12.11□□□□□ -0.47
ATR-202ENST00000504521 C7P10643 843 aa12.1□□□□□ -0.47
ATR-202ENST00000504521 SLC39A7Q92504 469 aa12.1□□□□□ -0.47
ATR-202ENST00000504521 MAMSTRQ6ZN01 415 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms